Pseudochaenichthys georgianus (South Georgia icefish): 117456010
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Entry
117456010 CDS
T09629
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117456010 (ric1)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117456010 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117456010
NCBI-ProteinID:
XP_033951603
LinkDB
All DBs
Position
12:16882715..16919035
Genome browser
AA seq
1441 aa
AA seq
DB search
MYFLTGWPRRLLCPLRSEEEPFHVQPSSQRFYFAVLSETQLSIWFSRPSVLIVSYIESAK
AATQFGFYQKAEWKPDDSMIAVATANGYILLFDVLGGGGDKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHVLHWDGLGSNGRKAIC
LTTIPFSLDLQSARGGPSPDLEGVYIRCMEYCVTLDGFAVVLSDGRLGFITPLTNTITAD
QLQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYTIDTATGSMQLSHKLELTPKHYP
DIYNKTGAVKLICWSPDYSVTMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKEPI
KISSMSWGAEGYHLWVIPIKQEKKKEQEVEEMETPPHPTLQAGILQFHFIKSALTVNPCT
SNQEQVLLHGEDRLYLTCGDPSQVNNPSDTHPHTHVHPHDGSPLHHPPNPDSSLSQGLST
LLGHKHWHVVQIHSTYLESNWPIRFAAIDTAGQCMAVAGRRGFAHYSLFTRKWKLFGNIT
QEQNMTVTGGLAWWKDFVVVACYNYIDQQEQLRLYQRSANLDNAFASVTKLQSDTLLLNV
FRDMVILFRADCSICLYSLERRNDSPHPTASVELLQEVSMSRYIPHPALVVSVTLTSVRT
ETGITLKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVREKETPANSKKLLQFCPPVVLA
QCVENVWTTCRSNRKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHI
NIYPLAVLFEDALVLGASNETVLYDGLQGPSEPLEALFPYCTVERTSQIYLHHILRQLLV
RNLGEQALMLAQSCASLPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLF
LQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQ
HATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMDTPPPTPTTQEPSSSSGGFEFFRNRSI
SLSQSADAIATGKFNLQKTFSMPSGPSAKGREVDCAENMYIDLMLWRHARHLLEQVRLRD
LGCFSAQLSFELIGWLCRERNRVARVEDFVSALKRLHKDFLWPFPVIPVGSISSPLKNGR
CRPALSTRLLKSQSADSLLNSDMDTEPLQVDNTSHSWLDRLEDRAKDMDTASSAHSNQHS
PQTHDAILSLLTNKVEEYSVGSATDLTETSSVVDGDWMMVDENSSTLSLSQAELEHISME
LANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDANVIKQVICFLDSPEVPQETVQ
SIRNGLLAVDSWVSTNCLGYKPFLSLIQPQLQDLMEAAVEAVQPEAFQPTSQSSKLGGSE
GPGGAAAPRAEDIRGVAAPLGLALPSLEPPGGFPRPPSADCPPEQTEEQGKEEGAYDCTL
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaaccggctggccacggaggctgctttgtccgctgaggagtgaagaggag
ccgttccacgtccagcccagttcccagaggttttacttcgccgtgctgtcagagacccag
ctcagcatctggtttagtcggcccagtgttttgatagtcagctatatcgagtctgcaaag
gcggctacccagtttggcttctaccagaaagcagaatggaaaccagacgactccatgata
gctgtggcgactgccaacggctacatcctcctgtttgatgtgctgggtggggggggggac
aagtacctctatgagcctgtctatccaaaagggagtcctcgtgtgaaggtgactccgggc
tataaggaggaacagtgtgcccctgctttgtctctagagatgaagaagcctgtggatctg
gaggcccccatcaccagtctgcagtccctccaggaggacttgctggtgtgcactgcagac
ggatacctgcatgtgctgcactgggatgggctcggcagcaacggacgcaaagccatctgc
ctcacgacaatccccttctcactagacctgcagtctgctcgaggtggtccctctcctgac
ctggagggagtgtatatccgttgtatggagtattgtgtgacgctggacggcttcgctgtg
gtgctgagtgacggacgcctgggcttcatcacgccgctcaccaacaccatcaccgcagat
cagctgcagggcgtctgggcagcagatgtgactgacggtacctgcgtggctgtcaacaac
aagtacagactgatggcctttggctgtgccagcggctcagtgctggtgtacacgatagac
actgcgacaggatcaatgcagctctcacacaaactggagctcacccccaaacactaccca
gacatttataacaagacgggtgcagtcaagctgatctgctggtcacctgactacagtgtt
accatggttacatgggagtgtggcggcctatcgctgtggagtgtcttcggagctcacctt
atctgcactctgggcgaggactttgcgtatcgttctgatggtaccaagaaggaaccaatt
aaaatcagctctatgagctggggcgcggagggctaccacctttgggtgatccctatcaag
