Pseudochaenichthys georgianus (South Georgia icefish): 117456096
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Entry
117456096 CDS
T09629
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117456096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117456096
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117456096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
117456096
NCBI-ProteinID:
XP_033951729
LinkDB
All DBs
Position
12:17037426..17063627
Genome browser
AA seq
2757 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSNLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPALLQTLLSRNPKIFGDKRVMQQPMVQQ
FKISQNQVHGSPGSNYQQSQSPAGCFASPQSGSGAQFVPQQNSPIPSPYTPQSPADYMPY
NPPSYSQHQQTQQVRTIHDNKVSGQLSGTSSNHNARLGSDEDYIHMAHRLGNEVNDPSMR
AFQVKSPQSVCSPAGSEEAAKRSRPPLIMQSPPPDGPPGAAADVLLSSGDRKKKQKERSR
EENEHTEKNLSYDIVSSPSKQSAKLTIKLSRMKYSDLDEPEEHPPRSRVDSDRETDLMYN
NINQLSRSAQDLSHKLGAEEQANCQQIPVRPITKESGGVSGVVFDDAEMDTLTEIERIDR
ESASERERWSKEVQDKDKPLKKRKQDSYPQESGAESNEGPAVQVCNADSKLTPKKTNAAS
NGAGRPALMVSIDLQQAGRMIRQPVVVLEAQKMCDDHVLHINSKNDAIADKVVENTDKVV
ENADKVVENADKVVENRPGIIKQHTDSPRKSGSEGQPVIPKQKQESRRDSKHRHDDKKTV
SGKGHVDKQPDKQPDKQSDKQPDKQPDKQPDKQPDKQPDKLPDKLPDKLPDTPRQKHDKH
SDPRHKEEKNHNSHRSNVGQPETPKTPSKAERNSKHGEDKVKEKDRDKDNEKEKNIDKEK
DRDRDKVRERKKERNKEREKDKVRDKDRDKEKDRDKETDKDKETDRDKDKDKETDINKEK
DKERDKERDKDGVKDKERDKDGVKDKERDKDGVKDKERDKDRVKDKERERKHKMSRENCN
RPSPDGHTKPESPRVKQDGSRKSADLNGRQRKESSGPQNSQNKKERKSGEGVVTGQAGNK
QQAVEAKPSEFPAYLLGGKSTLKNFVIPKLKRDVKEKDPQLLSKLTESEPLVRLERVSLV
ESLNKGAKPLVVLNKLSIAEVKTIIKESRNSHKSKTSGKEMSSAEKTNKRNHSLISKKSK
YAESDDDEEDDKEEDEDYSENESPKKRSKKSHDKPSKSEKRAGSGEHRRSSGSHAARRGS
GGRSRELSESEEGSPTPSLSDSARKLKKKEKQKNKKAYDSKLTTEEKMDSSSYKRFLANV
DSILESLEDVDLAATDDDDGIPEELLLGKHQLSELCSDSTKLKAMRIFHKFPSDKLVKFL
NILEKNIQDSVKLTTLMNHDNDSLDEERLWRDLIMERVAKSADACLTALNIMTSPRMPKV
VYIEDVIERVLQYSKYHLQNSLYPQYDPAYRVDPHGGAVHTPKSKRGKGSSHKQKVVVML
YNKVCDIVSNMSELLEIQLLTDTTILQVSTLGITPFFVENVSDLQLCAITLVTAVFTRYE
KHRQLILEEIFTSLARLPTNKRSLRSFRLNSDSGGDVYIQMVTALVLQLIQCVVHFPEKD
GDDDHNKKVDKDVFITNSFETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVHDLLSA
VNRPEWPVAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVASRLRKDAVNSNMDQK
TIDRILKETQGSDEIQQLQKALLYYLNENIETEPSLVFARKFYIAQWFRDATTEAEKAIK
SQNDDEEVKGLHHSMEVDSTEEIMQKSESRKKFLRKVIRTSPSDFNSLRVNSDTVEYEDS
CLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARLDMQ
RGVHCRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDMLIERILDTGISVRKRVIKILR
DICLEQPDFHKVTEMCVRMIRRVNDEEGIKKLVNETFQKIWFTPTPSHDKNAMTRKILNI
TDVVSACKDSGYDWFEQLLQNLLKSEEQASYKPAKKACVQLVDNLVEHILTYEDTLADCE
DKGVTSGRLVSCITTLYLFCKIRAQLMVKHAMTMQPYLTSKSNTQNDFMVICNVAKILEL
AVPLMEQPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNYKFVWACFNRY
YGALAKLKTQHQEDPTSVTLATNKPTLLRSLFTVGALCRHFDYDQEEFKGTSKIVIKEKV
LELLLYFTTHEDEEVQIKAIIGLGFQFIMHPELMFVQDVKVLYNNTLSEDNPSVSRRIQV
LKNLQIYLQEEDSRMQVADREWKNQEKQEDLKEMGDISSGMSSSIMQIYLKQVLESFFHS
QSTVRHFALSVILLTLSQGLIHPVQCVPYLIAMGTDPEPTMKNKADQQLVEIDKKYIGFI
HMKAVAGLKMSYQVQQAINGAKSPLLRGFRPDDTDTALCAHLYSMVRGNRQHRRAFLISL
LNLFDDSSKTEVNMLLFVADNLACFPYQTQEEPLFIMHHVDITLSVSGSNLLQSFKESLR
KEPVNQEEEMKAKKKKKKKKKKKKKHHKRQLGSDEDDEEEDEEQSSSSSSSSSEEEEEVV
HRAKKPVDHDSDFEDEDAVMSRLPENSNPLLEFSSSSQGILLLLMLKQHLKNLFGLTDSK
IQKYSPTESAKVYDKAVNRKSKVHFNPGQTLLYLKSDLANTELSHETKRNIVKQYLDFKV
LMEHLDRDEEDQEGEANANARNKAITSLLKGPKPVNHNHNNHTAPVESEEEESEAEEPPV
RKPKKAVETPEDTGNLHERVKAMDIIALCCPKFKDRPQIARVIQRIKTGYSIHWMTGSYS
GSWAEVKKREGRKKVPWVDTIKESDIIYKKISFASGQKLSNKVAQTLRDLYAAKDGD
NT seq
8274 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttctcctctccctgccaccaccgctaagagtctg
ctctacaatggaaggatctccgaagaggtcagcaacctcctggtgtgccgggacgagaat
ctggtgactcagctggcccatagcctcaaccaggtctccactgaacacatagagttgaag
gacaacttggggaatgatgaacctgagggtgacatgccagcgcttctacaaactctgctg
tccaggaaccccaaaatatttggggacaaacgtgtaatgcaacagccaatggtgcaacag
tttaagatttctcaaaaccaggtgcatgggagtccaggatcaaactatcagcaatctcag
agcccagctggatgttttgcatcgccacagtctggatcaggtgctcagttcgtcccccag
cagaacagccctatacccagtccctacaccccccagagtcctgcagactacatgccgtac
aatccacccagttattcccaacaccaacagacccagcaagttcgaaccatccatgacaac
aaggtctctggtcagctgtcgggtacttcatctaatcataatgcgagactaggctcagat
gaggactacatccacatggcccacagactggggaatgaggtaaatgacccctccatgagg
gcctttcaagtgaaatccccacagtctgtgtgttcccctgctgggagtgaagaggctgca
aaaaggtccaggcctcccctcatcatgcagtctcctccccccgatgggcccccaggtgca
gcagctgacgtgctcctcagctccggggaccgcaaaaagaagcagaaggaaaggagtaga
gaagaaaatgagcacacggaaaaaaatctctcgtacgacattgtcagttctccctctaaa
cagtccgccaagcttactataaaactgtcccgcatgaagtattcagacttggatgaacct
gaagaacatcctccgaggtcacgggtcgactcagaccgtgaaactgatttgatgtataat
aacattaatcagttgtcaaggtctgcacaggacttgtcacacaagttaggcgctgaggag
caggccaactgtcagcagattcctgttcggccaatcactaaggagtccggaggcgtcagc
ggggtcgtgtttgatgacgctgagatggacacactaacggagatcgagagaatagaccgc
gagtcggccagcgagagagaaaggtggtctaaagaagttcaggataaagataagccactg
