Pseudochaenichthys georgianus (South Georgia icefish): 117455927
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Entry
117455927 CDS
T09629
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
pgeo04150
mTOR signaling pathway
pgeo04218
Cellular senescence
pgeo04910
Insulin signaling pathway
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117455927 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117455927 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
117455927 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117455927 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117455927 (tsc1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
Remorin_N
SulA
Motif
Other DBs
NCBI-GeneID:
117455927
NCBI-ProteinID:
XP_071061054
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All DBs
Position
12:5288311..5317060
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AA seq
1064 aa
AA seq
DB search
MYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKDHELDPTRWKKYEIH
DIVIECAKVSLDPKEASCEEGYATVPENFYPQIHLRPQDCTSSPYTDLHSSYGCSSSTPF
STTRLPPPLSLPPFSGTQSSSRSPQTSRRQNSTSELNSSCGGKDPLWSPSSLCGMATPPS
SRGMSPNLELSHSASHLPSRFHCTSGGKGTPASSTPATSSPPHNLSDDFSIISLPANTVQ
SSPPRKDRRQGESSKPALVRQEPVKETEKSAEGSANRDAGAAEIVSMTLTELSVFMKKQE
LELQLRTEKEREEAAITEELLKITEEKQELSGLRGFDSPFYHTTETLTGCQAQDKTLANA
QPGDPVTHPVESTPDKGENTSGAGSEREGRGAGDSRSSALDQSWSFQSGFTPIDHHLHRS
PSAPDDEVGKFGMFSPSPCSKTPGAIMPYESFFDLALPRAVSLFVGQKTSEAVHKAALER
LLQQQEEGLEDGEEEGVVTASPLEVLDRLVQQGSDTHDKVLKRLPLPSSAPLDELHTLRS
QLLLLHNQLLYERYKREQHAVRNRRLLRRIINATALEEQNNAMKDQLNLQSVDIVSLRES
LQVEQQRYRQLWDDRETVVTRLHSQIRQLQQGRDDYYTKNQELQSKLQEGQKRIDDLEAE
LQRANNKVCHTGHLLNQMTIKLSNSESTQQQMSFLNKQLLLLGEAHKLSMQDLQHGGTDN
TKETQMRKVSYGNEVETLKQSLLVQGQKLEAAQQRVAELETHLSKKEHLIAEQKKFLEDV
KCQAKAELQASDSRYQAQRRITQTLQTELLQLYSRVEMEAPVSTVSSPPPGGRADPQTCA
DSSVTVPGGRSKPHTIEELVDGRPPRDSSRGNSSTLSPRQPKVSNSSKTAAAANSMNGSQ
DPAPPPLLVESSLTCPYGNPLTLLPPCDAPITVGSYPSAKSFLGMRARELFRNKSESQCD
TEQPATRLSGLAHGLKTDMCVEPSCPGYGAPIGPVPSSTPTPTPATPLTVPTPSEPKQRA
TSQESPRRKAASASGGGRDQAGSGRPRQQQLKIMDYNETHHEHS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgtgcaacttcgtgtcctacctgcgctcccattacagcatgaaggagaacatg
gaaacctttgaagaagtagtgaagccgatgcttgaacatgtccgtattcacccagaactg
gtgacgggaaccaaggaccacgagctggaccccaccaggtggaagaagtatgaaatccac
gatatcgtcatcgaatgtgccaaagtgtctctcgacccgaaggaggcctcctgtgaggag
gggtacgccaccgtccctgagaacttctacccccaaatccacctgcgaccacaagactgc
acttccagcccatacactgacctccacagcagctacggatgctcctcttcgaccccgttc
tcgactacgcggctccccccgcccctgtccttgccccccttctcagggacacagtcctcc
tcccgcagcccacagacctccagacggcagaactccacctctgaactcaactcttcctgc
ggggggaaggaccctctgtggagcccctcctcattgtgcggcatggccacgcccccttcc
tccaggggcatgtcgcccaacctagagctctcccacagtgcctcacaccttcccagccgc
