Pseudochaenichthys georgianus (South Georgia icefish): 117455835
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Entry
117455835 CDS
T09629
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117455835 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117455835 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117455835
NCBI-ProteinID:
XP_033951320
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Position
12:27508220..27575259
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AA seq
1206 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPSNKKV
SRLEEHEKDVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPAPPTPPAESSVSSELPSIGLEQEVSPQTAPAAPPAEEASEIPEEEVAPP
KPPLPEAKMAELRAQLSAGAGQRRSSQKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSS
LPCSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQ
CSRNTSCETLDNTESYDPDYDFLHQDLSAGENLPPIPVGGCLSPLPESHSESSSPVPGQH
PSHPRFSAPPPQQQPEYWTPQTHHPNPLLLSRLSAPPALPQKKRRSTPSPFPDGGSRVLY
ERYPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVSQYLTGENADVASSPPPLPEK
KSRHILQYMQFVEDYSEPQPSMFYQMPQSESIYEQRNKRFQEVYCFNDSFSSTDSVHEPV
LPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSGLGLSMSVSNSYLIGQA
SLNTPTSLDQVALTNATILDGGGGGGPNGSLAGSMGSVAVCLPSESSLTDSLHTSSSECA
NDEGGEGEYVNLYSSNQANGELPRSLRESITADDVLQDPSPQIPSTNSKEALDKERRQKS
PESAGSDEEDVDELSLIDHKEIMSRITLKQANDDGPDVRAGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVEL
TEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPG
TLHDFRSHEIADQLTLLDAELFYKIEVLEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSY
WVRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTS
EGLEEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSK
RWQQFNILDSMRRFQQVHYDLKRNEDIVCFFNDFSDHLAEEALWELSQKIKPRNITRRKT
EREEKT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagcaagcaagactcgcagcggtcccatctgtcctccttcacc
atgaaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcagctgcagcccgagccggcagccaagagcaccgagaaaccttccaacaagaaggtg
agtcggctggaggagcacgagaaggatgtggtcagtgctctgcgctacttcaagaccatc
gtggataagatggtggtggagaagaaggttctggagatgctgcccggctctgccagcaag
gtgctggaggccatcctgcctctggtgcaggtggaggcccggatccagcacagttcggcg
ctgtcttcctgccataatcgcgtctaccagagtctggccaacctcatccgttgggcggac
caggtgatgctggacggcatcgacctggaggacaaagagaacgtggcgtcggtcaccagc
gtcatcaaagccgtgctggacggagtgaaggaattggtgaagctgaccatagagaaacag
gagcagccgtcgcccaccacccctaacaaaccagccccacccactcccccagcagagagc
agcgtgtcgtcggagctgccctccataggtctggagcaggaggtctcccctcagacggct
ccggctgccccccctgcagaggaggcttctgaaataccagaggaggaggtggcccctccc
aaaccccccctgcctgaggccaaaatggcagagctcagagcacagttgagtgctggcgcg
ggccaaaggagatcctctcagaaggagaaccctcccccagctctcccccctaagaagcgg
cagtcggccccctcacccacgcgggttgcggtcgtggccccgatgagtcgcggctccagt
ttaccctgcagcgtccacagacagcagcaggactatgagcaggagttcctgcagaggcgg
ttctccggggggagccagtcgtacgggggggactctccacgcctctcgccctgcagcagc
atggggaagctcagcaagtcggacgagcagctctcctccatggagcaggacagtggtcag
tgttctcgtaacaccagctgtgagacgcttgacaacacagagagttacgacccggactac
gacttcctgcaccaggacctgtcggcgggggagaacctgccccccatcccagtggggggg
tgcctgagccccctgcccgagtctcacagcgagtcctcctcccccgtccccggacagcac
ccctcacacccccgcttcagtgccccccctccccagcagcagccagaatactggaccccc
cagacccaccaccccaaccccctgctgttgtcccgcctcagtgctccccccgccctcccc
cagaagaagcgccgcagcaccccgtcgcccttccccgacggggggtccagggtgctgtat
gagcggtacccctcccaatatgataacctatcagaagaggagctgcaccccacgccaccg
ttccccctcttcacccccatctcccccatgccacagacaaacggaggggtgtttgtctcc
cagtacctcactggcgagaacgcagatgttgcctctagcccccccccactaccagagaaa
aagagcagacacatcctccagtacatgcagtttgtggaggactactcggagccgcagccc
tccatgttctaccagatgccgcagagcgagagcatctacgagcagcgcaacaagcgcttc
caggaggtgtactgcttcaacgactccttcagcagcaccgactcggtgcacgagcccgtg
ctgccccctgctctgccgcccaaacagaggcagctggcctcccactcttcctccccctct
tcctcctcctcctcttctctctcctgccacctccagccgtctgtggcggcgatggaggag
gcgggctctgggctgggcctcagcatgtccgtttctaactcctacctgattggccaagct
tctttgaacacacccacgagcttggaccaggttgccttgaccaatgccaccattctggat
ggcggcggggggggcgggcccaacggttccctggccggctcaatgggctctgtggctgtc
tgtcttccttctgagtcttctcttactgactcgctccacacctcatcgagcgagtgcgca
aacgacgagggcggggagggcgagtacgtcaacttgtactcatccaaccaggccaatggg
gagctgcctcgctccctcagagaatcaatcacagctgacgacgtgctccaggatccctcc
cctcagatcccctccaccaatagcaaagaggctctggacaaggagaggagacagaagtca
ccagaatcggccggcagcgatgaggaggacgtggacgagctctccctcatcgaccacaaa
gagatcatgagcaggataacactaaaacaagcgaatgacgacgggcctgacgtccgtgct
ggatcgggagatattctattggtgcacgccacagaaacagaccgcaaagatctggttttg
tactgtgaagcctttctgaccacgtataggactttcataaccccagaggacctcattaag
aagctacactacagatacaccaggttctgccacagccccgacaccttcaagaagagagtc
agcaaaaacaccttcttcgtgctggtgagggtggtggacgagctgtgcctggtggagctg
acggaggacatcctgaagcagctgatggacctggtgttcacgctggtctgtaacggagag
ctcagcctcgcgcgggtcctccggaagaacatcctggataaagtggagcagaggaagctg
ctgcgctacaccaactccctcaaaccgctcgctgcccggggggtctctgcaaggccaggg
acgctccatgacttccgcagtcacgaaatcgctgaccagctcactctccttgatgccgag
ctcttctacaagatcgaggtacttgagattccagaggtgctgctctgggcgaaggagcag
aacgaggagaagagtcccaacctgacgcagttcacagagcactttaacaacatgagctat
tgggtccgctctctgatcattcagcaggagaaagcccaggacagagagaagctgcttctc
aagttcattaagatcatgaagcacttacggaagttgaataatttcaactcttacctggca
atcctgtccgcgctggactctgcgcccatccggaggctggagtggcagaagcagacctcc
gagggcttggaggagtactgcacgttgattgacagctcgtcgtccttcagagcgtaccga
gctgctctctctgaggtggagcccccctgcatcccctacctgggtctcatcctgcaggac
ctgaccttcgtccacctggggaaccccgacttcatcgaggggaaggtgaacttctccaaa
cgctggcagcagttcaacatcctggacagcatgcggcgcttccagcaagtgcattatgat
ctgaagcgcaacgaagacatcgtgtgcttcttcaacgacttcagcgaccacctggcggag
gaggcgctgtgggagctgtcgcagaagatcaaacccaggaacatcaccaggcgcaagacg
gagcgtgaggagaagacctag
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