caggagaagaagaaggagcaggaggtggaggagatggagaccccccctcaccccaccctg
caggccggcatactgcagttccacttcatcaaaagtgccctcacagtcaacccgtgcacg
agtaaccaggagcaggtgctgctgcacggggaggaccgcctctacctgacttgtggtgat
ccgtcgcaggtcaacaacccctctgacacacatccacacacacacgtacacccgcacgac
ggcagcccgctgcaccacccccccaacccagactcctctctctctcagggactcagcact
ttactgggacacaagcactggcacgtggtccagattcacagcacatacctagagagcaac
tggcctataaggtttgcagccatagacacagcaggccagtgcatggctgtagcagggagg
cggggctttgcacactactccttattcaccagaaaatggaagctgtttggaaacatcact
caggagcagaacatgacggtgacaggagggctggcttggtggaaggactttgtggtggtg
gcctgttacaattatatagaccagcaagagcagttgaggctctatcagcgctcggcaaac
ctggacaacgcctttgcatccgtcactaagctgcagtcagacactctgctgctgaacgtc
ttcagagacatggtcatcctgttcagagccgactgctccatctgcctctacagcctggag
cggaggaacgacagtccacacccgacagccagtgtggagttgttgcaggaggtgtcgatg
tctcgctacatccctcaccccgccctggtggtctctgtcacactcacctctgtgcgcaca
gagaccggcatcacattgaaagccccgcagcaggcctgcatggcagagagcatcatgttg
aacctggctggccagctgattatgctgcagagggaccgctcagggccgcaggtacgggag
aaggagacgcctgccaactccaagaagctgctacaattttgtcctcccgtggtgctggcc
cagtgtgtggagaacgtgtggaccacctgtcgctccaacaggaagaagcgccacctgctg
gaggccctgtggttgtcctgcggcgaggcgggcatgaaggtgtggctgcctctgtttccc
cgagaccaccgcaagccccactccttcctctccagacgcatcatgctgcccttccacatc
aacatctaccctctggccgtgctgttcgaggacgccctggtgctgggggcctccaacgag
acggtgctctacgacgggctgcagggcccctctgagccgctggaggcgctgttcccctac
tgcaccgtggagaggacgtcccagatctacctccaccacatcctgaggcagctgctggtg
cgcaacctgggtgaacaggctttgatgctggctcagtcctgtgcctccctgccctacttc
ccccacgtcatggaactgatggtgcacgtggtgctggaggaagaggccacgtcgcgggag
cccatccccgaccctctgctgcccaccgtggccaagttcatcaccgagttccccctcttc
ctccagaccatcgtccactgtgccaggaagacggagtacgccctgtggaactacctgttt
gccgccgtgggaaaccccaaagatctgtttgaggagtgtctcatggcccaagacctggac
acagcagcctcctatctgattatactgcagaacatggaggttccagcagtgagcagacaa
cacgccactttactcttcaacacggcactcgagcagggcaagtgggacctctgccggcac
atgatccgattcctcaaagccatcggatctggggagatggatactcctcccccaacaccc
accactcaggaacccagcagctcaagtggcggttttgagttcttcagaaatcgcagcatc
agtttgtcgcagtcagcggacgccatcgctacggggaagttcaacctgcagaagaccttc
agtatgccctcgggaccctcggctaaaggtcgggaggtggactgtgcggagaacatgtac
atcgacctgatgctgtggcgtcacgcccgccacctcctggagcaggtccgcctccgagac
ctgggatgcttctccgcacagctgagcttcgaactcatcggctggttgtgtcgggaacgg
aaccgcgtggcccgggtcgaggactttgtgtctgcgttgaagcgactccataaggacttc
ctctggcccttccctgttatccccgtgggaagcatcagctcgcctctgaagaacggacgc
tgtcgcccagcgctgagcactcggctgttgaagtctcagtcggctgacagtctgctgaac
agcgacatggacacggagccccttcaggtggacaacaccagccacagctggctggacagg
ctggaggacagagccaaggacatggacacagcctcctccgcccactccaaccaacactcc
ccacagacacacgacgccatcctgtctctgctcaccaacaaagtggaggagtacagcgtg
ggctcggccacagacctgacggagaccagctcggtggtggatggtgattggatgatggtt
gatgagaactcgtccactctgagtctcagtcaggccgagttggagcacatctccatggag
ctggctaacaaaggcccgcacaagtcacaggtgcagctcaggtatctccttcatgtgttt
atggaggcgggctgtctggagtggtgtgtggtgattggtttgatcctgcgggatgccaac
gtcataaagcaggtgatctgcttcctggacagccccgaggtcccccaggaaactgtgcag
agcatccggaacggcctattggctgtcgactcgtgggtgtccactaactgcttgggctac
aagcccttcctgagcctgatccagccccagctgcaggacctgatggaggcggcggtggag
gcggtgcagcccgaggccttccagcccaccagccagagctccaagctgggcggctccgag
ggtccgggaggggccgcggcgccccgggcggaggacatccgaggagtagcggctcctctg
ggcctcgccctgccctccctggaacccccgggagggttcccccgtcccccctctgcggac
tgtccccccgagcagacggaggagcaggggaaggaggagggggcctacgactgcaccctg
tcatga
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