Pseudochaenichthys georgianus (South Georgia icefish): 117455761
Help
Entry
117455761 CDS
T09629
Symbol
sec16a
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117455761 (sec16a)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117455761 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
117455761
NCBI-ProteinID:
XP_033951207
LinkDB
All DBs
Position
12:28185296..28211505
Genome browser
AA seq
2342 aa
AA seq
DB search
MQPPPWSGPPGASGGPPPPSGPNMFRRTRPLKHSAAAAAAHAPMAPTTQPMTNPFAFVRA
PPPMAAGGLPTVPNSNPPPMQAPPNSMYSQASSGLPPQRQTPEGGSATPPGPLPSSLPGV
TLFNPHSAAAPRVYSAPGPAGYASSHNEQGYFNSTDQTPSVALEPPHAAAAPAQSQAPFN
QEYQGRPPSQPVPFQPVPPTSSYSQWSPDHGSRPPSVQNYFQPTSDPPPQPFNLPPQTQM
YPSLSPPPHHNAPAPPTQPAHPQSQAQFPPQNPVNAPSSQWPDPNAPQQQNSHFQTQSYF
SQSSAPQDSWFNMPPQDSGYHQMGTGLAHPQPRPESHASQHASNTGAGSAPVPYSQESGS
LSMFFKDSDVENEETLAGDRNKAVNGIPGSLQHRSHPSQSDAPLQDHSHLPYMNEGCHPP
QPSTQEPPDPQNDHMENLECVPNQEVLPSEMHGSPPVAPAAAQGVDQYETGPNLETPGSI
PRPIRSASVSSNYSTMSHGSGSGTRRHPGVVGTFIQQESPRLTEDANLPAATVGYFEQID
TSPAGAMGVPPSPQEQMWAPTPSPPKPTGIFQASANSSFEPVRSHGVGVRPAEVDRANVV
AEGRAKAPPGNLEQPPDNMENIYGQGHPLPAGPGGGVPHLPHPVLLPHSRPSSRAFGASR
PCESPATTLWAPHDPASLGANILLAPAAPTVLAPLREPSVDVIQPPEDSPLDLQPPQRTQ
AQQHSENLENPPQVSEAEPADLHGNLGYASLLVADSIQQPVLIAPPVSNYSVIPPSTAAQ
APSLKETTPPVRPLPQGQGASTSQPPPVTSDQNQLFPSGPLSFNPSASNRGPLNLTRDYA
DSAVSDLTQSQPARPPLSRGQSFVGEGLSALQVNPHASLAAAPVSNHNQPSNYELLDFSM
HQSQAHIPASPHESPQSSNGFYLQVTKDAQQGGRAMGNVPVQTPASSSSTPQVPPAPPQA
AATIQPPPAEAPQTSQAAPPGPRYAAPVPVSAAPPSRDQYPPPALAAGDAYPPGPRGPAP
PGAPQPAPGEPPRPPSSAGSQQGYGPPPPPGPGQMYGGYYGNYGEYPDGRAAYPPGQYPP
QPPGQYPPQPPGQYPPQPPGQYPPPPPPGDPRAQQYYPDGSYRGRADPWYGRYEGQAAAY
RDPNLQYREPQPERPSSRASQYSDRSSSRQGYPEDPNRANQSAYNEYYADYAKHYDYGAY
NYGAYDPRYRAYYDQAWANYDESCRGRENYYNQQQQAYPARKEGFEDQWRYYPGYDASFD
DDYRRRGEAFGDDFDRRSVHSEQSAHSVHSAHSNTSRRSSFSSRSQPSQVYRSQPDLVSA
VYDTTSSTLAVDYSYAQYQNHADATQNYSQYLYPSEYNADSTWTAPEQPPPRPATPEKFS
MPHRCARFGPGGHLVQVLPNLPSAGQPALVDIHNLETMLQDTPEQAELRAFPGPLVKEET
HKVDVIKFSQNKALECARDNNLLDRDSARLLWDFIMLLCRQNGTVVGTDIADLLLKEHRS
VWLPGKSPNEANLIDFNNEPLARAEEELGAGPLSLLSDTFMIVPENLGKETERFRELLLF
GRKKDALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMP
ASATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTISTMGDTLASKGLIDAAHFCYLMAQ
VGLGVYTKKSTKMVLIGSNHSMPFFQCASNEAIQRTEAYEYAQSLGSQPCLQPNFQVFKL
IYACRLAEAGLSAQAFHYCEVISRTVLMQPSFYSPVFISQIIQMSEKLRFFDPQLKEKPE
QELFVEPGWLSHLRQLDGQIRTGVITYSLDRAPSSQYDCSSPSSDLDQLSPSEPYNMPVE
MDGPDNQLMSSLLPGPPQQGVQLMPPAPTSILQDGMAPPQHFQPNDVPQFYPVPPSGPPG
QMPVSPSYPPQGPVFAPPPFQPQPEQIEMFPGAHQQPPPPQMGQMSPHAPHPPIQMNPPP
LQMPQHMPPSPMHMPPAEPMIHSPPEMHQMPSFTPQRDFYDQMATMGPGRRSRTVSQSSM
