Pseudochaenichthys georgianus (South Georgia icefish): 117455983
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Entry
117455983 CDS
T09629
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117455983
Cilium and associated proteins [BR:
pgeo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117455983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
Rapsyn_N
RPN7
TPR_NPHP3
TPR_11
TPR_14
TPR_6
TPR_9
TPR_19
Motif
Other DBs
NCBI-GeneID:
117455983
NCBI-ProteinID:
XP_033951551
LinkDB
All DBs
Position
12:complement(20549933..20690799)
Genome browser
AA seq
2583 aa
AA seq
DB search
MVCFPVLLHWDESLSLPDLAESRMEKQRTKKEKFSLFGSRSTSRTTNPPSSSSSSSSPVI
PSASPVKRDRLPVPLVPPISPGLSKAEFLDRVRRSNQACQQGEYALAVQLYSEALTADPQ
NCILFSNRSAAYLRLGEYSTALDDAIKARLINPKWPKAYFRQGVALQYLGRHADALAAFS
SGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQKMKLDKSPFVVVSVIGQELLTHS
FHGASVVVLEAGLKIGTCSLKLRGSVFSALSSAYWSLGNVEKSVAYMQQDLEVTKTLGDQ
SGECRAHGNLGSALFSKGSYREALANHRNQLVLAMKLKDREAASDALSSLGHVYTAIGDY
PNALASHKQCVLLARQTQCQLSEARQLGNMGAVYTALGDFTNAVQCHEQHLDIAKTMENR
REEARSYSNLGSAYHSQRDFDKAISYHTRVLQLAQELGDRAIEMRAFAGLGHAARCMQDL
ERARQHHQHQLEIAQELQDRAAQGRASSNLGIIHQMKGEYDTALKLHKAHLSFAQELSDY
AAQGRAYGNMGNAHHALGIHDQAVRFHRQELQISLEVNDRPSQASTHGNLAVAYQALGAH
DRALQHYLHHLTIARELQDTQSEARALANLGNFHSCRGEYAQALPYYQQYLALAPGLQDL
EGEGKVCHNLGYAHYCLGQYRDSVRYYEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEY
KKAEECQRYLLSLAQALDNTKAVFRAYGNLGDVCVCRGDLPGAVRFHQQQLSLAQKVNDQ
KMEADAYSALGSVHRMLRQLDTALSFHSQELTVRKDLGDQQGECKALGHLAAVHMALGDY
ATTFQCYEAQLGLAQGLRDARLEAQVHGNMGITKMNMGVFEEAIGYFEQQLAMLQQLSGT
ESMLDRGRAYGNLADCYDALGDYEEAIQYYEKYLTVAQSLNHVQDQGKAYRGLGNAHRSM
GSLQQALVCFEKRLVVAHELGGEGGGKAQAYGELGTLHSQLGNYEQSLSCLEHQLNIART
AGDKSLEAEASDALGGVYQRMADNETALQWHQRALEIAEQTGCVRSQGRSYGNLGLTYEA
LGKYERAVVFQEQHLSVAAQTNDLIAKTLAYGSLGRTHHALQNYAQAVMYLQEGLRLAEQ
LGRREDEAKIRHRLGLSLWAGGNLEEAQHQLYRASVLFETIRHETQHNTDYKLSLFDLQT
SSYQALQRVLVSLGRHDEALAIAERGRTRAFADLLVERQKGSQQMASTDPYIPVTVEHIL
ETVNGQRAMVLYYSLAGGFLYSWLIAPGTGIVKFNEVYLGEAGVEDFQDGGGSPQSGGGG
GGGGPQSLEQYICNAREALGVDSHYSRACSSSETESEAGDLLEQQFEELNNKLTSATDPT
GYLRMVSRNNIFNRSCQSMTSLYSATVSPVKDSLHSPPYRPSTISKPPLRALYDLLIAPM
EGGLMHSSGPVGRHKQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLISVPSLGSLGTT
IKPHPRRGGPSLCSDGGSVAAVIGAPRLPASVMDRWLWGPLPSAQDEALWLGEQMGCHPL
