Pseudochaenichthys georgianus (South Georgia icefish): 117456113
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Entry
117456113 CDS
T09629
Symbol
sema4d
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-4D
KO
K06521
semaphorin 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117456113 (sema4d)
CD molecules [BR:
pgeo04090
]
Proteins
117456113 (sema4d)
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GFIT
Motif
Pfam:
Sema
PSI
I-set
ig
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
117456113
NCBI-ProteinID:
XP_071061093
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Position
12:complement(13871383..13902263)
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AA seq
913 aa
AA seq
DB search
MHQYSLADAMTDKGNFTVPKLTESNMGFGVLGVFLGLLLEVSTHGPNAVPRTSWRHQDLD
LMEFSEPGIFNYSTLLLSEKRDALYVGAREAIFELSKKNVTVKNNKVEWTVAENPMVMCT
LKGKSKEKDCLNYIRVLQVVDDERLYVCGTHAFQPQCDYLNLADFSLDRQPEDGRGKCSF
DPSQSFTTVMVDGELYSGTAYNFLGSEPIMSRYSPSQSLLRTEYSTSWLNEPSFVFADVI
SEGSNRVDGEDDKIYYFFTEVSVEYEFFGKLLIPRVARVCKGDLGGQRTLQKKWTSFLKA
KLVCSMPELNFVFNVVHDVFILKGADWKDTVIYGVFTSQWGNVGLSAVCAYNMTAVEDVF
SKGKYMQKVTVEQSHTKWVRYNGITPTPRPGACINNLMRQQNISSSLHLPDKTLQFVKDH
PLLEDPVLPIGNGPRLITKDVNYTQIVVERVRALDGKIYDVMFTGTDKGILHKSVVYEGE
VHIVEEIQLLKNSESIKNLLLSSETRSLYAGSDSGVVQSPTAFCVRYRSCADCVLARDPY
CAWDPHTAACVNILDAPSQQPRRLIQSLNGDADKCPSASGLSVKDYHRVKVKPGSSAELP
CLARSNLAQVMWKSNGSVLTEASRFHLIAENGLLIYSVAPEDQGHYECWSVEWAPAAGKN
FSRLLVGYVLSLIPPPRAPQQAGHVTPPLNSQETSSTQAAEGNGKTDRALLTSAIAPPSF
TATAQFTSPPQTDSSLTPPPSSTIRFQPKLPPLSSNTPRSQDSRVPAAEYLQHNNSTALL
FLFLLFFLLFLAALAYNCYMQYLPAPCLRLRAALLGSHKSTHQPEYRACEAGLMEATTSD
KMNMTEQPTQNGSQTTQNLKALRDTGYETEPECGNGRIPSHTCGGDSPSQEKPFDVDCES
QPIEFADADEPYC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagtattcgctagccgacgccatgacggacaaaggaaacttcacagttccaaag
ttaacagagtctaacatgggattcggcgtgctgggagtgtttctggggcttctcctcgag
gtctccacgcatggacccaacgctgtgcctcgaacctcctggagacaccaagatttagat
ctgatggagttttctgagccggggatcttcaactactccacgctgttgctgagcgagaaa
agagacgcgctgtatgtgggagcacgggaggccatctttgagctcagcaagaagaatgtg
acggttaaaaataacaaggtcgagtggacagttgcagaaaaccccatggtgatgtgcact
ttaaaaggaaaatcaaaggagaaggattgtctaaactacattcgagtgctgcaagtcgta
gacgatgagcggctgtatgtctgcggcacgcacgcctttcaacctcagtgtgactacttg
aacctcgctgacttctcgttggaccgtcagcctgaagacggccgggggaagtgctccttt
gacccgtcacaaagctttactaccgtcatggttgatggagagctgtactcggggacagct
tataacttcttaggcagcgaacccattatgtccagatactctccatcccagtccctgctg
aggacagagtactccacatcatggctcaatgagccaagttttgtttttgctgatgtgatc
agtgaagggagcaacagagtggatggcgaggacgataaaatctactacttcttcactgag
gtgtcagtggagtacgaattctttggcaagctgctcatccccagggtggcccgcgtctgt
aagggtgacctcggggggcagcgcactttgcagaaaaaatggacgtccttcctgaaagcc
aagctggtgtgctccatgcccgagctcaactttgttttcaacgtagtacatgatgtgttc
atcctgaagggcgccgactggaaggacacagtcatctacggggtgttcacctcccagtgg
ggtaatgtgggcctgtcagcagtgtgtgcttacaacatgacggctgtggaagacgtcttc
tccaagggcaagtacatgcagaaggtcacagtggagcagtcccacaccaagtgggtccgg
tacaacggcatcactcccactccacgtcctggagcatgtattaacaacctgatgcgacag
cagaacatcagcagctctctccacctgccggacaagacccttcagtttgtgaaggaccac
cccctgctggaggaccccgtcctgcccatcggcaacgggcctcgcctcatcaccaaagac
gtcaactacacccaaatcgttgtggaaagggtccgcgcgctcgatggaaagatttacgac
gtcatgttcactggaactgataagggaatcctgcacaagtcagtggtgtatgaaggagag
gtgcatatcgtggaggagatccagctcctgaagaactccgagtccatcaagaacctgctg
ctgtcctctgagacgcggtctctgtacgctggctcagactccggtgtggttcagtccccc
acagccttctgcgtccggtaccggtcctgcgcggactgcgtcctggcccgggacccttac
tgtgcctgggaccctcacactgctgcctgtgtcaatatcctcgatgcccccagccaacag
cctaggaggctaatccagagcctgaatggtgacgcagacaaatgtccttcagcatcagga
ctatctgtgaaggactaccatcgtgtgaaggtgaaaccaggaagctctgctgagctgccg
tgcctggcacgctccaacctggcccaggtgatgtggaaatccaacggctcggtgctcacc
gaggcctcgcgcttccacctcatagccgaaaacggtctccttatttacagcgtggccccc
gaggaccaaggtcactacgagtgctggtctgtggaatgggcccccgctgctgggaagaac
ttcagccgcctcctggtcggatacgtcctctctcttattcccccgcccagagcccctcag
caggccggccacgtgaccccccccctcaacagccaggagacatctagcacacaagcagct
gaaggtaacggtaagacagacagagccctactaacgtcggccattgcccctcccagcttc
acagccactgcccaattcacctcccctccccaaactgactcatcactaaccccgccgccc
agcagcaccatcaggtttcagccgaagctcccccccctgagctccaacacgccgcgcagc
caggacagccgggtcccagcggcagagtatctgcagcacaacaacagcaccgcccttctc
ttcctcttcctcctgtttttcctcctcttcctggctgcactagcgtacaactgctacatg
cagtacctgccggccccctgcctgaggctgcgagccgctctgctgggcagtcacaagagc
acccaccagccggagtaccgggcctgcgaggcgggtctgatggaagctactaccagcgac
aaaatgaacatgactgagcagccgacacagaacggcagccaaaccacccagaacctcaag
gcgctgcgcgacaccgggtacgagaccgagcccgagtgtggcaacgggcggatcccctcc
cacacttgtgggggagacagcccgtcccaggagaagcccttcgatgtggactgtgaatct
cagcccatcgagtttgcagatgcagatgaaccttactgctag
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