Pseudochaenichthys georgianus (South Georgia icefish): 117455125
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Entry
117455125 CDS
T09629
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117455125 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117455125 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117455125 (tra2a)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117455125 (tra2a)
Spliceosome [BR:
pgeo03041
]
Common components
Common spliceosomal components
SR proteins
117455125 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117455125
NCBI-ProteinID:
XP_071060979
LinkDB
All DBs
Position
11:23311228..23325805
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AA seq
340 aa
AA seq
DB search
MSDIEDGNYERRGSRSPSKSDRGSPARAKLGSRSRSHSPARAAKRSESRSRSRSKSRSRS
RRHSNRRSRSRSYSNRRKSRSRSYSQEYRRKKSPSASPNSSRRRPSGNKSHDFPKEAATQ
GADGDVRANPDPSKCLGVFGLSLYTTERDLREVFSRHGPLAGVNVVYDQRTGRSRGFAFV
YYERIDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGSGSSSGGG
GGGGGGGREGGSRDGGGSREGGSRDGGGGRDGGRDGGGRDGGGGGGGGSRRGRDSHYDRG
YERGYDRYEEYDYSRRRSPSPYYQRYRSRSRSRSYSPRRY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgaggatggaaactacgagcgacgggggtcacgctccccgtctaaatcg
gatcgtgggagtccggctagggccaagttgggcagcaggtcacgctcccacagccccgcc
cgggccgccaagcgctccgagtccagatcccgctctcggtcaaaatctaggtctcgttcg
aggcggcactcaaaccgccgctcacgctctcggtcctattccaaccggaggaagtcccgc
tctcgctcctacagccaagagtaccgccgcaagaagagccccagcgcttcccccaattct
agcaggcgccggccatctggcaacaagagccatgacttcccaaaagaagcagccactcaa
ggcgcagatggagatgttagggcgaaccctgaccccagcaaatgtttgggggtgtttggc
ctgagcctctacaccacagagcgggacctgcgggaggtgttttcacgccacggccctctg
gcaggggtcaacgtggtgtacgaccagcgcacaggacgctcccgaggcttcgccttcgta
tactacgagcgaatcgatgattccaaagaggcgatggagcgagccaatggcatggagctg
gacgggaggcgcatcagagtggacttttccattactaaacgtgctcacacccccacacca
ggcatctacatgggccggccaactcacaacggtggcagcggcagcagcagtggtggaggt
ggaggtggaggaggaggagggagggaaggtggtagtagggatggaggaggtagtagggaa
ggtggtagtagggatggaggaggtggtagggatgggggtagagatggaggtggtagggat
ggtggtggtggtggcggcggcggcagcaggagggggagagactcgcattatgaccgtggc
tacgaacgtggctacgacagatatgaagagtacgattatagtcgcagacgctctccatca
ccgtactaccaacgatacaggtcccgctcacggtcccgctcctacagcccacggcgatac
taa
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