TGANATKERVLAALSQAECVHFATHISWKLAALVLSPSQEHAGGEGAGGRPREKSPCTGS
TSGETAGQEGKIKGLFPERLRGADETSEDGESLCDMESVCDGPSLHDFLLTAADILDLCL
NVKLVVLRLYPESSSKVTSDGLVGLTRAFLAAGVQCVCVSLWPVPIAASKVFTHTFYTAL
LNGTKASAALTEAMKTLQSSKHFSHPSNWAGYMLIGTDVKLNSPMSLVAQALAEILQYPE
RARDALRVLLHLIEKSLQRIQSGQCNPMYTSQQSVENKVGGVPGWQALLSAVGFRLDFSG
NCSGLPAAVFFPTSDPGDRLQQCSATLQSLLGLTPPALQALCKLVTVSEAGEQLIHKAVK
SMVGTLHQVLVQLQSGDKEQDFSLAPIQVSISVQLWRLPGCHEFMAALGFDLCEVGQEEV
VLKTGKQASRRIMHFALQSLLALFDSTELPKRLSMDSSSSLESLSSSQSASQPHSLPLSF
GCYPPQPSFLPPVCPDNLSCDAISVYSLSSLASSLSFLSRPEPAGSDIISQRSHQQDLDR
HRGGGGHYASKRHTGGMSRGRMTNQGGGTSGEGEEEEYEGYSIISSEPLGRGRRECDTLP
LPAGHRNSRGGAGRGTAGGHGYPLTISSKGSISSPTSPIKAPQLPLKVLTSSKSKQEISP
PQRTAKAKVSSSESDQSSTETDSTIKSQEERMGPAGQLDPQELAQKILEETQVHMQAVES
LQKANIRGKTLRGPEGGEEAHARQHSMSTPTTPTLTGATRGFQPSETSAFSRPPSRAGLK
ACSSPLSPSGQFSPLSASVSTPSPTRPKPPSRSSSLQKISSGYNSPAHSSPTLSLSVKEQ
GSPFHTNSPDVQLKLKYPTSPYTTHISPSHSPAGSATSPALSYSSTGSVSASSSPANTPE
PNQPKRDHKVQAIHNLKTFWANAGQKQEGPCPASLLRGGNKKMSTVQKDVLGLLNLSPRH
ESVSKNLEGSEDHNTGESPNGHQKLEAKPPPPPSANSKGSIKIPSGNGYKFLSPGHFFPS
SKC
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgttttcctgtcctgcttcactgggatgaaagtttgtcgctgccggatttagcc
gagagcaggatggaaaagcaaagaacgaagaaagagaagttctctctgtttggttctcgc
tccaccagcaggaccaccaaccctccctcttcctcctcctcctcttcctctcctgtcatt
ccttcagcctcgccggtgaaaagagaccgactgcccgtccccctcgttcctcctatttct
cctggcctcagtaaagcagagttcctggaccgtgtgcggcgcagtaaccaggcctgccag
cagggagaatatgctctggctgtgcagctctacagcgaggccctcaccgcggacccccag
aactgcatcctgttcagcaaccgctccgctgcctacctcagactgggagagtacagcacc
gctctggatgacgccatcaaagctcgtcttatcaaccccaaatggccaaaggcctacttt
cgtcagggggttgccctgcagtacctgggtcgtcatgccgacgccctggcagcgttctcc
tccggcctcgcccaggaccccaagagtctccagctgctcgtcggcatggtggaggccgcc
atgaaatcacccctcagagactccctggagccgacctaccagcagctgcagaagatgaag
ctggacaagagcccgttcgtggtggtgtccgtcattggtcaggagctgctgacccacagt
ttccatggcgcctccgtggtggtgctggaggccgggctgaagatcggcacgtgctcgctg
aagctgcgggggtctgtcttctcggccctcagctcggcatactggtctctaggtaacgtg
gagaagagtgtggcctacatgcagcaggacctggaggtcaccaagactttaggtgaccag
tcaggggagtgtcgtgctcacgggaacctcggctctgcgctcttctccaaaggcagctac
agagaagcgttggccaatcacaggaaccagttagtgctggccatgaagctcaaggacaga
gaggctgcatccgatgctctcagcagtctgggccatgtgtacacagccatcggtgactac
cccaacgcgctggcgagccataagcagtgtgtgctgttggcgagacaaacgcagtgccag