HMPSGRRSRTTSESSTHSGARERSNSVVKQASPPPPSIPEQPRREEAKRAKKNSPKKGGG
GGGVGGLLSWIIRKGKNEAHLPDDNDKSIVWDEQKQRWVDMNEPEQESKPPPPPPLXIPK
MAQMAGPTAPPSGGPPVNMFSRRAGTKSRYVDVLNPSRAATAGGFAPAPADFFAPLAPMS
MPANLFVPSSAPTDQQPLEGSEGGHQEQNSPNTHAAPQMFNPTLLPPAPEGHPVPDGSQS
GELSRSSSMSSLSRESPPAPAPPPAGGVTFYNPAQFAQASAPSGGGHRPGRLGGQRQYPP
SK
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctccttggagtggacctccaggagcctctggcggccctcctcctccttct
gggcccaatatgttccgcaggaccaggcctctcaagcactcggcagcagcagcagcagct
catgccccaatggcacccactactcaacccatgacaaacccttttgcttttgttagagct
cctccccctatggctgctggtggtctcccaacagttcccaacagcaaccctccaccaatg
caagcccctccaaactccatgtactcgcaagccagctcagggcttcctcctcaacggcag
actccggagggtgggtcagccacgccccctggtcccttaccgtcctctctaccaggggtg
actctgttcaaccctcacagtgcagcggccccccgtgtttactcggcacccggcccggca
ggatatgcatcctcacacaacgaacagggctattttaattctacggatcagacaccatct
gtggccctggagcccccacatgcagctgcagccccagcacagagtcaggcaccttttaac
caggagtatcaagggcggcccccttctcagcccgttccattccagccggtgcctcccacc
tcctcgtattcccagtggtcccctgatcacggtagtcgccctccgtcagtgcagaactat
ttccagcctactagcgacccaccgccacagccttttaatttacctccgcagacccagatg
tacccctccctgagcccaccacctcatcacaacgcccccgcccctccaacacaacctgcg
catccccagtctcaagctcagtttcctccccagaaccccgtaaacgcccccagctctcaa
tggcccgacccgaatgcaccgcagcagcagaactctcacttccaaactcagagctacttc
agtcagagctccgccccccaggactcgtggttcaacatgcctccgcaagactcaggctac
caccaaatggggaccggcctggcccaccctcagccccggcccgagtctcatgcatcccaa
catgcgtccaacactggggctggttctgctccagtcccatactcgcaggagtctggttcc
ctctcaatgttcttcaaagacagcgatgtggaaaatgaagaaacactggctggagataga
aataaagctgtgaacggtattcctggatccctgcagcatcgcagccaccccagccaatca
gatgctcctctgcaggatcactcacacctaccatacatgaatgaaggctgccacccacca
cagcccagcacccaggagccccctgatccgcagaacgaccacatggagaatttggagtgt
gtcccgaaccaggaagtattacccagtgaaatgcatggcagcccgcctgttgctcctgct
gcagcccagggagtagaccagtatgaaactgggccaaacctggagactccaggttcgatt
ccacgtccaattagatctgccagtgtgtcctccaactacagcactatgagccatggcagt
ggaagcggcacccggcggcacccgggagtcgtgggaacctttattcagcaggagagtcca
cgtctcactgaggatgctaacctgcctgctgccactgtgggctactttgagcagattgat
acttccccagctggagctatgggtgtacctccgagcccccaggagcagatgtgggccccc
acacccagcccgcccaaaccaaccggcatcttccaggccagcgctaacagctcctttgaa
cctgtgcgctctcatggagtaggggtgcgccctgctgaagttgacagggctaacgtggta
gcggaaggccgtgcaaaagctccgcctggaaacctggagcagccgccagataatatggaa
aatatttatggccaaggacatcctttgcctgctgggcctggaggtggtgttcctcacctg
cctcacccagtgctccttcctcactctcgaccttcatcccgggcttttggcgccagtcgg
ccctgtgagagcccggccaccactctgtgggccccgcatgatcctgctagcttgggcgct
aacatcctcctagcccccgctgccccgacagttctcgcccctttacgagagcccagtgtg