ttccactgcacatcaggagggaaaggaacgcctgcctccagcactccagccacctcctcc
ccgcctcacaacctatcggatgacttctccataatctccttaccagccaacacagtccag
tccagtccacctagaaaggaccgccgacaaggagagagcagtaagcctgcgctggtgaga
caggagcccgtgaaagagaccgagaagagcgcagaaggatccgcaaacagagatgcagga
gctgctgagatcgtctccatgactctgacggagctgtcggtctttatgaagaagcaggag
ctggagcttcagctgagaacagagaaggagagggaagaggctgccatcactgaggagctg
ctgaagatcaccgaggagaagcaggagctgtcgggcctgaggggcttcgactctcccttc
taccacaccactgagactctgactggctgtcaggcacaagacaagaccctcgccaacgcc
cagcccggagaccccgtcacccaccctgttgaatcgacgccagacaaaggggagaacacc
agcggggccgggagcgaaagagaaggacgcggagcgggggacagcaggagttcagccctc
gatcagtcctggtccttccagtcaggattcacccccatcgaccaccacctgcaccggagc
ccttcagctccagacgacgaggtgggcaagtttgggatgttctccccgagcccctgcagc
aagaccccgggggccataatgccctacgagtcgttctttgacctggctctgcccagggcc
gtctcgctcttcgtgggccagaagacgtcggaggcggtgcacaaggcggcgctggagagg
ctgctgcagcagcaggaggagggcctggaggacggggaggaggagggggtagtgaccgct
tcgccactggaggtgctggatcgccttgttcagcaggggagcgacacccatgataaagtt
ctcaagagattacctttgccaagttctgccccgctggacgagctccacacgctgcgcagc
cagctgctgctgctgcacaaccagctgctgtacgagcgctacaagagggagcagcacgcc
gtgcgcaaccgccgcctcctccgccgcatcatcaacgccaccgcgctggaggagcagaac
aacgccatgaaggaccagctgaacctgcagagcgtggacatcgtgtctctgagggagagt
ctgcaggtggagcagcagcgctacaggcagctgtgggacgaccgggagacggtggtgacg
cgactgcacagtcagatcagacagctgcagcagggccgggacgactactacaccaagaac
caggagctgcagagtaaattgcaagagggtcagaaaaggatagatgatctggaggcggag
cttcagagggccaacaacaaagtctgccacactggtcaccttctcaaccagatgactatc
aagctgagcaacagcgagagcacccagcagcagatgagcttcctgaacaagcagctgctg
ctcctcggggaggcgcacaagctgtccatgcaggacctgcagcacggaggcaccgataac
accaaggagacccagatgcggaaggtgtcttacgggaacgaggtggagaccctgaagcaa
agcctgctggtccagggtcagaaactggaggcggcccagcagagagtcgccgagctggag
acgcacctctccaagaaggaacacctcatcgccgagcagaagaagttcctggaggatgtg
aagtgtcaagcaaaggcggagctgcaggcctccgacagcaggtatcaggcgcagaggagg
atcactcagactctgcagactgaactcctgcagctctacagcagggtggagatggaggct
cctgtcagcaccgtcagcagtccaccaccagggggcagagctgacccacagacttgtgct
gactccagtgtcacggtgccaggtggacgaagcaaacctcacaccatcgaggagttggta
gacggtagaccgccccgagactcctcccggggcaacagcagcactttatcgccacggcaa
ccaaaggtgagcaactcttccaagacggcggcggcggccaactccatgaacggcagccag
gacccggcccccccgcccctgttggtggagtcctccctgacctgtccctacggcaacccg
ctcactctcctgcccccctgcgacgcaccgataaccgtgggctcctaccccagcgccaag
agcttcctgggcatgagggcccgcgagctgttccgcaacaagagcgagagccagtgcgac
acggagcaaccggcgacgcgtttgtctggtcttgcccacggcctgaagacggatatgtgc
gtggagccgtcctgcccaggttacggtgcccccattggtcctgtaccttcctccactcca
accccaacccctgccacccctctcactgtgcccaccccctctgagcccaagcagcgggcc
accagccaggaaagtccccgcaggaaggcagcgtcagcctcaggtggagggagggatcag
gcggggtcagggcgcccccggcagcagcagctaaagatcatggactacaacgaaacacac
cacgagcacagctag
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