Pseudochaenichthys georgianus (South Georgia icefish): 117455915
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Entry
117455915 CDS
T09629
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04210
Apoptosis
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117455915 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117455915 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117455915 (sptan1)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117455915 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
117455915 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
117455915
NCBI-ProteinID:
XP_033951435
LinkDB
All DBs
Position
12:complement(28688295..28742057)
Genome browser
AA seq
2480 aa
AA seq
DB search
MDTAGAKVLETADDIQERRQQVLDRYRRFKELSIMRRTKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDDTGNLMITEGHFSSETI
RTRLEELHRLWDLLLMRTKEKGTRLLQAQKLVQYLRECEDALDWISDKETMATSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQEAHPEAELIVRKQDEVNAAWQRL
KGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAERLQQTHPHNASQIHLKKDELITNWEQIRTLAAERHTRLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRST
DEAGQALLDTGHYASEEVKEKLGILSSERESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVADRMEEVGSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALMSRYEGLREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRI
KAVSQKGEAMVEEGHFAGEEVKVKLGELHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSASRENLLDEHGSIALRQDQADNQLVTKEACSVSVRMKQVEELYGTLLELGE
KRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEMGSDLEQVEVLQKKFDDFQKDLK
ANESRLRDINKVASELESEGLMAEEAPMVQAQQQQEMLGSAPGKDEADSKTASPWKNIRV
AVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTEL
NTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEAL
LERHQEHRTEIDARAGTFQAFEQFGQQLLVRGHYASPEIQQKLEALDHERADLEKAWVQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQ
EEKIAALQSFANQLVEADHYARPEISNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDT
GNTLIERGACAGSEDAVKARLSALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDF
WLSEVDALLASEDYGKDLASVNNLLKKHQLLEADVSAHEDRLKDLNCQADSLMGSQAFDT
SQVKDKRDAVNGRFAKIKSMAAGRRGKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDY
GRDLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHW
KELKDLSGARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKH
EAFETDFTVHRDRVSDVCTNGEELIKKNNHHVDNISAKMSALRGKVSELERAAAQRKAKL
DENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEG
ITNITALKDQLLAAKHVQSKAIEARHAALIKRWNQLLSNSSSRKKKLLEAQEHFRKVEDL
FLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFNQLAE
LDQQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQ
HANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAM
EEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMF
KHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYM
AFMISRETENVKSSEEIESAFRALSTEAKPYVTKEELFQNLTKEQADYCLSHMKPYLDSK
GRELPSAFDFVEFTRSLFVN
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcaggggccaaagtgctggagacagccgatgacatccaggagcgccggcag
caggtgctggaccgctaccgccgcttcaaagagctgtccatcatgcggcgcaccaagctg
gaggactcttaccgcttccagttcttccgccgcgacgccgatgagctggagaagtggatc
caagagaagctgcagatcgcctctgatgagaactacaaggacccctccaacctgcagggt
aagctgcagaaacatcaggcctttgaggctgaagtccaggcgaacgcgggggccatcatc
aaactggacgacactgggaacctgatgatcacagagggccacttctcctctgagaccatc
cgaactcgcctggaggagctgcatcgcctctgggacctcctgctgatgaggaccaaggag
aagggcacgcgcctcctgcaggcccagaagctggtccagtacctgcgtgagtgtgaggac
gccctggactggatcagtgacaaggagaccatggccacctcggaggagctgggccaggac
ctggagcatgtggaactcttgcagaagaagtttgaggagtttcagaccgacctggctgcg
