Pseudochaenichthys georgianus (South Georgia icefish): 117455117
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Entry
117455117 CDS
T09629
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117455117 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117455117 (snx27a)
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Others
Others
117455117 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117455117 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
DarA_N
USP7_C2
DUF5783
Motif
Other DBs
NCBI-GeneID:
117455117
NCBI-ProteinID:
XP_033950380
LinkDB
All DBs
Position
11:14651267..14661676
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AA seq
565 aa
AA seq
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MADVGDDETQSVLPAASRNGPAVVSSAGTAGQSAATITVTSGPRTVRIVKSESGYGFNVR
GQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVSVEGATHKQVV
DLIRAGEKELVLAVLSVPAQEADGLEGGEEVQINYDYSDKQAVPISVPTYKHVEQHSERF
VVYNVYMSGRQLCSKRYREFAILHQNLKREFSNYNFPKIPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDNTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRT
CEGYNEVAFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCS
NNEYLPPLETQQKGWRHLGGEIATS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggagacgatgaaactcagtcggttctccctgcggcatcacgtaacggt
ccggccgtcgtttcgtctgcgggcaccgcgggccagagcgcagctaccatcacggtaacg
tccggtccgcggaccgtgaggatcgttaagtccgagtccggctacggcttcaacgtccgc
ggtcaagtcagcgaaggaggacagctccgtagcatcaacggggaactgtacgctcctctg
cagcatgtcagcgccgtcctgcccggaggtgcggcagaccgagccgggatagcgaagggt
gacaggatcctggaggttaatggggtgagcgtggaaggtgccacccataagcaggtggtg
gatctgatccgtgcgggggagaaggagctggtcctggccgttctgtctgtcccagctcag
gaggctgatggactggaaggaggagaggaggtccaaatcaactacgactacagtgacaag
caggcagtgcctatatctgttcccacatacaaacatgtagagcagcactcggagagattt
gtggtgtacaacgtgtacatgtcaggtagacagctgtgttcaaagcgctaccgggagttt
gccatcctgcatcagaacctaaagagggagttttccaactacaacttcccaaagattcct
ggtaaatggcccttctccctgtctgaacagcagctggatgcacgccgtagaggcctggag
gaatatctcgagcgagtttgctctgtgcgggtgatcggggagagtgacatcatgcaggag
tttctctctgaatcagatgagaactacaatggagtgacggatgtggagctgcggatagct
ctgccagacaacaccaccatctctgtcagagtccgcaagaacagcaccacagaccaggtg
taccaggcgttagtgatgaaggttggaatggacagcattatggcaagctactttgccctt
tttgaagtcatcaaccactcctttgtgcggaagctggcaccaaatgagtttccccacaag
ctttatgtgcagaattacacgtcggcagtgccggggacttgcctggcgctccgaaaatgg
ttgttcagcttccaggaggaggagttgctaagagacaacccgctggcactgcactactgc
tttcaccaggcattggaagatgtgaagaagggattcataaaaacagaggacaagtcctac
cagctgcagaaactggccgagcagcgcaagatggccacgtacctgagtctgttgcggacc
tgtgagggctataacgaggtggcgttccctcactgctcctgtgactccaggaggaaggga
catgtcatcacagccatcagcatccatcacttcaagctgcacgcctgcaccgaggacggc
acgctggagaaccaggtgatagcttttgaatgggccgagatgcagcgctgggatactgat
gaggaggggatggctttctgctttgaatacgccagaggagagaagaaacctcgctgggtc
aagatcttcactccatactttaactacatgcacgaatgctttgagcgagtcttttgtgag
ctgaagtggaggaaacaggttgaggaagaggcatccgacaaagacaacaaaaactgcagc
aacaatgagtatctgcctcctctggagacgcagcagaagggatggcgccacctaggggga
gagatcgcaacttcctaa
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