ctctccgaggctcgccagctgggcaacatgggcgccgtgtacaccgcgcttggagacttc
accaatgccgttcagtgccacgagcagcacttggacatcgcaaagactatggagaaccgg
cgtgaggaggctcggtcctacagcaacttgggcagcgcctaccactctcagcgtgacttc
gacaaggccatttcataccacacacgcgtgctgcagctggcacaggagctgggcgacaga
gccatcgagatgagggcgtttgctggcctggggcacgctgccaggtgcatgcaggactta
gagagagctcgtcagcaccaccaacaccagctggaaatcgcacaggagctgcaggacaga
gctgctcagggccgagcgtcatctaacctgggcatcatccaccagatgaagggggagtat
gacacagccctgaagctccacaaagcccacctgtccttcgcccaggagctgagtgattac
gctgcccaggggagggcatacggtaacatgggtaatgcccatcacgcactgggcatccac
gaccaagctgtccggttccaccgtcaggagctgcagatctcactggaggtgaatgaccgc
ccgtcccaggcctccacacacgggaacctggctgtagcctatcaggcgctaggggctcac
gaccgggctctgcagcactaccttcaccacctgaccatcgctcgagagctgcaggacact
cagagcgaagcacgagcactagcaaacctgggtaacttccatagctgcagaggggagtac
gctcaggctttgccgtactaccagcagtacctggctctggctccaggcctgcaggacctg
gagggagaaggcaaggtgtgccacaacctcggctacgctcactactgcctcggacaatac
agagactctgtcaggtattatgagcaggacctggccttggctaaggacctccaagacaaa
ttagcccaggctaaagcctactgtaacctgggcctggcccacaaagcactgggggagtac
aagaaggcagaggagtgtcagagatacctgctctctcttgctcaagccttggataacact
aaggcggttttcagggcctatgggaacctgggagatgtgtgtgtgtgtcggggtgatctc
ccaggagctgtgaggtttcaccagcagcagctcagtctggctcagaaggtcaacgatcag
aagatggaggctgacgcttactctgcacttggatcagttcacaggatgctccgccagctc
gatacagccctgtccttccacagccaggagctgaccgtgcgtaaggatctgggtgatcag
cagggggagtgcaaagccctgggccacctggccgcggttcacatggccctgggagactat
gcgacaaccttccagtgttatgaggcccagctcggcctggcgcagggtctcagggacgcc
cgtctggaggcccaggttcatgggaacatgggcatcaccaaaatgaacatgggggtgttt
gaggaagctattggatattttgagcagcagctggccatgctgcagcaactgagtggcact
gagagcatgctggacagaggcagggcgtatgggaacctggcagactgctatgacgctctg
ggagactacgaggaggcgattcagtactatgagaaatacctgactgtggctcagagtctc
aaccatgttcaggaccaggggaaagcctacagaggactgggcaatgcacacaggtccatg
ggtagtctccagcaagcactggtgtgctttgagaaacggctggtggtagcacatgagctg
gggggggaaggagggggcaaggctcaggcctacggggagctgggcaccttacacagccag
ctgggcaactacgagcagtccctctcctgcctggaacaccagctgaacatcgcacgcaca
gcgggggataaatccctggaagcagaggcaagtgatgctcttggaggtgtttatcagcgg
atggcagacaacgagacagcgctacagtggcaccagagagctttggaaatagcggagcag
acgggctgtgtgaggagccagggtcgatcctacgggaacctgggactgacctacgaagct
ttagggaagtatgagcgggccgtggtcttccaggagcagcacctgagtgtggcggcacaa
accaacgatctgatcgccaaaactctcgcctacgggagcctggggaggacacaccatgca
