Pseudochaenichthys georgianus (South Georgia icefish): 117455547
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Entry
117455547 CDS
T09629
Symbol
tdp2b
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117455547 (tdp2b)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117455547 (tdp2b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
117455547
NCBI-ProteinID:
XP_033950983
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All DBs
Position
11:19458164..19464244
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AA seq
360 aa
AA seq
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MASTSASEKPSVSNVEENRSRLCSEFAGITGADSAVAQCYLVENQWEMQKAMNSFFEADL
EKVFEEDMSDSESSSKRKRQKIEXKPPAESIDLTGESPVSTRKPSEEDDHKLSLISWNVD
GLDTDNIGERARGLCSYLVLYTPDVVFLQELIPSYILYLKKRAVSYLLIEGGEEGYFTGI
MLKKSRVKFVESEIVTFPTTQMMRNLLVAQVTFKGQKLCLMTSHLESCKAQAGERVKQLR
VAMQRMREAPDDVTVLFGGDTNLRDTEVAKVGLPPQVSDVWERLGKQEHCRYTWDTKANN
NKALPYVSRCRFDRVYIRPATKEGVPRLAPDHMALLGLEKLDCGRFTSDHWGIYCSFIAA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacatctgcctcggaaaaaccctcagtttctaatgtggaagaaaacagaagt
cgcctgtgcagtgagtttgcgggcataacaggagctgatagcgccgtggctcagtgctac
ctagtggaaaatcagtgggagatgcagaaagctatgaactcattctttgaggctgatttg
gagaaagtatttgaagaagatatgtcagacagtgagagcagctccaaaagaaagagacag
aaaattgagngaaaacctccagcagaaagtatagatttgactggagagagccctgtctcc
acacgcaaaccatcagaagaagacgaccacaaactgtctctgatctcctggaacgtggat
ggactggatacggacaacattggagagagggccagaggcctgtgctcctacttagtctta
tacactccggacgtggtgttccttcaagagctcattccatcttacatcctgtatttgaag
aaacgggctgtcagttacctactcattgaaggtggtgaggagggttacttcactgggatc
atgctgaagaagtcaagagtcaaatttgtggagagtgagatagtaactttccccactact
caaatgatgaggaatctgctcgtagctcaggtgactttcaaaggacagaagctgtgcctg
atgacttcccacctggagagttgtaaagcgcaagcaggggagcgggtgaaacagctgcgg
gttgctatgcagaggatgagggaggcccctgacgacgtcaccgtcctgtttggaggggac
acaaacctgagggacactgaggttgccaaggtgggtctccccccacaggtcagcgatgtg
tgggagcgactgggaaagcaggagcactgccgttacacatgggacaccaaagccaataac
aacaaggcgcttccttacgtcagtcgctgccgcttcgaccgtgtctacatccgcccagca
accaaggagggcgtcccccgcctggcccccgaccacatggccctgttgggtctggagaag
ctggactgtggacgcttcactagtgatcactggggaatctactgtagcttcatcgctgcg
tag
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