Pseudochaenichthys georgianus (South Georgia icefish): 117455104
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Entry
117455104 CDS
T09629
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117455104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117455104
03037 Cilium and associated proteins [BR:
pgeo03037
]
117455104
Transporters [BR:
pgeo02000
]
Other transporters
Pores ion channels [TC:
1
]
117455104
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117455104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117455104
NCBI-ProteinID:
XP_033950403
LinkDB
All DBs
Position
1:complement(15721143..15732402)
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AA seq
745 aa
AA seq
DB search
MEVDSVFYTDRSGRVSSNPLLDQLPSYQSLLYRRKSSTAGTKRRSSSRGRIGSSGSGKWG
VGTISRREEKPKSQTEERPIRELPRTMAEKRRDNTQRLEEDRELSSLKQLEHSTRRHLRR
LRDDVHQWLGSLKLWRGDIHLIEGMFGTGILSYFSFLRFLVMLNLIIFVLMFSFVMLPII
IAPNVSNITYNLNLESECSVYPRSTRRGLVIFHEHITDLLSGGGFLEQTYLFYGYYRADK
IHFSNSTYNLPLAYLLVTIAYLFFSLIWIVKRSATGFKRNLVQDEDRFQSFCNKIFAGWD
FCITNENAVRLKRSSLLYELRTDLEEERIKQKIADRTRKERCRIYLIRLILNLFVIGVLM
GCFYSIYLATIFSQEVQMDTKKDNFIVDLIYEYLPSIVITLANFITPLLFSAIINYEDYS
PAFEIRFTLMRCVFMRLTSIGVLLFSLWSQITTCGKEPCLCGYNHVLYSCWETRIGQEMY
KLTIFDFIIIFAVTVFVEFPRKLIVQHCDCGLAKWFGQQEFAIPQNVLEIVYGQTICWIG
TFYSPMLPAICTMKYFFIFYIKKVSLMNNCRPATRPFRASSSNFFFLVVLLIGLALACLP
VSFSVAQINSSQACGPFVNYTTSWEVLPNTVSELPHGIKTLLFALSSEAFAVSFFVVTCL
IMFYVIALAGAHKRVINQLREQLVVEGRDKRFLIQKLCQAQRLSAIKSPGSKSQPRSPSY
HTSFSNNFNESVFLAHSPPDSSTHV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgactcagtgttctacactgatcgtagtggaagggtcagcagtaacccactg
ttggaccagctccccagctaccagtccctgctgtaccgcaggaagtcgtccacggctggc
accaagcgaaggagcagctccagagggcgcatcggctcctctggcagtgggaaatggggc
gtgggcaccatcagcaggcgtgaggagaaaccgaagagtcagacggaggagagacccatc
agggaactccccaggaccatggccgagaaacggagagacaacacacagcgcttggaggaa
gatcgagagctcagcagtttgaaacagttggagcacagcacccgccggcacctgaggagg
ctgagggacgatgttcaccagtggctgggctccctgaagctctggaggggcgacatccac
ctcatagaggggatgttcggcacagggatcctgtcgtacttctccttcctgcgcttcctg
gtcatgctcaacttgatcatctttgtgctcatgttcagcttcgtcatgttacccatcatc
atagctcctaacgtttcgaatatcacctacaacctgaatttagaaagtgagtgcagtgtg
tatcccagaagcactcggcgagggctggtcatctttcatgagcacattacagatctgctg
tctggaggaggctttctggaacagacttatcttttctacggctactacagagcggacaaa
atccacttttctaattccacttacaatttgccgctggcctacctgttggtcaccatagcc
tacctgttcttcagtctcatctggattgttaaaaggtctgccacaggatttaaacgtaac
ctggttcaggatgaggatcgtttccagagtttctgcaacaagattttcgccggctgggac
ttctgcatcaccaacgagaacgcagtgaggctcaagagaagcagtctgctctacgagctc
aggacagatttggaggaggagaggatcaaacagaaaatagcagatcgaacccgcaaagag
aggtgccggatttacctcatccgcctcatcctcaaccttttcgtcatcggtgtgctgatg
ggttgcttctacagcatttacctagccaccatcttctcccaggaagtccagatggatact
aaaaaggataatttcatcgtggatctcatctatgagtatctcccctcaattgtcatcacc
ttggctaacttcatcacccctctcctcttctcggctataataaattacgaggactactcg
cctgccttcgagatccgcttcactctcatgaggtgtgtcttcatgcggttgaccagcatc
ggggttctgctcttctctctctggtctcagatcactacatgtggaaaggagccctgcctg
tgtggctataaccacgtgctttactcttgttgggagacccgcattggacaggagatgtac
aaactcaccatctttgacttcatcatcatttttgcagtcaccgtctttgtggagtttccc
agaaaactgatagtgcagcactgtgactgcggcctggcgaagtggtttggccagcaggag
tttgccatccctcagaacgtgctggagatcgtctacggtcagaccatctgctggatcggc
acgttctacagcccgatgctgcctgccatctgcacgatgaaatacttctttatcttctat
attaaaaaggtgtctttgatgaacaactgccgtccagccacacgtccgttccgagcctcc
agctccaacttcttcttcctagtggtgctgctgataggcctggctctggcctgcctgcct
gtctctttcagtgttgcacaaataaactcttcccaggcctgtggaccattcgttaattac
accacctcctgggaggtgctgccaaatacagtatccgagctaccccatggaatcaaaacc
ctcctcttcgctctctcatcagaggccttcgctgtctccttctttgttgtcacatgtttg
atcatgttttatgtgattgcactagctggagctcacaagagagttattaaccaactgagg
gagcagctggtagtggagggccgtgacaaacgtttcctgatccaaaagctgtgccaggcc
cagaggctctcggctatcaaatccccggggtccaaatcccagccccgcagccccagctat
cacaccagcttctccaacaatttcaatgaaagtgtgttcctggcacactcacctcctgac
tcctccacacatgtgtga
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