ctgcaaaactatgcacaggctgtgatgtacctgcaggaaggtctgcgcctggcagagcag
ttagggcggagagaagatgaagctaagatacgacatcgcctcggcctgtctctgtgggca
ggaggcaacctggaggaggcacagcaccagttgtacagagcgtccgtattattcgagaca
attcgtcatgagacgcagcacaacacggattacaagctctctctgtttgatcttcaaacc
agctcgtaccaggctctccagagagtcctcgtcagcctaggccgtcacgatgaggccttg
gccatcgcagaacgagggcgaacgcgagccttcgccgatctcctggttgaacgccagaaa
gggagccagcaaatggcaagcactgacccttacatcccagttactgtggagcacatcctg
gagacggtcaacggtcagagggccatggtgctctactactctctggctggaggctttctg
tatagctggctgatagctccagggacaggtattgtgaagtttaacgaggtgtatctcgga
gaggccggagtggaggatttccaggatggtggtgggagcccgcaaagtggaggaggaggg
gggggtggaggtcctcagtccctggagcaatacatctgcaacgctagagaggctctagga
gtggacagccattacagcagagcttgctccagcagtgagactgaaagtgaagccggagat
cttttagagcaacagtttgaagagctgaacaacaaattgacgtcagccaccgacccaaca
ggctacctccgcatggtgtccagaaataacatctttaacagaagctgtcagagcatgacg
agtctgtacagcgccacagtatctccagtgaaggacagcttacactctcctccttaccgg
ccgagtaccatcagcaaacctcctctacgagccctttatgatttacttatagctccaatg
gaagggggcctgatgcacagcagtggtcctgtgggccgacacaaacagctcgtgttagtt
ctggagggagaactgtacctgatcccatttgccttgctcaaaggcagctcttctaatgag
tacctttatgaaaggttcagtctcatttctgtaccttctttaggcagcctgggaaccaca
atcaagcctcatcctcgtcgcggtggtccctccctttgctcagatggaggttcagtggct
gctgtgattggggctcctcgcctgcccgcctccgtgatggaccgctggttgtggggtccc
ttaccatcagcccaagatgaggctctttggctgggggagcagatgggatgtcatccccta
actggagccaatgccacaaaggagcgtgtgcttgccgctctcagtcaggccgagtgtgtt
cactttgcgactcatatctcttggaagctcgctgctttggttctctctccgagccaggag
catgctgggggagagggggcgggcgggcgacccagggagaagtccccgtgtacggggtca
acctctggtgagactgcgggtcaggagggaaagatcaagggtttgtttccggagagactc
aggggagcagatgaaacgagcgaggacggggagagtttgtgtgacatggagagtgtgtgt
gacggtccatctcttcatgacttcctcctcacggctgctgatatactggatctgtgcttg
aacgtcaaactggtggttctgaggttgtacccggagtccagcagcaaggtgacgtctgac
gggctggtgggtctgacccgggccttcctggctgccggcgtccagtgtgtgtgtgtctct
ctgtggcctgtaccgatagctgcctccaaggtcttcacacacaccttctacacagcgctt
ctcaacgggaccaaagccagcgcagctctgacggaggccatgaagactctgcagagcagc
aaacacttctcacacccctccaactgggctggctacatgctgattggcactgatgtgaag
ctgaacagccccatgtcgctggtggctcaggccctggcagagatcctgcagtacccagag
agggccagggacgccctcagagtgctgctacacctgattgagaagtctttgcagcgcatt
cagagtggccagtgtaacccgatgtacacatcacaacagagcgtagagaataaggtcggg
ggggttcccgggtggcaggccctcctgtctgcggtgggtttccggctggacttctctggt
