Pseudochaenichthys georgianus (South Georgia icefish): 117455741
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Entry
117455741 CDS
T09629
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117455741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117455741
Transporters [BR:
pgeo02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117455741
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
117455741
NCBI-ProteinID:
XP_033951170
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All DBs
Position
12:21526088..21571898
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AA seq
728 aa
AA seq
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MDETHNNKLSLAKGAKDIAKEAKRQAAKNVGKAVDRASDEYSTHRSYNRFQDEEEDENNY
NANDQHANDEEGASSDDTEGHDDEDEIYEGEYQGVPAHNEGKLRDGQVALGQPVSDSLKS
HKELESERQTDEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVLPSA
ETDMCVKNSGAGWLGSVVYLGMMFGAFFWGGLSDKLGRKQCLLISMSVNGFFAFLSSFVQ
GYSMFLVCRMVSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWA
IIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFLLENGKHDEAWMV
LKHIHDTNMRARGEPERVFTVNRIKVPKQLDELVEMQNESANPVLKVLYKIKAELRGIWL
TFMKCFDYPVKDNTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASRVKIHNNERIE
DFTFNFTLENQIHRNGMFLNDRFISMKIRSVTFIDSSFLNCYFEDVSSVGSFFQNCTFVD
SFFYNTDVDDAKLTNSRVINSSFHHNKTGCQMTFDADYSAYWVYFVNFLGTLAVLPGNIV
SALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNSLDVVTA
ELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILLASSVLVAGGLVGLRLP
DTRANVLM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacgcacaacaacaagctttccttggcgaaaggtgccaaggacatcgctaag
gaagcaaagaggcaagctgccaaaaatgtaggcaaagcagttgatcgagcctcagatgaa
tactcgactcatcgcagctacaaccgtttccaggacgaggaagaagacgagaacaactac
aatgctaacgatcagcacgccaacgatgaggaaggggcctccagtgatgacacagagggc
cacgacgatgaggatgagatctacgagggggagtaccaaggcgtcccggcccacaatgag
gggaagctgcgggacggtcaggtggctctgggtcagccggtctctgacagcctgaagagt
cacaaggagctggagagcgagaggcagacggacgaggaggagctggcccagcagtacgag
ctcatcatgcaggagtgtggccacgggaggttccagtggcagctgttcttcgtcctcggg
ctggcgctcatgtctgatggcgtggaggtgttcgtggttggcttcgtcctccccagtgct
gagacagacatgtgtgtcaaaaactctggtgctggatggctgggcagcgttgtgtatctg
gggatgatgtttggagctttcttttggggcggcctgtcagacaagctgggccgtaaacag
tgcctgctgatctccatgtccgtcaacggcttcttcgccttcctctcctcttttgtccaa
ggatacagcatgttcctcgtctgccgcatggtgtctggcttcgggattggtggagcggtg
cccattgtgttctcctactttgcggaggtgttggctcgggagaagagaggagagcatctg
agctggctgtgcatgttctggatgatcggaggaatctacgcctcagccatggcctgggcc
atcatcccacactatggctggagtttcagcatgggttcagcctatcagttccacagctgg
agagtgtttgtggtggtgtgtgcgctgccgtgtgtctctgcagtggtcgctctcactttt
atgcctgaaagcccccgcttcttactggagaatgggaaacatgacgaggcctggatggtg
ctcaaacacatccacgacaccaacatgcgcgcccgtggagagcctgagagagtgttcact
gtcaacaggataaaagtccccaagcagctggacgagctggtggagatgcagaatgagtcg
gccaaccccgtcctcaaagtcctctacaagatcaaggctgagctcagaggaatctggttg
actttcatgaaatgcttcgactacccagtgaaagacaacactataaagctggctatagtc
tggtttactctatcatttgggtactacgggctctccgtctggttcccggacgtcatcaag
cacctccaagccgacgactacgcctccagagtgaagatccacaacaacgagcgcatcgaa
gacttcaccttcaacttcaccctggagaaccagatccacaggaacggcatgtttctgaac
gacaggttcatcagtatgaagatcaggtcagtcacattcatcgactcgtccttcctcaac
tgctactttgaagacgtctcctccgtagggtccttcttccaaaactgcacctttgtcgac
tccttcttttacaacacagatgttgacgatgccaaactgacaaattcaagagtgatcaac
agctccttccaccacaacaagacgggctgtcagatgacgtttgacgccgactatagcgcc
tactgggtatactttgtcaacttcctgggaacgctggctgtgctgcccggcaacatcgtc
tctgccctgctcatggacaaaataggacgtctcagcatgttaggaggctccatggtgctc
tcaggcatcagctgcttcttcctgtggtttggcaccagcgagtccatgatgatcttcatg
ctgtgtctctacaatggcctcagtatctccgcctggaactcgctggatgtcgtcaccgct
gagctgtacccgacagacaggaggggcacaggcttcggcttctgcaatgccatgtgtaag
ctggcggcggtgctgggcaacctgatctttggctctctggttggcatcaccaaggcgatc
cccatcctgctggcctcgtctgtgctggttgccggcgggttggtggggctccgactgcca
gacacacgggccaatgtcctcatgtaa
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