Pseudochaenichthys georgianus (South Georgia icefish): 117455556
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Entry
117455556 CDS
T09629
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117455556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117455556
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117455556
03012 Translation factors [BR:
pgeo03012
]
117455556
04131 Membrane trafficking [BR:
pgeo04131
]
117455556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117455556
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117455556
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117455556
Translation factors [BR:
pgeo03012
]
Eukaryotic type
Elongation factors
117455556
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117455556
Exosome [BR:
pgeo04147
]
Exosomal proteins
Proteins found in most exosomes
117455556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Semialdhyde_dhC
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
117455556
NCBI-ProteinID:
XP_033950994
LinkDB
All DBs
Position
11:7555337..7561826
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQARYEEIAKEVSTYIKK
IGFNPATVAFVPISGWHGDNMLEASENMTWFKGWKVERKEGNASGVTLLESVDVILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPVMITTEVKSVEMHHESLT
EATPGDNVGFNVKNVSIKEIRRGFVAGDSKNNPPKGADNFTAQVIILNHPGQINAGYAPV
LDCHTAHIACKFSELTEKVDRRSGKKIEDNPKFVKSGDAAIVKMIPQKPMVVEAFTDYAP
LGRFAVRDMRQTVAVGVIKKVEKKDASGKVTKAAKVAERNR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagttccacatcaacatcgtggtcattggccacgtcgactccggcaag
tccaccaccaccggtcatctgatctacaaatgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggcaagggctccttcaagtatgcctgggtgttg
gacaaactgaaggcagagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagactgccaagtactacgtgaccatcattgatgcccctggacacagggatttcatcaag
aacatgatcactggtacctctcaggctgactgcgctgtgctgatcgttgctgccggtgtt
ggtgagtttgaggccggtatctccaagaatggccagacccgtgagcacgccctgctggcc
tacaccctcggtgtgaagcagctcatcgttggagtcaacaagatggactccaccgagccc
ccttacagccaggcccgttatgaagaaatcgccaaggaagtgagcacttacatcaagaag
atcggcttcaaccccgccaccgtggcctttgtccccatctctggatggcacggagacaac
atgctggaagccagtgaaaatatgacatggttcaagggatggaaggttgagcgtaaggag
ggtaatgccagtggagtcactctgctggagtctgtcgatgtcatcctgcccccgtcccgc
cccaccgacaagcccctccgtctgcccctgcaggacgtctacaaaattggtggtattgga
actgtgcccgtgggccgggttgagaccggtatcctgaagcctggtatgatcgtcaccttt
gctcctgttatgatcaccactgaggtgaagtctgttgagatgcaccacgagtctctgact
gaggctacgcccggtgacaacgtcgggtttaacgtcaagaacgtgtccattaaagagatc
cgccgtggattcgtggctggcgacagcaagaacaatccacccaagggagctgacaacttc
actgcccaggtcatcatcctgaaccatcccggacagatcaacgcaggttacgcccccgtg
ctggattgccacacagctcacattgcctgcaagttcagcgagctcaccgagaaggtcgac
cgtcgttctggcaagaagattgaggacaaccccaagtttgtcaagtcaggagacgctgcc
attgtcaaaatgatacctcagaagcccatggtggtagaggccttcaccgactatgctcca
ctgggtcgctttgctgtgcgtgacatgaggcagacagtggctgtcggtgtcattaaaaag
gttgagaaaaaagatgctagtggaaaagtcaccaaggctgctaaagttgctgaaaggaat
agatga
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