cacgaggagcgtgtgaacgaggtgaaccagctggcagccaagctgatacaggaggcccat
cctgaggcggagctcatcgtccgcaagcaggacgaggtgaacgccgcctggcagcgcctg
aagggcctggcccagcagaggcagggccggctgttcggggcggctgaggtgcagcgcttc
aacagggatgtggatgagaccatcagctggatcaaggagaaggagcagctgatggcctct
gatgactttggtcgtgacctggccagtgtgcaggctctgcttcgcaaacacgagggtctg
gagagagacctggctgctctggaggataaggtcaacacactgggtggagatgcagagcgc
ctgcagcagacacacccccacaacgcctcccagatccacctgaagaaggacgaactcatc
accaactgggagcagatccgcactctggccgcggagcgccacacccgcctcaacgactcc
taccggctgcagcgcttcactgctgacttcagggatctgaccagctgggtgacggagatg
aaagctctgatcaatgctgacgagctggccaatgacgtggctggagctgaggctctgctc
gaccgccaccaggagcataagggagagatcgatgcccacgaagacagtttcagatccact
gatgaagcgggccaagcattgctcgacacagggcactatgcctctgaggaggtcaaggaa
aagctgggcatcctttcctcggagagggagtccctgctggagctgtgggaggtccgcagg
cagcagtacgagcagtgcatggacctgcagctcttctacagggacactgagcaggttgac
aactggatgagcaaacaagaggctttcctcctcaatgaagacctgggggactccctggac
agtgtggaggccctgctgaagaaacacgaggactttgagaagtcactcagtgcccaggaa
gaaaagatcaccgccctggatgagtttgctaccaaactgatccagaacaaccactatgcc
aaagaggacgttgctactcgcagagatgctttgctcagccgccgcaacgccttgcatgaa
cgcgctcagtctcgccgtgctgctctggaggactccttccacctgcagcagttcttcagg
gactctgatgagctcaagagctggatcaacgagaagatgaagaccgccacagatgaggct
tacaaggacccctccaacctccagggcaaggtgcagaagcaccaggcctttgaagctgag
ctttcagccaatcagagccgcatcgatgccctgcagaagtctggccaggagctgcttgac
ggaaagcattacgcctccactgaggtggccgaccgcatggaggaggtcggctcccagtgg
aagaaacttctggaggccaccgagctcaaaggtatcaagctccgtgaggccaaccagcag
cagcagttcaacagaaacgtggaggacatcgagctgtggctgtatgaggtggagggacac
ctagcttcagacgattacgggaaagacctgaccagtgtccagaacctgcagaagaagcat
gcactgctggaggccgacgtggcagcccaccaggatcgcattgatggcataactatccag
gctcgccagttccaagaagctggacactttgatgcagacaacatccgcaagaaacaggag
gctttaatgtcgcggtatgaaggtctgcgcgagcccatggctgcacgcaagcagaagctg
tccgactctctgcggctgcagcagctgttcagagatgtggaggatgaggagacttggatc
cgtgagaaagagcccattgctgcctcgactaacagaggcaaagacctgattggtgtccag
aacctgctgaagaagcaccaggccctgcaggcggagatcaccggccatgagcctcgcatt
aaggctgtctcccagaaaggagaggccatggtggaggaaggacactttgccggggaggag
gtgaaggtgaagctgggtgagctgcatggacgctgggacacgctgaaggccaaggcttcc
cagaggagacaggacctggaggactctctgcaggcccagcagtactttgctgatgccaac
gaggctgagtcctggatgagggagaaggagcccatcgtggggagcccagactacggcaaa
gacgaggactctgctgaggcgctgctgaagaagcacgaggccctgatgtcggacctgagt
gcttacggcagcagcattcatgctctgaaggagcaggcccagtcctgcaggcaacaagtg
gccccgactgatgatgagaccgggaaggagctggtgctggccctgtacgactaccaggag
aagagcccccgtgaagtcaccatgaagaagggggacatcctcaccctgctcaacagcacc
aacaaggattggtggaaggtggaggtgaacgatcgccagggcttcgtccctgctgcctac
gtgaagaagctggaccccacccagtccgcttcaagggagaacctgctggatgaacacggc
agcatcgccctgcgccaagaccaggcagacaatcagcttgtcaccaaggaggcctgcagc
gtgtctgtgcgcatgaagcaggtggaagagctgtatggtactctgttggagctgggagag
aaacgcaaggacatgctggagaagagctgcaagaagttcatgttgttccgcgaggccaac
gagctgcagcagtggatcaacgagaaggagggcgccctcaccaacgaggagatgggctct
gacctggagcaggtggaggtcctgcagaagaagtttgacgacttccagaaggacctgaag
gccaacgagtctcggctgagggacatcaacaaagtggcgtctgagctggagtctgagggc
ctcatggcggaggaggcccctatggtccaggctcagcagcagcaagagatgctcggctct
gctcccggcaaggatgaagctgattccaagactgcatctccatggaagaatatacgcgtg
gctgttcaaacaacggctaactttaatactatcaaggagctgaacaatcgctggcggtcc
ctgcagcagctggctgaagaaaggagcaacatgctgggcagcgcccacgaggtgcagcgc
ttccacagggatgctgatgaaactaaagagtggatcgaggagaagaaccaggccctcaac
acagacaactacggccatgacctggccagtgtgcaagctctgcagcgcaaacacgaaggc
tttgagagggacctggcagctctgggagataaggtgaactctctcggggagacagctgag
cgtctgatccagtcccaccctgaggccgtggacgacatccaggagaagtgcacggagctg
aacaccgcatggagcagcctggtggggagagctgaccagcgcaaagacaagctgggcaac
