Pseudochaenichthys georgianus (South Georgia icefish): 117456034
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Entry
117456034 CDS
T09629
Symbol
zer1
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117456034 (zer1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
117456034 (zer1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
117456034
NCBI-ProteinID:
XP_033951639
LinkDB
All DBs
Position
12:28252367..28281619
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AA seq
784 aa
AA seq
DB search
MAAKAGDNPDSLMTLATIFCLRNLRKTMCYQGFKNKLCLRSDIFLPSEICDKLVNTYMEL
VHTDSNFEPEESFFQLFSDPCSTRLTRVQLREDFVRDRDLEAIQKQDLIELHLTYCNSLS
SRSLKSLISFRETLVSLCLFGCNHIFYRKGGAPLACNEDTEDEEEESPASRQALETDFSF
QGFNRLRLLNLGGLPDEVDAETLLKPLKSLTSLDLSNVQLLGTAFLTQWKDRLASLVLYN
VDLSEELVSTIVEMVHLRHLDISRESRRTSKFKMSRKILTAIVQRLVNLVSLDVSGHIML
DNCTVPHIEEAMGRPSIELCKSSIYPFQELKRPLQFLGLYDTTLCNVTHIPAYKVTGSKN
EEQVLNAIEAYTEFRPELAHRAINQLFDIARIQHCSQLLRALQLVIAALKCHKYDKSIQV
TGSAALFYLTNTEYRSDQSVRLRREVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELE
FQYSRVNQLLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQ
KKLQDRTCDQVMEFSWSALWNITDETPDNCQMFLNCRGMSLFLECLQEFPDKQELHRNML
GLLGNVAEVKALRPQLLTPQFITVFSNLLDSKADGIEVSYNACGVLSHIMFDGPDVWSME
DPRRDSVMDKMMDAIQSWDVSSRRNINYRSFEPILRLLPQSIAPVSQHWATWALYNLVSV
YPSKYCPLLIKEGGISLLEKVLELESSHPETKDMASKVMEACETFKEDPMETNNGQEVNF
GQRG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagcaggagacaaccctgacagcctcatgactctggcaaccatcttctgc
ctgaggaaccttaggaagaccatgtgctaccagggattcaagaacaagctctgtctgcgc
tcggacatcttccttccaagcgagatctgcgacaagttggtcaacacatacatggagttg
gtccacacagatagtaactttgaaccagaggaaagcttcttccagctgttctcagacccc
tgcagcaccaggctgaccagggtacagctgagagaagacttcgtacgggacagagatctg
gaggccattcaaaaacaggacctgattgagctccacctcacctactgcaacagcctgtcc
tcccgcagcctgaaatccctgatcagcttccgtgagaccttggtgtctctgtgtctcttc
ggctgcaaccacatcttctacaggaagggcggtgccccactcgcatgcaacgaagacact
gaggatgaggaggaggagagccctgcttccaggcaagctttagagacagactttagcttc
cagggcttcaaccgcctcaggctgctgaacctaggcggcctgccggacgaggtggatgcg
gagacgctgctcaaacccctgaagtcgctcacctcgctcgacctgtctaatgtacagttg
ctgggaacagcgtttctcacgcagtggaaagacagactcgcgtctcttgtgctctacaac
gttgacctgtcagaggagctggtcagcaccattgtggagatggtccatctcaggcacctt
gacatctcccgggagagcaggcgcacctctaagtttaagatgagcaggaagatcctgacg
gccatcgtacagcgcctggtcaacctggtgtctctggacgtctccgggcacataatgctc
gacaactgcacggtcccacacatcgaggaagctatggggcggccgagcatcgagctgtgc
aagagcagcatctaccctttccaggagctgaagaggccgctgcagttcctgggcctgtac
gacaccaccctctgtaacgtgacacacatccctgcttataaggtgaccggatcaaagaat
gaagagcaggttctgaatgccatcgaggcgtacacagagtttcgccctgagctggcccac
agagccatcaatcagctgttcgacatcgccaggatacagcactgcagccagctgctccga
gctctgcagctggtcatagcagcgttgaagtgccacaaatacgataagagcatccaggtg
acgggcagcgccgctctgttctacctgaccaacacggagtaccgcagtgaccagagtgtg
aggctgcgcagagaggtcatccaggtggtgctgaacggaatggagcaataccaggaggtc
accgtccagaggaactgctgcctgactctgtgtaacttcagcattccagaggagctggag
ttccagtacagtcgggtcaaccagctactgctgaagatcctggagccagcccggcaggac
gagtccatccagaggatcgctgtgcacctctgcaacgctctggtctgtcaggtggacaac
caccacaaggaggctgtggggaagatgggctttgtcaagacgatgttgaatttaattcaa
aagaagctacaggacagaacgtgcgaccaggtgatggagttctcctggagcgctctgtgg
aacatcaccgatgagacgccggacaactgtcagatgttccttaactgtcggggcatgagt
ctcttcctggagtgtcttcaggagtttccagacaagcaggagctgcatcgcaacatgttg
gggcttctgggaaatgttgctgaggtgaaagcactgagaccccagctgctcaccccccag
ttcatcactgtgttcagtaacctgctggacagtaaggcggatgggatcgaggtgtcctac
aatgcctgcggcgtgctctcacacatcatgtttgacggcccggacgtttggtccatggag
gatccgcgcagagactcggtgatggacaagatgatggacgccatccagagctgggacgtc
agctcacgccgcaacatcaactacaggtcgttcgagcccatcctgcgcctgctgcctcag
agcatcgcccccgtcagtcagcactgggccacctgggccctctacaacctggtgtcagtt
tacccaagcaagtattgtcccctgctgataaaggagggaggaataagtcttctggagaaa
gttctggaactggaaagctcacatccggagaccaaggacatggccagcaaagtaatggag
gcgtgtgaaaccttcaaagaagaccccatggaaacaaataatggacaggaggtcaacttt
ggacaaagaggttga
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