Pseudochaenichthys georgianus (South Georgia icefish): 117455397
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Entry
117455397 CDS
T09629
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117455397 (matn1)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
117455397 (matn1)
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GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
LpxI_N
Motif
Other DBs
NCBI-GeneID:
117455397
NCBI-ProteinID:
XP_033950801
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Position
11:21108164..21112714
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AA seq
439 aa
AA seq
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MTPTPLFFLLLLGLMGARATVDLRMAAAMAAGLCKTRPTDIVFIVDSSRSVRPSEFEQVK
VFLAKVIEGLDVGPNATRVGVVNYASRVKSEVSLKTHRTKAGLIKAVTKIEPLSTGTMTG
LAIQFALNVAFSESEGARVKSPDISKVAIIVTDGRPQDNVKEVALRARDAGIEIFAIGVG
RVDMNTLKQMASDPLDDHVDYVESYSVIEKLTKKFQEAFCACSNAATDVVFLIDGSKSVR
PENFELVKKWINQIVDKLDVSEAKAHVGLVQYSSSVRQEFPLGRFNNKKDLKDAVKKMAY
MERGTMTGQALRYLTDNSFSAGGGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEQGYKMY
AVGVGNAVEDELKEIASEPTGEHYFYTADFKAMTQIAKKLQINICQEEDPCECDSLVKFQ
KKVEDALQALTKKYILYNG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctaccccactgtttttcctgctgctgctcggcctcatgggggctcgggccacc
gtagacctccgcatggccgccgcaatggcggcaggtttgtgcaaaactcggcccacagac
attgtgttcatcgtcgacagcagtcggagcgttcgcccttcagagtttgagcaggtcaag
gtcttcctggctaaggtcatcgagggtcttgatgttggacccaacgccacccgtgtggga
gttgtcaactacgccagccgcgtcaagagcgaggtgtctctgaagacgcatcgcaccaaa
gccggtctgattaaagctgtgacgaagatcgagcccctttccaccggaacaatgaccggt
ctggccatccagtttgccctgaacgtggccttcagcgagagcgagggcgctcgcgtcaaa
tctcccgatatcagcaaggtggccattattgtgacagacgggcgcccccaggacaacgtg
aaggaagtggctctgcgtgcacgggatgccggtattgagatcttcgccattggtgtggga
cgtgtggacatgaacaccctgaagcagatggccagtgaccctctggacgaccacgtggac
tacgttgagagctacagcgtcatcgagaagctcaccaagaagttccaggaagccttctgt
gcttgcagcaatgcagcgacagacgtagtgttcctgatcgacggctctaagagcgtgcgt
cctgagaacttcgaactggtcaagaagtggatcaaccagatcgtcgacaaactggatgtt
tctgaggccaaggctcacgttggactggttcagtactccagctccgtcagacaggagttc
cctctgggtcgcttcaacaacaagaaagacctgaaggacgctgtgaagaagatggcctac
atggagaggggaaccatgacaggccaggccctccgttatctgacagacaacagcttcagc
gccggagggggcgcccggcccggagtcgccaaggtgggcatcgtcttcactgacggacgc
agccaggactacattggagatgccgccaagaaggccaaggagcagggttacaagatgtac
gctgttggagtgggcaacgcagtggaggatgagctgaaagagattgcctctgagccgact
ggagagcactacttctacactgccgacttcaaggccatgacccagatcgccaagaagctg
cagattaacatctgtcaagaggaggacccttgtgaatgcgactcccttgtaaagttccag
aagaaagtagaagacgccctgcaggcactaacaaaaaaatatatcctttacaacggctga
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