Pseudochaenichthys georgianus (South Georgia icefish): 117455261
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Entry
117455261 CDS
T09629
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117455261
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117455261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117455261
Spliceosome [BR:
pgeo03041
]
Common components
Common spliceosomal components
SR proteins
117455261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117455261
NCBI-ProteinID:
XP_071060886
LinkDB
All DBs
Position
11:5981065..5989142
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AA seq
426 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGGGGGGGGGGSSGGGGGRGGGGGGGGGGDRGGGGDRGGGG
DRGGGGGEGGRSSSSSGYGRFGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDYMRQAGEV
TYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRKRSYSRSRS
HSRSRSRSRRSRKSHSRSESSSRSRSHSRAASRSRSRSRSKKDKLKVKKEEEERSNGAPK
NKDRSRSRSLKSKKSKKDVKKKKDDSRSRSRSRSRSRSRSGIKDRSRKSGSKGREPVKSE
DEGAEPERASRSHSRSPAESKSRARSKSKSKSKSRTPTPAKARSHSRSRSESRSKSHSAS
RSRSRS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtgtacattggaagactgagctacagggcccgagaaaaggacgtggagagg
tttttcaaaggctacgggaagatactcgaggtcgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgtgatgcagatgatgctgtttatgacttaaacggcaaggagttg
tgtggtgaaagagtcattgtggagcacaccaagggaccccgtcgggatggaggttatggt
ggtggtggaggtggtggtggtggcggaggtagtagtggtggaggcggcggcagaggagga
ggaggaggaggaggcggcggcggtgatagaggaggcggcggtgatagaggaggcggcggt
gatagaggaggaggaggtggtgaaggaggaagaagcagcagcagcagtggatatggtcgc
tttggaagagacagatatggtccacccataaggacagattatcggctcattgttgagaat
ctttccagtcgctgcagctggcaggatttgaaggactacatgagacaggcaggggaggtg
acttatgccgacacccacaagggccgcaggaacgagggggtgatagagttcaggctctac
tccgacatgaagagggctctggagaagctcgacggcaccgaagtgaatggaaggaagatc
cgtctgatcgaggaccgccctggagccagacgcaagcgctcttattctcgcagtcgcagc
cactccaggtcccgctccaggagccgcaggtctcgtaagagccacagccgcagcgagagc
agcagccgcagccgttcccactccagagcggcgtcccgctcccgcagccgatctcgtagc
aagaaggataagctgaaggtcaagaaggaagaagaggagcgcagcaatggcgcgcccaag
aacaaggaccgcagcaggagccgcagcctcaagagcaaaaagagcaagaaagacgtcaag
aagaagaaggatgactccaggtctcgctctaggtctcgctccaggtctcgctctagatca
ggaattaaagatcgctccaggaaatcaggctccaagggccgtgagccagttaagagcgag
gacgagggggctgagcccgagagggcctcccgctctcattcccgctcccccgctgaatca
aaatccagagccaggtctaaatcaaagtccaaatccaaatcacgtacccccacacctgcc
aaagcccgctcccactcccgctcccgctcggagtcccgctccaaatcccactctgcctct
cgctcccgttcccgctcttag
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