Pseudochaenichthys georgianus (South Georgia icefish): 117456329
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Entry
117456329 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule 2-like
KO
K06491
neural cell adhesion molecule
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117456329
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117456329
04517 IgSF CAM signaling
117456329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117456329
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117456329
04090 CD molecules [BR:
pgeo04090
]
117456329
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117456329
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117456329
04091 Lectins [BR:
pgeo04091
]
117456329
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
117456329
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
NCAM1/2
117456329
CD molecules [BR:
pgeo04090
]
Proteins
117456329
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117456329
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117456329
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117456329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_PDGFR_d4
C2-set_3
Ig_C17orf99
Ig_Rha78A_N
V-set_CD47
Ig_6
Fn3_VIN3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
117456329
NCBI-ProteinID:
XP_033952061
LinkDB
All DBs
Position
2:12510940..12614231
Genome browser
AA seq
648 aa
AA seq
DB search
MRPYKARPYKMRPYKARPYKTRPYKHGPYKARPYKARPYKARLPPVLSVFQPAFNATADY
QESVTFTCMTSGSPDPLVTWHRKGQQLEPSEQYIIARLDGGRSMLTIRNIRQGDGGTYTC
RATNKAGSQEREIFLKVFVQPHITQLKNVTAVEGSAAMISCGAEGEPLPDISWRRASDGK
AFTDGDKSQDGRFEVRGRHGKSVLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYIP
KLLSNHTIFYSWEGNAVNISCDVMSNPPATMLWRRERFTISAEGTTNTRVHSAEGKSVLE
VTPMSDRDFGRYNCTARNNIGVRYQEFILAQADVPSSPYSVRLSAVSQRLATVTFMKPDS
HGGVPISFYLVQYKDVGSREWRDVKSHSIQTTVVLTALEPXTTYEVRVAAVNGKGQGEFS
HTESFQTLPIREPSPPAVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYRTDKEEQWMTK
LVPGMNDFAMLQPLQWNTRYEVEITARNVKGLSEPSFYQFFMPQKPDITAESLFSGLGLG
SVVGLGLGALLVLLALVDVGCFFLRHCGLLMCITRSVCGKKTSTSGKGKEIEEGKAAYLY
TFNSRPHHLFDHTCTSCTDSGGVLRVEVCTGTVLREDPSRLYEGEEDS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgtacaaagcgcggccgtacaaaatgcggccgtacaaagcgcggccgtacaaa
acgcggccgtacaagcacgggccgtacaaagcgcggccgtacaaagcgcggccgtacaaa
gcgcgcctccctccggtgctctcggtgtttcagccggccttcaacgccaccgccgactac
caggaatcagtgaccttcacctgcatgacctctggatcacctgaccctctggtcacatgg
cacaggaaggggcagcagctggagccgtcggagcagtatattatcgcccgtctggatgga
ggacggagcatgttgacgatccgtaacatccgccagggggacggaggaacctacacctgc
cgagccaccaacaaggcggggtctcaggagagggagatcttcctcaaagtgttcgtccag
ccccacatcacgcagctgaagaacgtgacggcggtggagggcagcgccgccatgatctcc
tgcggggcggagggcgagccgctgcccgacatctcctggaggagagcgagcgacggcaag
gccttcacggacggagacaagagtcaggacggacgctttgaagtgcgcggacgtcacggg
aagtcggtgttgaccatcagcggcgtgaagctcacagatttgggtcgctttgactgcgag
gcgttgagccggatcggaggccatcagaagagcatgttcctggatatagagtatatccca
aagctcctgagcaaccacaccatcttctactcgtgggagggcaacgcggtgaacatcagc
tgcgacgtgatgtccaaccctccggccaccatgctgtggaggagagagaggttcaccatc
tctgccgagggcacgaccaacaccagggtgcacagcgccgagggcaagtctgtgctggag
gtgacgccgatgtccgacagagactttggacgctacaactgcacggcgaggaacaacatc
ggggttcgatatcaggagttcattctggcgcaggcagacgtcccatcaagtccgtactcg
gtgcgtctctcagctgtttcccagcgtttagccaccgtcaccttcatgaagccagactcc
catggaggcgttcccatcagcttctacctggtccagtacaaagacgtggggtctcgggag
tggagggacgtgaagtctcacagcatccagacgacggtggttctgacggcgctggagccc
naaaccacctacgaggtccgagtggcagccgtcaacgggaagggtcagggagagttcagc
cacacggagagcttccagactctacctatccgagagcccagtcctccggcggtccacggg
cagagagggatgggtaaggcctacaggctgggtctggtgaagcaggacgacggagggatg
cccatcgtggaatacatcgtcaagtacaggaccgataaagaagagcagtggatgaccaag
ctggtcccggggatgaatgatttcgccatgctgcagccgctgcagtggaacaccagatac
gaagtggagataacggcacgaaacgtcaagggcctgtcggagcccagcttctaccagttc
ttcatgccccagaaacctgacattacagcagaatccctgttcagcggcctggggctgggc
tccgtggtgggcctgggcctgggggcgctgctggtcctcctggcgctggtggacgtgggc
tgcttcttcctgcgtcactgcggcctcctgatgtgcatcacccgctccgtctgcggcaag
aagacctccaccagcggcaagggcaaggagatcgaggaggggaaggccgcctacctgtac
accttcaacagccgcccccaccaccttttcgaccacacgtgcacttcctgtactgacagt
ggaggtgtcctgagagtggaggtctgcaccggaactgtcctgagagaggacccctctcgc
ctttacgagggggaggaagacagctga
DBGET
integrated database retrieval system