tcccacgacctgcagcgcttcctgtccgacttcagagacctgatgtcctggatcaatggc
attcgggggctggtgtcctcggaggagctggccaaagatgtaaccggagctgaggccctt
ctggagagacaccaggaacaccgcacagagatcgatgctcgtgctggaaccttccaagcc
tttgaacagtttggtcagcagttgctggtgcgcggccactatgccagtcctgagatccag
cagaaactagaagctctggaccatgagcgtgctgacctggagaaggcctgggtgcagcgc
cgcatgatgttggaccagtgcctggagctgcagctcttcaacagggactgtgagcaggct
gagaactggatggccgctcgggaagctttccttgctagtgatgacaagggtgactccctg
gacagtgtggaagccctcatcaagaaacatgaagactttgacaaggccatcaacgtgcag
gaggagaagatcgccgctctgcagtcctttgctaaccagctggtggaagccgaccattac
gccagacctgagatctctaaccgccgaaatgaggtcctggacaggtggcgccggctgaag
gctcagatgatcgaaaagcgttccaagctgggtgagtcgcagaccctgcagcagttcagc
cgggacgtggacgagatcgaggcttggatcagcgagaagctgcaaactgcaacagacgaa
tcctacaaagaccccaccaacatccagctgtccaagctgctgagtaagcatcagaaacat
caggcgttcgaggccgagctgcacgccaacgcagaccggatccgcggggtcatcgacacg
ggaaacaccctgatcgagagaggagcctgcgccggcagcgaggacgcagtcaaggcgcgc
ctcagtgctctggatgagcagtggcagttcctcgtcaacaagtcagcggaaaagagccag
aagctgaaggaggccaacaagcagcagaacttcaacaccggcatcaaggacttcgacttc
tggctctctgaggtggacgctctccttgcctctgaagactacggcaaagatctggcctca
gtcaacaacctgctgaagaaacaccagctgctggaggccgatgtctctgcgcatgaggat
cgcctgaaggatctgaactgccaggcggacagcctgatgggcagccaggccttcgacacc
tcccaggtgaaggacaagcgcgatgccgtcaacggccgcttcgccaagatcaagagcatg
gctgcagggcgccggggcaagctcaacgagtcccaccgcctgcaccagttcttcagggac
ctggatgatgaagagtcttggatcaaagagaagaagctgcttgtgagctccgaggactac
ggacgtgatttgacaggagtacagaatctgaggaagaagcacaagaggctggaggcggag
ctgggagcccacgagccggccatccagtcggtgctggacactgggaagaagctgtctgat
gacaacaccatcgggcaggaggagatccagcagaggctggcccagttcgtggaccactgg
aaggaactcaaagacttgtctggagccaggggacagaggctggaggagtcgctggagtac
cagcagtttgtggcgaacgtggaagaggaagaagcttggattaatgagaagttgaatctg
gtggggagcgaggactatggagatacactggctgctgtgcagggcttgctgaagaagcat
gaagcatttgagactgactttaccgtgcacagggacagagtcagcgatgtgtgcactaac
ggagaggagctgatcaagaagaacaaccatcatgtggacaacatcagcgccaagatgtcg
gcactgagaggcaaagtgtcggagctggagagggccgccgctcagaggaaggccaagctg
gacgaaaactctgccttcctgcagttcaactggaaggcggatgtggtggagtcctggatc
ggagagaaagagaacagcctgaagactgatgactacggcagagacctgtcctctgtgcag
accctgctcaccaagcaggagacttttgatgccggtctgcaggccttccagcaggagggc
atcaccaacatcacagcgctcaaggaccagctgctggctgccaaacatgtccaatcaaaa
gccatcgaagctcgtcacgctgccctcataaagcgctggaaccagctgctgtccaactcc
tcatctcgcaagaagaagcttctggaggctcaagagcacttcagaaaggttgaggacttg
ttcctgacatttgccaagaaggcatcagccttcaacagctggtttgagaatgctgaggag
gatctgacggacccggtccggtgcaactctctggaggagatccgggcgctgcgcgaggcc
cacgaagcgttccgttcctcgctgagctccgcacaggccgacttcaaccagctggcagag
ctggaccagcagatcaagagctaccaggtggtgtccaacccctacacctggttcaccatg
gaggccctggaggagacctggaggaacctgcagaagatcatcaaggagcgagagctggag
ctgcagaaggagcagaggaggcaggaggagaacgacaagctgcgtcaagagttcgctcag
cacgcgaacgcgttccaccagtggctgcaggagaccaggacttatcttctggacgggtcg
tgtatggtggaagagtctggaaccctggagtcccagctggaggccaccaagcgtaagcac
caggagatccgggccatgcgcagccagctgaagaagatagaagacctgggagcagcgatg
gaggaagcgctgatcctggacaacaagtacacggagcacagcacggtggggctggcccag
cagtgggaccagctggaccagctggggatgaggatgcagcacaacctggagcagcagatc
caggccaggaacaccaccggagtgacggaggaggctctgaaggagttcagcatgatgttc
aagcatttcgacaaggagaagtctggccgtctgaaccaccaggagttcaagtcctgtctg
cgctctctgggctacgacctgcccatggtggaggagggggaacctgaccccgagtttgag
gccatactcgacactgtggatcccaacagggatggcaacgtgtcgctgcaggagtacatg
gccttcatgatcagccgagagaccgagaacgttaagtccagtgaggagatagagagcgcc
ttccgggccctcagcacagaggccaagccctacgtcactaaagaggagctcttccagaac
ctgaccaaggagcaggcggactactgcctgtcgcacatgaagccctacctcgacagcaag
ggccgcgagctgccctcagccttcgacttcgttgaattcacccgctcgctctttgtcaac
tga
DBGET
integrated database retrieval system