aagaaacgaaagcaagactcatatcctcaggaatccggagctgagtccaatgaagggccc
gctgtacaagtgtgcaacgctgacagcaagttgacacccaagaagacgaatgctgcgagt
aacggagccggtcggcctgctttgatggtcagtattgatctgcagcaagctggcagaatg
ataagacagcctgtcgtggtcttggaagcacagaagatgtgtgacgaccacgtactgcac
atcaattcaaagaatgatgcaatcgcagataaagttgttgaaaacacagataaagtggtt
gaaaacgcagataaagttgttgaaaacgcagataaagttgttgaaaacagacctgggatc
atcaaacagcatactgacagccccaggaagtctggctcagaggggcaacctgtaatcccc
aaacagaagcaggaaagtcgacgcgattccaaacacagacatgacgataaaaaaacagtc
agtggcaagggacatgtcgacaaacagccagacaaacagccagacaaacagtcagacaaa
cagccagacaaacagccagacaaacagccagacaaacagccagacaaacagccagacaaa
ctgccagacaaactgccagacaaactgccagacacaccgcggcagaaacatgacaagcat
tcagacccacgccacaaagaggaaaagaaccacaacagtcatcgatccaacgtcggccaa
cctgagactccaaaaaccccgagcaaggcagagcgtaactccaaacatggagaagacaaa
gtcaaggaaaaagatagggataaagataacgaaaaggaaaaaaatatagataaagaaaaa
gatagagatagggataaggttagagaacgaaaaaaagaaagaaataaagaaagagaaaag
gataaggtacgagataaagatagagataaggaaaaagacagagataaagaaactgacaaa
gataaagaaactgacagagataaagacaaagataaagaaacggacataaataaagagaaa
gataaggaaagagacaaagagagagataaggacggagttaaagacaaagagagagataag
gacggagttaaagacaaagagagagataaggacggagttaaagacaaagagagagataag
gacagagttaaagacaaagagagggaaaggaagcacaaaatgtcgagggaaaactgcaac
cgaccctctcctgacgggcatactaaacctgagagcccgagagtgaagcaggatggtagc
agaaaatctgctgatctcaatggacgacagaggaaagagagttccggccctcaaaactcc
caaaataagaaggagaggaaaagtggggagggagtcgttactggccaagctggaaacaaa
cagcaggctgtggaggccaaacccagcgaattccccgcttacctgctggggggcaagtcc
actctgaagaactttgtgatccctaaattgaaacgcgatgtgaaagagaaagacccccaa
ctcctgagcaaactgacagagagcgagcccctggtccggctggagagagtgtcattggtg
gaaagtttgaacaagggagccaaaccccttgtggtgctcaacaaactcagcatcgctgaa
gtcaaaaccatcatcaaggaaagcaggaattcacacaaatccaagacctcagggaaagaa
atgtcttctgctgagaagacaaacaagcggaatcacagtttgatcagtaagaaatccaag
tacgctgagtcggatgatgatgaagaagatgacaaagaagaagatgaagattactctgaa
aatgagtctccaaagaaaaggtctaagaaaagtcacgacaaaccatctaagtctgaaaag
agggcgggctctggagagcacaggcgaagtagcggttcccacgctgcccgtcgggggtcc
ggtggccgcagccgtgaactgagtgaatcagaagaaggcagcccgactccaagcctgagt
gattctgccagaaaattgaagaagaaggagaaacagaaaaacaagaaggcgtatgattcc
aagctgacaacagaggaaaagatggactcctcctcatataagagattcctggccaatgtg
gacagcattcttgagagcctcgaggatgtggacctcgctgctacagatgatgatgatggc
atacctgaagagctgttgctcggaaagcaccagttgagtgagctctgcagtgattccact
aagctcaaagctatgcgcatctttcacaagtttccgtctgataaactggtgaaatttctg
aatatcctggagaagaacattcaggacagcgtcaaacttaccacgttaatgaaccatgat
