Pseudochaenichthys georgianus (South Georgia icefish): 117455071
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Entry
117455071 CDS
T09629
Symbol
trappc9
Name
(RefSeq) trafficking protein particle complex subunit 9
KO
K20306
trafficking protein particle complex subunit 9
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117455071 (trappc9)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117455071 (trappc9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
DUF2393
Vps23_core
Motif
Other DBs
NCBI-GeneID:
117455071
NCBI-ProteinID:
XP_033950315
LinkDB
All DBs
Position
11:complement(32273810..32612978)
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AA seq
1149 aa
AA seq
DB search
MSVPDYMQCAEDHQTVLVVVQPVGIVPEDQFFKIYKRISSVSQVNIRDSQRLLYIRYRHH
YLPENNEWGDFQTHRKVVGLISITTCGSTKEWPQTAERFHGQKEVYSSTLYDSRLLVFGL
QGDIAEQQRTDVAFYPSFEDCPDVEKRVDDFVESIFIVLESKRLDRATDKSGDKTPLLCV
PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMSVELLRGVNDFL
WLGAALEGLCSASVIFHYPGGTAGKKAGRKPSVSQPADSGKRHRPGAQEVLIDPGALTAN
GISADTSTEIGRAKNCLSAEDIIEKYKEAISYYGKYKNAGVIELEACVKAVRVLAIQKRA
REASEFLQNAVYINLGQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPTIP
EPGWRACYKLLLETLPGYSLSLDPKDFSKGTHCGWAAVQMRLLHELVYASRRMGNPGLSV
RHLSFLLQTMLDFLSDQEKKEVTQSLENYTSKCPGGMEVITLPDGLKLPPVPFTKLPIVR
SVKLLNLPLSLRPHKVKGLLGQNMSTASPFIYSPIIIHNRGEERSKKIEFQWVQGDVCEV
QLMVYNPMPYELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPRTAGNITVNG
YHTSVFGVTSDCLLEGLTSVKTSGCLVEVIPSLPRLQLSTSLPRSAHTPQPTSKEELSST
VSVQLFNGEMQPLTITLENIGSEDIETLELTSKTTTTKEKVFGEFLSWDLDEALSHLPLK
CGQALTLTVRIKVKLDFSGQESLLQDLNDDGISLTGLPINSPLRHVLKPRSENKTVGSES
GRAEYSHIKSLDAVLNFKYSGGAGNVEGYYRELSLGIHVDVEPSVFFTRVNTLPATSTRQ
CHLLLDIFNPTEHELTVSAKNNQDLVLHASECQRMAIQVDKFDFETLPQPDQETARFTNP
KQLEEERQHAQGCQINSNLGICWSIPSLRRSGEASVEGVLNQLVLEHLQLAPLQWDVLVN
GKPCDCDVVADCRSGDAVSLEVQLTNLSKNSVGPLALTVVPYQDYQNGVQNYELEDAVTF
IGSSTFYIDTVKPKESSVCVGALLFLYTGDFYLNIKFQGDSAGRDLPLAWFTLPSVHIRA
LEPPQQAGA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcccagactacatgcagtgtgccgaggaccaccagacggttctagtcgtcgtc
cagccggtgggcatcgtccccgaggaccagttcttcaagatctacaaacgcatctccagc
gtgagccaggtgaacatcagggactctcagcggctcctctacatccgctaccgccaccac
tacctgcccgaaaacaacgagtggggggacttccagacgcatcgtaaagtagtgggtctc
atctccatcaccacctgcggttctaccaaagaatggccccaaactgcggagcgtttccac
gggcagaaggaggtgtacagctccacgctctacgactcgcggctgctggtgttcgggctg
cagggagacatcgcagagcagcagaggacagacgtggccttctaccccagctttgaagac
tgccccgacgtggagaagagggtggatgactttgtggagtccatctttattgtgttggag
tccaagaggctcgaccgggccacagacaagtccggtgacaagacccctctgctttgtgtg
ccctttgagaagaaggactttgtgggtttggacacggatagcaggcattataagaagcgc
tgccagggccggatgaggaagcatgtcggggacctgtgtctccaggcgggcatgttgcag
gacgccctggtccactaccacatgtctgtggagctgctccggggggtcaacgacttcctg
tggctgggggctgcgttggagggtttgtgttcagcctcggtcatattccattacccagga
