Pseudochaenichthys georgianus (South Georgia icefish): 117455768
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Entry
117455768 CDS
T09629
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117455768 (rnf34b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117455768 (rnf34b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117455768 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
zf-C3HC4_2
zf-RING_5
PI3K_1B_p101
Sporozoite_P67
DNA_pol_phi
CDC45
Motif
Other DBs
NCBI-GeneID:
117455768
NCBI-ProteinID:
XP_033951215
LinkDB
All DBs
Position
12:complement(18376784..18399100)
Genome browser
AA seq
413 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGTVRAQQPGFGAGAGPFRFAPSAGYSTYPPTASGSAGQ
LCKACGLAFSVFRRKHICCDCKKSFCALCSVLQEELWCCSTCHLLRSTAFQRPRLMQLRV
KDLRQYLLLRNISTDTCREKEDLVDLVLCHQGTRETSTPGEGDEEEDDDEEEDDEEDTHE
DDDEEEDEGEEDTDSLHSLPHSRPASPPSATRSASEQSALSASQGDVLSPSDSSGTSQEQ
EDTPTASLLNLEPTETLMEVSPATQRRIRASLSDLDNEEAIENLSVRQLKEILARNFVNY
SGCCEKWELLERVHRLYRENEHNRKSMENVSITPNTCAVVAYPPPLCNSGVGDGVKAQLA
ADDNLCRICMDAIIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggggcatcgtccatgtgggcgtcatgctgtgggctgctgaacgaggtgatg
ggcacgggcaccgtgcgggcgcagcagccggggttcggagccggggccgggcccttccgc
ttcgcccccagcgctgggtactccacctacccccccaccgcctcagggagcgccggacag
ctgtgcaaagcctgcggactggccttctccgtcttcagacgcaagcacatctgctgtgac
tgcaagaagagtttctgcgccctgtgctcggtgctgcaggaggagctgtggtgctgctcc
acctgccacctgctccgtagcaccgccttccagaggccgcggctcatgcagctccgcgtc
aaagacctacggcagtacctgctgctgcgcaacatctccacagacacctgcagggagaaa
gaggacctggtggacttggtgctgtgtcatcaggggacgagagaaacctccacaccgggg
gagggagacgaggaggaggacgacgacgaggaggaggatgacgaggaggacacgcatgag
gacgacgatgaggaggaagacgaaggggaggaggacacagacagtctgcactcgctcccc
cactcgcgccccgcctcccccccctccgccacgcgctccgcctcggaacagtcggccctc
tccgcctctcagggagacgtcctcagccccagtgacagctcagggaccagccaggaacaa
gaggatactccaacagcatctcttttgaacctggagcccactgaaactttaatggaggtc
agtccggcgacacagaggaggatcagggcctcgctgtctgatctggacaatgaagaggcg
atagaaaacctctccgtgcgccagctcaaagagattctcgccaggaactttgtcaattac
tccggctgctgcgagaagtgggagctgctggagcgagtgcatcgactctacagagaaaat
gagcataacaggaaatccatggaaaatgtgagcataacacctaacacatgtgcagtggtt
gcatatcctccacctctctgcaacagtggagttggagatggtgtcaaagctcagctggcg
gctgatgataacttgtgtcgcatctgcatggatgccatcatcgactgcgtgctgctggaa
tgtggtcacatggtaacctgcaccaaatgtggaaagaggatgagcgagtgccccatctgc
aggcagtatgtagtgcgggccgtgcacgtcttcaagtcttaa
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