Pseudochaenichthys georgianus (South Georgia icefish): 117456313
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Entry
117456313 CDS
T09629
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3
KO
K09173
regulatory factor X 1/2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117456313 (rfx3)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Other basic domains
RF-X
117456313 (rfx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
117456313
NCBI-ProteinID:
XP_033952039
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All DBs
Position
12:complement(17172939..17190186)
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AA seq
766 aa
AA seq
DB search
MQTPEAGADSTSTVPLQTTVPVQPTGSTQQVPVQQQAQTVQQVQHVYPAQVQYVEENSGV
YTNGNIRTYSYSEPQLYSQNSGGSYFDTQGSSSQVSTVVTSHGMTNNGGGGNGGMSMNLA
GGQVISTSPGSYIMDNAGPHPATQTARASPATIEMAIETLQKSEGLSSQRSSLLNSHLQW
LLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGN
SKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKFDGCSGESYTAGGQPQ
PGAEEQTVIAQSQHHQQFLDASRALPDFVELDVGQSNTENISPEDVKALQSLYREHCEAI
LDVVVNLQFSLIEKLWQTFWRYSPPDSVEGETITENSSLSEIEARLPHSQLLELCRNEAV
LKWMSTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNAIPQRMIQT
KIAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC
EEGVVQHLEQDFKATLQQQSSLEQWAAWLENVVTQVLKPYEHRSSFPRAARQFLLKWSFY
SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETFMGVMGEFDSLNSLS
LANIDKGDVFSCPDEMSGMDSDLDDDPEESGEPLAKREKSEHEVIQVIQVGALEDGTHPV
VGVVQPGVLHSLPQPPQDHSEHILIPSAATPTIRHCSATGNTYASV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaagcaggcgctgactccacctccaccgtccctcttcagaccaccgtg
cctgtccagcctacaggctccacacagcaggtgcctgtccagcaacaggcccagactgtt
caacaggttcagcatgtttacccagcacaggtgcagtatgtggaggaaaacagtggcgtc
tacaccaatggcaacataagaacctactcgtactcagagccgcagctgtacagccagaac
agtggaggaagctacttcgacacacagggaagctcatcacaagtgtccactgtggtgaca
tctcatggcatgaccaacaatggaggagggggcaatggagggatgagcatgaacctggcg
gggggtcaggtaatcagcaccagtcctggctcttacatcatggacaacgctggaccccac
cctgccacccagacagcaagagcttcacccgccactattgaaatggcgattgagacactc
caaaaatctgagggtttatccagtcagagaagctcgctgctcaacagccatctccagtgg
ctgttggacaattacgagacagcagagggcgtaagtctaccacgctccaccctctacaat
cactatctgcgccactgccaggagcagaaactggaccctgtcaatgcagcctcttttggc
aaactcattcgctccatcttcatgggactccgtaccaggcgcctcgggacaagagggaac
tctaaatatcattactatggtatacgtgtgaaaccggactcgccactcaatagacttcaa
gaagacatgcagtatatggcccttagacagcagccagtccagcagaaacagaggttcaag
ccggtgcagaagtttgatggctgctccggggagagttacacagctggaggccagccccag
cctggtgcagaggagcaaacagtcatcgcacagagtcaacaccaccagcagttcttagat
gcatcgcgggcgctccctgactttgtagagctggacgttggacagagcaataccgagaac
atcagcccagaggatgtgaaagctctccagtccctttacagagagcactgtgaggctatc
ctggatgtggtcgtcaacctgcagttcagtctaattgagaagctgtggcagacattttgg
cgttattctccccctgactccgtagagggggaaactataacagaaaacagcagcttaagt
gagattgaagctcggctgccccactctcagctattggaactgtgcagaaacgaggctgta
ctcaaatggatgagcacctgtgaccatctgatgtaccaggcccttgtggagatcctcatt
cctgatgtcctgagacctattcccagtgccttgactcaagccattcgcaactttgccaaa
agcctggaaggttggctcaataatgccatgaatgccattccacagagaatgatccagacc
aagattgccgctgttagtgcctttgcgcaaacactgcgcagatacacatctctgaaccac
ctggctcaggcggcacgtgctgttttgcaaaacacatcccagatcaaccagatgctgagt
gatctcaaccgtgttgactttgcaaacgtacaggagcaggcatcgtgggtgtgccagtgt
gaggagggggttgttcagcacttggagcaggacttcaaggccaccctgcagcagcagagc
tctctggagcagtgggcggcctggctggagaatgtggtcactcaggtgctcaagccttac
gagcaccggagcagcttccccagggcggctcgccagttcctgctcaagtggtccttctac
agttctatggtgatcagggacctgaccctgcgcagtgctgccagcttcggttccttccac
ctgattcgcctgctgtacgacgagtacatgttttacctggttgagcatcgcgtggcacaa
gctactggagagacattcatgggtgtcatgggagagtttgacagcctcaactccttgtcc
ctggctaacattgataaaggggatgttttctcctgtccagatgagatgagtgggatggac
agcgacttagacgacgacccggaggagagcggggaacctctggccaagcgagagaagtct
gagcacgaggtgatccaggtgatccaggtgggggcgctggaggacgggacccaccctgtg
gtgggggtggtccagccgggcgttctccactcgctgccccagcccccgcaggaccacagc
gagcacatcctcatcccctctgccgctacgcccaccatccgccactgcagcgccacgggc
aacacctacgcctccgtctga
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