ggcacggcggggaagaaagcgggacgcaagccgagcgtctctcagccggctgacagcggg
aaacgccaccgaccaggggctcaggaggttctcattgacccaggcgccctcactgcgaat
ggcatcagtgcggacacgagcactgagatcggacgagccaagaactgcctgagtgccgag
gacatcatcgagaaatacaaggaggccatctcctactatgggaagtataagaacgccggt
gtgatcgagctggaggcgtgcgtgaaggcggtccgggtgctcgccatccagaagcgagcg
agggaggcctccgagttcctgcagaacgccgtctacatcaatctgggacagctatcagag
gaggagaagatccagcgctacagcatcctgtcggagctctacgaactcatcggctttcat
cgcaagtctgcgttttttaagcgcgtggcggccatgcaatgtgtggcccccaccatccca
gagcccggctggagggcctgctacaagctgctgctggagaccctgcccggatacagcctc
tccctggaccccaaggacttcagcaaaggaacccactgcggctgggcggctgttcagatg
cgcctcctccatgaactggtgtacgcgtcccgtcgcatggggaaccccggcctctctgtg
cgccatctctccttcctgctgcagaccatgctggacttcctgtcagatcaagagaaaaaa
gaggtgacccagagtctggagaactacacctccaagtgtccgggagggatggaggtcatc
acgcttcctgacggcctgaagctcccccccgtgcccttcactaagctccccatcgtacga
tcagtgaagctgctcaatctgcccctcagcctgcgtcctcacaaagtgaaaggcctgctg
ggacagaacatgtccaccgccagccccttcatctactctcccatcatcattcacaacaga
ggagaggagcgcagtaagaagatcgagttccagtgggttcaaggagatgtttgtgaagtt
cagctcatggtctacaaccccatgccttacgaacttcgtgtggagaacatgggcttgctg
acatctggagtggagtttgagtcccttcctgctgcgctctcgctccctgcagagtctggc
ctctaccccgtcactttggtaggcgtcccgcgaacagctggcaacatcactgtcaacggt
taccacacgtcggtgttcggtgtgaccagtgactgcctgctggagggtctcaccagtgtg
aagaccagtggctgcttggtggaggtcatcccctccctcccccgtctgcagctcagcaca
tctctgccacggtcagctcacacgcctcagccgacgtctaaagaggaactgtcgagcacc
gtttccgtccagcttttcaatggagagatgcagccgctcaccatcaccttggagaacatc
ggatctgaggacatcgagactctggagctcacctctaagaccaccaccaccaaagagaaa
gtgttcggggagtttctgagctgggatctggacgaggcgttgtctcacctccctctgaag
tgcggccaggcgttaacgctgaccgtcagaatcaaagtgaaactggacttctccggccag
gagagccttctgcaggacctcaacgatgatgggatcagcctgacgggcctgccaatcaac
agtccgctgcgccatgtcctcaaaccccgctccgaaaacaagacggtcggcagcgagtct
ggcagggcggagtacagccacattaagagtttggacgccgtgctgaacttcaagtactcg
gggggagcgggcaacgtggagggctactacagggagctgtctttgggaatccatgttgac
gtggagccgtctgtgttcttcaccagggtcaacaccctgcctgcaaccagcacccgtcag
tgtcacctcctgctcgacatcttcaacccgacggagcacgagctcaccgtcagcgccaag
aacaaccaggacctggttctgcacgccagcgagtgccagaggatggccatccaggtggac
aagtttgactttgagactctgccgcagccggaccaggagacggctcgcttcacaaacccc
aaacagctggaggaggagcgccagcatgcccagggctgccagatcaacagcaatctgggc
atctgttggagcatcccgtccctgcggcgcagtggagaggccagtgtggagggagtcctc
aaccagctggtcctggagcacctgcagctggctcctctgcagtgggacgtgctggtgaac
gggaagccgtgcgactgtgatgtcgtcgctgactgtagatcaggcgacgctgtgtctctg
gaggtccagctgaccaacctgagtaagaactcagtgggtccgctggcgctgaccgtggtc
ccgtaccaggactaccagaacggggtccagaactacgagctggaggacgccgtgaccttc
atcggatccagcaccttctacatcgacacggtgaaacccaaagagagctccgtgtgtgtg
ggcgcgctgctcttcctctacaccggagatttctacctgaatataaagtttcagggcgac
agcgctggacgagatcttcctttagcttggttcactctgcccagcgtccacatccgagcc
ctggaacccccccagcaggccggggcctag
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