Pseudochaenichthys georgianus (South Georgia icefish): 117455533
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Entry
117455533 CDS
T09629
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117455533 (trim71)
04121 Ubiquitin system [BR:
pgeo04121
]
117455533 (trim71)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117455533 (trim71)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117455533 (trim71)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117455533 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
117455533
NCBI-ProteinID:
XP_033950957
LinkDB
All DBs
Position
11:24799354..24844267
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AA seq
831 aa
AA seq
DB search
MLQMASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSCQTTRRLHVLPCLHA
FCRQCLEGQRSPGEPLKLRCPTCDQKVCISEAGVDSLPSSNFLFSNLLDVVVSSEEQIQN
KNGHHNHLRGGLGGGSSGFHHPHGGLLHPNHLGEPGCSSCDEENPATSHCLDCQEYLCDN
CVRAHQRVRLTKDHFIERLGENLHLSCLNVNSNSGQQSLAQSLQNNFALLSLFQDHMSFC
QHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRSITIQLLSDAQQGRQA
VQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALRGLLQAQEDDR
FMFTPPDQALYIAVQSMGLISSGAFAPVTKAHGEGLKTALRGKPSSFTVIGYDHDGEPRL
SGGDTVSAIIMSVPDGHLTAVELTDHQNGSYTVGYLPKSEGEHLLSVLVCNQHIQGSPFK
VLVKSGRSYGALGSQVAAFGNEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSLRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGSFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDHENRIIVADSRNHR
VQVFEPNGNFLCKFGTQGNGFGQMDRPSGVAVTPEGVIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatggcttcgtttccagactcggacctgcagacctgcccgctctgcaaggag
ctgtgcgggtcctctgctcccatttcctccagctcttctacctcttcatcttcctcccat
acctcctcatcttcctgccagaccaccaggaggctccacgtcctgccctgcctccatgcc
ttctgcaggcagtgtctagagggccagcggagtcccggggagcctctgaagctgcggtgc
cccacctgcgaccagaaggtgtgcatctcagaggctggggtggactccctgccttcctca
aacttcctgttcagcaacctgctggacgtggtggtgagctccgaggagcagatccagaac
aagaacggccaccacaaccacctcagaggaggcttgggtggaggctcctcgggtttccat
cacccccatggaggcctgctgcaccccaaccacctgggagagcctgggtgcagctcctgt
gacgaggagaacccggccacctcccactgcctggactgccaggagtacctgtgtgacaac
tgtgtgcgggcgcaccagagggtgaggctgaccaaggaccacttcatcgagcgcctgggg
gagaacctccacctgagctgcctcaacgtcaacagcaactcggggcagcagtccctcgcc
cagtccctgcagaacaactttgccctgctgtccctcttccaggaccacatgagcttctgc
cagcaccacgacaatgaggtgtttctgttcttctgtgaaacctgctcggtgcctatctgt
cgggagtgcagtgtgggccgtcacatgggccataccttcgtttatctacaggacgccgta
caggactgcaggtccatcaccatccagctgctgtcagacgcccagcagggacgccaggct
gtgcagctaagcatggagaaggtccaggccatggcggagcaggtggagatcaaagccaag
gtggtgcagaccgaagtgaaggccctcgtgctccgacacaagaaagctttagaggagagg
gagtgtgaactactgtggaaggtggagaagatccgtcaggtgaaggccaagtctctgtac
ctgcaggtggagaaactgcaccagagtctgaccaagttggacagcaccatcgccgccgtc
agccaggtgttggacgagggccgccacctggacgtcctgctggcccgagagcgaatgctc
actcagatccacgagctgaaagctctgcggggtctgctgcaggcgcaggaggacgatcgc
ttcatgttcactcctccagaccaggctctgtacatagccgtccagtcgatgggtctgatc
agcagcggagccttcgcccccgtcaccaaagcccacggcgagggtctaaaaactgccctt
cgtggcaaaccctcctccttcactgtgattggatacgaccatgacggcgagcctcgcctc
tccggcggcgacacggtgtcagcgatcatcatgtcggtcccggacggtcacctgacggcc
gtggagctcacggatcaccagaacggctcgtacaccgtgggctacttgcccaagagtgag
ggggagcacctgctgtcggtgctggtgtgtaaccagcacatccagggcagccccttcaag
gtgctggtgaagtcggggcgcagctacggagccctggggtcacaggtggcagcctttggg
aacgagggggagggggacggccagctgtgtcgcccctggggcatcagcgtggacaaggag
ggatacgtggtggtggccgaccggagcaacaaccgcgtacagatattcaagccctgcggt
gccttccaccataagtttggctctctgggttcccgtccgggacagtttgaccgtccggcc
ggggttgcatgtgacagtctgagacgaatcattgtggctgataaggacaatcaccgagtg
caggtgtttacttttgagggccagttcctgctgaagtttggggaaaagggtaccaagaac
gggcagttcaactatccctgggatgtggctgtcaactctgagggtaagatcctggtctcg
gacaccaggaaccaccgcgtgcagctcttcggccccgacggctccttcctcaacaagtac
ggcttcgagggggccctgtggaaacactttgactctcccaggggcgtagcctttaaccac
gaagaccacctggtggtgaccgacttcaacaaccacaggctgctggtcatccggccggac
tgccagtcggctcgcttcctgggctccgagggcaccgggaacgggcagtttctgcggccc
cagggcgtcgccgtggaccacgagaaccgcatcatcgtggccgactcccgcaaccaccgg
gtccaagtgttcgagcccaacgggaacttcttatgcaaatttggcacacaggggaatggc
ttcggacagatggaccgcccctccggtgtggctgtgacgcccgaaggagtcatcgtggtc
gttgactttggaaataatcgcatcctcaagttttaa
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