aatgattcattggacgaggagcggttgtggcgtgacctcatcatggagcgggtggctaag
tctgctgatgcctgtctgactgctctcaacatcatgacatctccacgcatgcccaaggtt
gtttacatagaggacgtgattgagagggtgctgcagtactccaagtaccatctgcaaaat
tctctgtaccctcagtatgaccccgcctacagagtggacccccatggaggtgctgtgcac
actccaaagtccaaaagaggaaagggttccagccacaaacagaaggtggtggtcatgctc
tacaacaaagtgtgtgatattgtcagcaacatgtcagagctgctggagatccagctgctc
actgacaccaccattctccaggtgtcgactctgggtataacacctttctttgtggagaat
gtcagtgatctgcagttatgtgccatcacactagtgacagcagtgttcactcgctacgag
aagcacaggcagctaattcttgaggagatattcacctccctggctagactgccaacgaat
aaacgcagcctcaggagctttaggctaaacagtgattcaggaggagatgtgtatatccag
atggtcactgcactggttcttcagctcatccagtgtgtggttcactttccagagaaggac
ggagatgatgatcataataagaaggtggataaagatgtcttcatcacaaactcttttgaa
actgccatgcggacagctcagaacttcctatcagtttttctcaagaagtgtggcagtaag
cagggagaggaggactacaggcctttgtttgagaactttgttcatgacctgctgtctgca
gtcaacaggcctgagtggcctgtagctgaactgctgctcagcttactgggccggctgctg
gtgcaccagttcagcaacaagcagacagaaatggcgctcagggtggcgtcgctcgactac
ctcggcaccgtggcatctcgcctgcgtaaagatgctgtcaatagcaacatggaccaaaag
actattgaccgcatcctcaaagagactcaaggcagtgatgagatccagcaactccagaag
gccttgctgtactaccttaatgaaaacattgagacagaaccctctcttgtgtttgccagg
aagttttatattgcccagtggttcagggacgctacgactgaggcagagaaagcgataaag
tctcaaaatgacgatgaggaagtgaaaggccttcatcattccatggaagttgactcaact
gaggagattatgcagaaatccgagtcacgaaagaaattcctccgcaaagtcatcaggaca
tcaccgtcagatttcaactctctgagggtaaactctgacacggtagagtatgaggactca
tgtctgattgtcagatatctggcctccatgaggccgtttgcacagagctttgatatttat
ttatcacagattctgagggtgcttggtgagagtgccatcgcagtcagaactaaagccatg
aagtgtttgtctgaagtagtagctgtggatccaagtattctggcgcggttggacatgcag
cgtggggttcactgtcgcctcatggataactctaccagtgtgcgagaggcggcggtggag
ctgctcggccgtttcgtgctaagtcgaccggagctcattgagcagtactacgacatgctc
attgaaaggatattggacacaggtattagtgtcaggaagagggtcatcaagatcttgaga
gatatttgcctggagcagccggacttccacaaggtgaccgagatgtgtgtgaggatgatc
cgaagggtcaacgatgaggaggggatcaagaaactggtgaatgagactttccagaaaatc
tggttcacccccacacccagtcatgacaaaaatgcaatgacccggaagatcctgaacatc
acagacgtggtgtctgcatgcaaagattcaggctacgactggtttgagcagcttctccaa
aatctgctcaagtctgaagaacaagcgtcgtacaagcctgccaagaaggcctgtgttcag
ctggtggacaatctagtggaacacatcctgacatatgaagacactcttgcagactgtgaa
gacaaaggggtcacctcaggtcgtctggtatcatgtatcaccactctatacctgttctgc
aagatcagagcacagctgatggtcaaacacgccatgactatgcagccctacctgacctcc
aagagcaatactcagaacgacttcatggtgatctgtaacgtggcaaagatcctggagctg
gccgtgcctctgatggagcaaccaagtgagactttcctcaccaccatagaagaagacttg