gacgtgatccaacctccagaggacagccctctggacctgcagcccccacagagaacccaa
gcacagcagcactcggagaaccttgagaaccccccacaggtgagtgaggcggagccggct
gacctccacggcaacctggggtatgcttctctccttgttgccgactcgatccagcagccg
gttttgattgccccgcctgtgtccaattacagcgtgattccccccagtactgctgctcaa
gcaccaagccttaaggagaccaccccccctgtgaggccactcccacagggacagggtgcc
agtacctcccaaccacctcctgtaacctctgatcagaatcaattgttcccgtctggacct
ttaagcttcaatccttcagcttctaatcgcggcccgctcaatctgacccgagactatgca
gactcggcggtgtcagacctgactcagtctcagcctgcccgccctcctctctcaaggggc
caatcatttgttggagagggcctttctgcgctccaagttaatccacacgcttctctcgca
gccgctcccgtctctaatcataatcagccttcaaattacgaactgcttgatttctctatg
caccaatcacaagctcacatcccagcctctccgcacgagtctccacagtccagtaatgga
ttttacctacaggtcaccaaagacgctcagcaggggggacgagcgatggggaatgtccct
gtccagacccctgcctcttcttcttctaccccacaggtaccaccggccccccctcaagca
gctgcaaccatccagcctcctccagctgaagctcctcaaacgtctcaggctgcaccgccg
ggaccacgttatgctgctccggttcctgtgagtgcagcacccccctcccgtgaccagtac
ccacctccggcacttgctgcaggggatgcataccctccaggacctcgaggacctgcacct
ccaggagctccccagcctgctcctggtgagccccctcgaccaccctcctctgcaggcagc
cagcagggctatgggccccctcctcctccagggccagggcagatgtatggtggctattat
ggtaattatggagaatacccggacggcagagcagcttatcctcctggccagtacccgcct
cagcctcctggccagtacccgcctcagcctcctggccagtacccgcctcagcctcctggc
cagtacccgcctcctccaccacccggggatcctagagctcaacaatattatccagatggt
tcgtacaggggcagagctgatccgtggtacggcagatatgaaggacaggcggcagcttat
cgggatccaaaccttcagtacagagagcctcagccggagagacccagctccagagccagc
cagtactctgaccgctcctcctccaggcaaggctaccctgaagatcccaacagagcaaac
caaagtgcctacaatgaatactatgcagattacgccaagcactatgattatggagcgtac
aactatggagcgtatgacccgcgataccgagcatactatgatcaggcctgggctaattac
gatgaaagctgcagaggcagagaaaactactataatcagcagcaacaagcgtatcctgcc
aggaaagagggcttcgaggatcagtggcggtactaccccggttatgatgccagttttgat
gatgattaccgtcgccgtggagaagcgttcggggatgactttgaccgccgcagtgtccac
agtgagcagtcggcccacagcgtgcacagcgcccacagcaacaccagccgcaggagcagc
ttcagctcacgatcacagccgagccaggtgtacagaagccagcctgacctggtgtcagcc
gtctatgacaccacctcttccactctggctgtggactactcctacgcacagtaccagaac
cacgccgatgctacacagaactacagccagtacctgtacccctccgagtacaacgcagac
agcacctggaccgcccccgagcaacctcctcctcgtcctgcaaccccagagaagttcagc
atgccccaccgctgtgcccgctttggccccggtggtcatctggtccaagtcctgcccaac
ctgccctcagctggccagcctgctctcgttgatatccacaacctggagaccatgctgcag
gatacccccgaacaggcagaactgcgggctttccctggccctcttgtgaaggaagagacc
cataaggtggatgtgatcaagttctctcagaacaaagctctggagtgcgcccgggacaac
aacctcctcgaccgggactctgcccgcctgctgtgggacttcatcatgctgctctgcagg
cagaacgggacggtggtcggcacggacatcgctgacctcctgctgaaggagcaccgctcc
gtctggctcccggggaaaagtcctaatgaagccaacctgatagattttaacaacgagccg
ctggctcgagctgaggaggagctgggcgccgggccgctgtctctcctctccgacactttc