aactgttccggtctgcctgcggcggttttcttccccacctcagaccccggggatcggctg
caacagtgcagcgccactctacagtccctgctcggtctcactcctccagctctgcaggct
ctctgtaaactggtcacagtatctgaggccggagagcagctcattcataaggcggtaaaa
agcatggtgggcacgcttcaccaggtgctggttcagttgcagtcgggcgacaaagagcaa
gacttctctctggctcccattcaggtgtccatcagtgtgcagctctggaggcttccaggc
tgccacgagttcatggctgcactcggttttgatctctgtgaggtgggtcaggaggaggtc
gtgctgaagactggaaagcaggccagcaggcgcatcatgcactttgcccttcagtctctt
ctggcacttttcgactccacggagcttcccaagcgactgagcatggacagctcctcctcc
ctggagtctctgtcgtcctcccagtcggcctcccagcctcactccttacccctctccttt
gggtgttaccccccccagccgtccttcttaccccccgtctgccccgacaacctctcctgc
gacgccatctccgtctacagcctcagctccctcgcctcctccctcagcttcctgtcgcga
cctgagcccgcaggaagtgacatcatcagccagcgctcacatcagcaagatctggacaga
catcgcggaggaggaggccactacgcctcaaaacgccacacaggaggcatgtcgagagga
agaatgaccaatcagggaggaggaacgtcaggagaaggggaggaagaggagtacgagggt
tactccattattagcagtgagcctttaggacgagggaggagagaatgtgacacgctgcca
cttcctgccggacacagaaacagcagaggtggtgctgggagagggacagccgggggtcat
gggtaccctcttactatttcctccaagggaagcatcagctcacctacatctcccattaaa
gctccacagctgcccctcaaagttcttaccagctccaagtccaagcaggaaatctctcct
cctcagaggacagcgaaagcaaaggtcagcagctctgagtcggaccagtcgagtactgag
accgacagcacgatcaagtcccaggaggagaggatggggcccgcaggacagctggacccc
caggaactggcccagaagatcctggaggagacacaggtccacatgcaggctgtggagagc
ctgcagaaagcaaacattagggggaaaacactgagggggcctgaggggggagaagaggcg
catgccaggcagcattcaatgtcgactcccacaactccaactctgactggagcgacacga
ggcttccagccctctgagaccagtgcgtttagcagaccgcccagtagagcaggtctaaag
gcttgctcctcccctctttccccctctggtcagttctcacccctctccgcttctgtttct
acaccttccccaactcgaccaaaaccgccgtcccgctcctcatcgctgcagaaaatcagc
tccggctacaacagcccggctcattcctctcccactttatctctctctgtgaaagaacaa
gggtcgcctttccacaccaattccccagatgtgcagctcaaactgaaatacccgacctca
ccttacaccactcacatctccccttcccactctcctgctggcagtgccacatcgccggcc
ctttcttattcctccacaggatccgtttcagcctcctccagccctgcaaacacccccgaa
cccaaccagccaaagcgggaccataaagtccaagcaattcataacttaaaaacgttctgg
gccaacgctggccagaaacaagaggggccctgccctgccagtttactccgaggggggaat
aaaaaaatgagtacagttcagaaagatgttttgggtttgcttaatctctcacctagacac
gagtctgtcagcaaaaatctagaaggatctgaggatcataacactggcgagagtccaaat
ggtcaccaaaaactggaggctaaaccccctccacctccatcggctaactctaaaggaagc
atcaaaattccctcggggaacggctacaagtttctctcacctggacatttttttccatcc
tctaaatgttga
DBGET
integrated database retrieval system
