Pseudochaenichthys georgianus (South Georgia icefish): 117455087
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Entry
117455087 CDS
T09629
Symbol
efna1a
Name
(RefSeq) ephrin-A1a isoform X1
KO
K05462
ephrin-A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117455087 (efna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117455087 (efna1a)
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117455087 (efna1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117455087 (efna1a)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Growth factors (RTK binding)
117455087 (efna1a)
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117455087 (efna1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117455087 (efna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117455087
NCBI-ProteinID:
XP_033950339
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All DBs
Position
11:14569183..14582951
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AA seq
227 aa
AA seq
DB search
MDLVWIVGFVVSVCAWFASAERHSVYWNSTNPKFLKDDYTVEVKLNDYLDIVCPHYPAGE
VPLLDAERYVLYMVEREDFDICKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVAVDGSQEARVAKGGTGGAAVGAGGGVHNPT
NRLPAADDPVVVLPDVQKSARSNSAVTASSLSILSLLVPFSLLLLLH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtttggattgtgggcttcgttgtgagcgtctgcgcctggtttgcttcagcg
gagcgacacagcgtctactggaacagcaccaacccaaagtttctaaaggacgactacact
gttgaggtcaagctcaatgactacctggacatcgtctgcccccattacccagcgggtgag
gtgccattgctggatgctgagcgatacgtgctctacatggtggagcgtgaggacttcgac
atctgcaagcctcagtcatacgaccagatgcgttgggagtgcggccatccatttgctcct
cacgccgcggaaaagttctcggaaaagttccaacgttttactccctttactctgggaaag
gagttccgccaaggagaaagctactattatatctccaaacctctgcaccaccatggacag
gagtgcctcaggctcaaggtggacgtcgtagccgttgatggctctcaagaagccagagtg
gctaaaggaggcacaggtggggctgcagttggagccgggggcggggttcacaacccgacc
aacagactgcctgcagcagatgacccagtggtagtcctgccagacgtccagaagagtgca
cgttcaaactctgcagtgacggcttcctccctctcgatcctctcactgctagtcccattt
tcattactgcttttgttgcactga
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