atgatcgtcccagaaaacctgggcaaggaaacggaacgcttcagagagctgctgctgttt
ggccgcaagaaggatgcactagaagcagctatgaaggggggcctctggggccacgccctg
ctgttggccagcaagatggacaacaggacgcatgcacgcgtcatgacaaggtttgccaac
agtctgcccatcaacgaccccctgcagacggtgtaccagctgatgtcagggaggatgccg
gcctcagccacttgctgcggagaggagaagtggggcgactggcgcccccacctggccatg
gtgctgtctaacctcacacacactctggacctggatacccgcaccatcagcaccatggga
gacactctggcttccaaggggctgatcgatgcggctcatttctgctacctgatggcccag
gtgggtctgggagtttacacaaagaagagcaccaagatggttctgattggctccaaccat
agtatgccctttttccaatgtgcgagcaatgaagccatccagaggactgaggcctatgag
tacgctcagtctctgggctcccagccctgcttacagcccaacttccaggtgttcaagttg
atctatgcatgccgcctagctgaagccggtctgagtgctcaggccttccactactgtgaa
gttatttcgaggactgtcctcatgcagccttcattttactctcctgtgttcataagccaa
attatacagatgtcagagaagctgcgattcttcgatccacaactgaaggagaagccggag
caggagctgtttgtggaacctggatggctgagccacctcaggcagctggacggacagatt
cggacgggggtgatcacctacagcttggacagagccccctcctctcagtacgactgcagc
agccccagctcggacctggaccagctcagcccctctgagccctacaacatgccggtggag
atggacggccccgacaaccagctgatgagctcattactgccaggccccccgcagcaggga
gtgcagctgatgcctccagctcccacctctatcctccaagacgggatggcccctcctcag
catttccaacccaacgacgtgccccagttctacccggtcccccccagcggacccccgggc
cagatgccagtctccccaagctaccctccgcagggccccgtcttcgccccccctcccttc
cagcctcaacctgagcagatagagatgttcccaggggcccatcagcaacccccacctcct
caaatgggccaaatgtccccgcatgcaccgcacccccctatacagatgaaccccccacca
ctgcagatgcctcagcacatgcccccctctcctatgcacatgccccctgccgagccgatg
atccatagcccccctgagatgcatcagatgccctccttcaccccgcagagggacttctac
gaccaaatggcgaccatgggtcctgggaggaggtcgaggactgtctcgcaatcttcaatg
catatgccttcggggcggcgctctcgcaccacctcggagtcgtccacccactctggagca
agagagaggagcaactcggtggtgaagcaggcctcgcctcctcccccctccatccctgag
cagccccgcagagaggaggccaagagagccaagaagaactccccgaaaaagggcgggggc
gggggaggggtcggaggcctgctgagctggatcatcaggaaggggaagaacgaggcgcac
ctgccggacgacaacgacaagtctatcgtttgggacgagcagaagcagagatgggtggac
atgaacgagccggagcaggagagtaagcctccgccccccccccccctgnncatccccaag
atggctcagatggctgggcccactgcccccccgagcgggggtccgcctgtcaacatgttc
tccaggagggcaggcacaaagagcagatacgtggacgtgctgaaccccagccgagctgct
acagctggagggttcgcccccgctccggcagacttcttcgctcctctggctccaatgtcc
atgcctgccaacctgttcgtgcctagctcagctcctaccgaccagcagcctctggaggga
agtgaaggaggacaccaggagcagaactcaccaaacacccacgcggctccacagatgttc
aaccccacgctgttaccccccgctccagaaggccaccccgtgccggacggctctcagtcc
ggggagctctcacgttctagctcaatgagttctttatcacgcgaaagcccccctgccccc
gcacctccccccgctggaggcgtcaccttttataaccctgcacagtttgcacaggcgagt
gcaccatcgggggggggacaccgccccgggcgtctgggcggacagcggcagtacccaccg
tcaaaataa
DBGET
integrated database retrieval system
