Pseudochaenichthys georgianus (South Georgia icefish): 117455861
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Entry
117455861 CDS
T09629
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117455861 (srek1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
117455861 (srek1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_3
Motif
Other DBs
NCBI-GeneID:
117455861
NCBI-ProteinID:
XP_033951365
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Position
12:complement(22571088..22580290)
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AA seq
483 aa
AA seq
DB search
MSGIPGTAVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYPPDNAPLSFSSKVCYIKYRD
PSSVCVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPAPSLIPGGGLLPIPT
PAPAPAPLQNLNVPAVSRLSAALDPTASSLTQAPLMGNVDPSKVDEIRRTVYVGNLNSQT
TNADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFVGQESVNRALTFNGVMFGDRPLKV
NHSNNAIVKPPEMTPQAAAKELESVMKRVREAQCTIAAAIDPADLKKRSPSRSQRLCRSR
SRSRSRSKMHRKRSRSKQSRPAPKLCPKNDSHNSRSSHRRSSLSRDKKHSRSRSMGSRDL
GGHRRKSKDRSRSPRRKARSPSPKRGRKDKRGERSRDRKERSTSRKKSRKDEERMKSKAK
PMKVERDYDREEKDEYESDREDTLSEGMMSSPCAQQNGSYKTHNEYASMGADNNKGLFHR
HGN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggataccagggactgctgtcgtccaggttaccaacctgtcctcggccgtgagc
agcgagcagatgcgcaccctgtttggcttcctgggagacatcgacgagctgcggctctac
ccgcccgacaatgcccctctgtctttctcgtccaaagtgtgctatataaagtaccgggac
ccctccagtgtttgtgtggcgcaacatctcaccaatactgtttttattgacagagctttg
atagtggtgccatgtgcggaagggaaaatcccagaagaggccaaagccttgtctcttttg
gcgcctgccgctccagcacctagtctaattcctggtggggggctgctgccaattcctact
cccgctcccgctccagctccccttcagaatctgaacgtccctgcagtgagtcggctgtca
gctgctctggaccccacagcatcatcgctcacccaggcccccctcatgggaaatgtggac
ccctcaaaagtggatgagatcaggaggaccgtctatgttggcaacttgaactcacagacc
accaatgcagaccagctgctggagttcttcaagcaggtgggcgaagtgaagtttgtgcga
atggctggagatgagacccagccgacacgcttcgccttcgtagagtttgttggccaggag
tccgtcaacagagccctgaccttcaatggagtcatgttcggagacagaccgctgaaggtg
aatcattccaataacgccatagtcaaacccccggagatgacgccacaggctgcagctaag
gagctagaaagtgtgatgaagagggtgagggaagcacagtgtaccattgctgctgccata
gatccagctgacttaaagaaacgctcccccagtcgctctcagagattatgtcgctcacgg
tcaagatcccgctctcgctcaaaaatgcacaggaaaagatcccgctcgaaacaaagcaga
ccagcgccaaagttgtgtcccaagaatgactcccacaattcccggagcagccacaggagg
agctctctctcccgagacaagaaacatagtcgcagtcgctctatgggatctcgggatctt
gggggccataggaggaagagtaaggatcgctcaaggagcccccggaggaaagcaaggtca
ccctccccaaaaagaggaaggaaagacaagaggggggagcgcagcagggacaggaaggag
cgctcaacatccaggaagaagagccgcaaggacgaggagaggatgaagagcaaggccaag
ccaatgaaggtggaaagggactacgacagggaagagaaggacgaatatgaaagtgaccga
gaggacacgctcagtgagggcatgatgtcatcaccctgcgcccagcagaacggcagctac
aagactcacaatgaatatgcatcaatgggtgcggacaacaacaagggactattccatcgc
catggaaactaa
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