KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117455122
Entry
117455122         CDS       T09629                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117455122 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgeo03041]
    117455122 (sf3b4)
Spliceosome [BR:pgeo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117455122 (sf3b4)
 Complex B
    117455122 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    117455122 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 117455122
NCBI-ProteinID: XP_033950388
LinkDB
Position
11:complement(18169076..18176520)
AA seq 394 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPASAPTPVLTAMGSGMPMPGMPPP
GFPNVPPPGSMPPSIPHSMNMPPNAGGQQGGGLPPGPPPFPGGMHPGMPQMSMPPGPPGM
VPPPPAPPGSNQSRAPLPPGMPPPPMGMPPRTPYGHPMGHPVPPGMRGPPPMPPPGYGAG
LPPRPPFGFQRGPPMPPRPPGVPPRVPMRAPMPP
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcagaaagaaaccaagatgccactgtatatgtcggcggcttg
gatgagaaagtatcagagccgttactatgggagcttttcctgcaggccggccctgttgtc
aacacgcacatgccaaaagacagggtgaccggccaacatcaaggttatggctttgtggag
ttccttagtgaagaagatgctgactatgccatcaaaatcatgaatatgataaagctctat
ggcaaacccattagagtaaataaggcttctgcgcacaacaaaaacctggatgtgggtgcc
aacatcttcattggtaatctggaccctgagattgacgagaaactgctctacgacacattc
agtgccttcggcgtgatcctccaaacgccgaagatcatgcgagacccagacaccggcaac
tccaagggttatgctttcatcaattttgcgagcttcgacgcatcagatgccgccattgaa
gccatgaacggccagtacctctgtaacaggcccattactgtgtcctatgccttcaagaag
gactccaaaggagagcgacatggctctgccgcagagcgactcctggctgcacaaaaccct
ctctcccaggcagacaggcctcatcagctgtttgcagatgctccaccgccagcgagtgcc
ccaacgccggttctcactgctatggggagtgggatgccaatgccaggcatgccacctcct
ggtttccctaatgttcctcctcctggatcgatgcctccatcaatcccccattcaatgaac
atgcctccgaatgcaggtggccaacagggcggggggcttccacccggacccccacccttc
cctggcggcatgcatccaggtatgcctcagatgtccatgcctcctggtcctccaggcatg
gtgcctccccccccggcccccccaggatcaaaccagtcccgggccccgctaccacccggc
atgcctcctccgcccatgggcatgccacccagaacgccatatggacatcccatgggtcac
ccggtgcctccagggatgagaggccctcctcccatgcctccaccaggctacggcgctggc
cttcctcctcgtcctccttttggcttccagagaggacccccgatgcccccgaggcccccc
ggtgtcccgccccgcgttcctatgagagcaccaatgccaccataa

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