atgaagctcattatcaaatatggcatgacggtcgtacaacactgtgtcagctgtcttggt
gctgttgtgaacaaggtcacacacaactacaagttcgtctgggcgtgtttcaatcgctac
tatggagctcttgcaaaactgaagacccagcaccaagaggaccccaccagtgtcaccctg
gctaccaacaaacctactctcctgcgctcactcttcactgtgggggctctctgccgacac
tttgattatgatcaagaggagttcaagggcactagcaagatcgtcatcaaggagaaagtg
ttggagcttctgttgtacttcaccactcatgaagatgaagaggtccagatcaaggccatc
ataggtctcggcttccagttcatcatgcatccagagctcatgtttgttcaggatgtgaag
gtcctgtataacaacaccctgtcagaggataacccttcggtcagtcggaggatccaggtg
ctgaaaaacctgcagatatacctgcaagaggaggactctcgaatgcaggtggccgatcgt
gaatggaagaatcaggaaaagcaggaggatctgaaggaaatgggagacatctcatcaggc
atgagcagctccataatgcagatctacctgaagcaggtgctggagtccttcttccactct
cagtccactgttcgtcacttcgccctgagcgtcatccttctgactctcagccagggcctc
atccatcctgtgcagtgtgtgccatacttgattgccatgggaaccgacccggagccaacc
atgaagaacaaggccgatcaacagctggtggagattgacaagaaatatattggcttcatc
cacatgaaggccgtagcagggttgaagatgtcttatcaggtgcaacaggccataaacgga
gccaaaagcccactgcttcgaggttttcgtccggatgacacagacaccgctctctgcgct
catctctactctatggtgcgagggaaccgacagcacaggcgggctttcctcatttctctg
ctcaacctgtttgatgacagctcaaaaacagaggtgaacatgctgttgttcgtagcagac
aacttagcctgcttcccctaccagacccaggaggagcctctgttcatcatgcatcatgta
gacatcacgctgtcagtctctggcagcaacctgctccagtccttcaaggagtctttacgg
aaagagcctgtcaatcaggaagaggagatgaaggcaaaaaagaagaagaagaagaaaaag
aagaagaagaagaagcatcataagagacaactgggctcggatgaggacgatgaagaggag
gacgaggagcagagcagtagctcctccagcagcagcagtgaggaggaagaggaggtggtg
cacagggcgaagaaacctgtggatcatgattctgactttgaagatgaggacgcagtgatg
tcccgcctgcccgaaaactccaaccctcttctggagttttccagctcctcgcagggcatc
ctgctgctgctgatgctcaaacaacacctgaagaatctgttcggtttaacagacagcaaa
atccagaagtattccccgacagagtctgccaaagtgtacgacaaggctgtgaacaggaag
tctaaggtgcactttaaccccggtcagacactgctctacctgaagagtgatctggccaac
acggagctcagccacgagaccaagaggaatattgttaaacagtatttggatttcaaggta
ctgatggagcacttggatcgtgacgaagaggaccaagagggtgaagcgaatgcaaacgcc
agaaacaaagccattacttcactgctgaagggcccaaaaccagtgaaccacaaccacaat
aaccacactgctccagtggagtcagaggaggaggagagtgaagctgaagagccccctgtg
cgcaaaccgaagaaagccgtagagaccccagaagacacgggcaacctgcacgagagagta
aaggccatggacatcattgccctctgctgtcccaaattcaaagacagaccacagatcgcc
agggtcatccagaggatcaaaactggctacagcatacactggatgactggttcttactct
gggtcctgggcggaggtaaagaaacgggaaggtcgcaaaaaggtgccttgggttgacacc
atcaaagaatcagacatcatttacaagaaaatatccttcgcaagtggacaaaagctgtcg
aacaaagtggcacagacgttacgggatctatacgctgccaaggacggggactaa
DBGET
integrated database retrieval system
