Pseudochaenichthys georgianus (South Georgia icefish): 117456373
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Entry
117456373 CDS
T09629
Symbol
kcnt1a
Name
(RefSeq) potassium channel subfamily T member 2 isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117456373 (kcnt1a)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117456373 (kcnt1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117456373
NCBI-ProteinID:
XP_033952115
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Position
12:27899944..27978350
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AA seq
1258 aa
AA seq
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MQLTQEEDFVKGDSTPTTAALQSDGSAGSPSKMCSECYVNQTFVHDDGTVNDHKPRSPSA
PLQTPSSSSGVILDIAALNMEQQESEEVPPLPPRFRFRDLLLGDQSFQNEDRVQVEFYVN
ENTFKERLKLFFIKNQRSSLRIRVFNFSLKLLTCLLYIIRVVTDNPGHSAGQQNANSPNV
KCVDCQWNGSVQDREINWGLIFWVDRKVPVWAIQVIVAIISFLETMLLMYLSYKGNIWEQ
IFQVSFLLEMINTVPFIITIFWPSIRNIFIPVFLNCWLAKCALENMINDVHRAIQRTNSA
MFNQVLILICTLLCLVFTGTCGIQHLERAGKNLSLFNSFYFCIVTFSTVGFGDVTPRIWP
SQLLVVIMICVALVVLPLQFEELMYLWMERQKSGGNYSRHRAQTEKHVVLCVSALKIDLL
MDFLNEFYAHPRLQDYYVVILCPSEMDLQVRRVLQIPLWSQRVIYLQGSVLKDQDLLRAK
MDDAEACFILSSRNEVDRMAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHV
VCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGREGQQSPEQWQRMYGCCSGNEVYHIRV
CDSKFFGEYNGKSFTYASFHAHKKYGVCLIGIKKDDNKSILLNPGPRHIMAATDTCYYIN
ITKEENSAFIFNQEQRKGRPVGGLYDGPSQLPVHSIIASMGTVAMDLHNTSPPDGGKLVP
PSVNGAGGRRPSIAPVQEIADSSSILPCDLLSDQSEDDSVFTDEKSTEYVKGYPPNSPYI
GSSPTLCHLLAEKAPFCCLRLDQGCRHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVP
LRAYYRPRKELNPIVLLLDNPPDNHFLEAICCFPMVYYMAGTIDNLDSLLQCGIIYADNL
VVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSL
ALSKLEKKERDKGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMILIARLLLGLDT
TPGSGYLCAMKVTEEDLWISTYGRLFQKLCSSSAEIPIGIYRTESHMFPTSESQVSVSVD
ECEDTKEKGEESRSNDQSDHPQLRKKSMQWARRLSKKSVRWQGSSRDSNRDHGQRIAQQR
LNLYRRSEREELSELVRNRMKHLGLPTSGYEDLTNLTASDVMNRVNLGYLQDEQNDHQNT
LSYVLINPSPDTRLELNDVVYLIRSDPLAHVPEEPLLHRSSLKERHESETEPREDTQL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaacccaggaagaagactttgtgaagggggactcgacgccgaccaccgcagct
ctccagtccgacggcagcgccggatctccttccaaaatgtgcagtgaatgttacgtgaac
cagacatttgtgcacgacgatggcaccgtgaacgaccacaagccacgctccccctcagct
cctctccagacccccagcagcagcagtggggtgatcctggacatcgctgcccttaacatg
gagcagcaggagagcgaagaggtgcctccgctgcccccccgcttccgcttccgagacctg
ctgctcggggaccagagcttccagaatgaggacagggtgcaggtggagttctatgtgaac
gaaaacaccttcaaggagcggctgaagcttttcttcatcaaaaaccaaagatcaagcctc
cgcatccgtgtgttcaacttctccctgaagctgctcacctgtctgctgtacatcatccgg
gtggtgaccgataacccgggtcacagcgcaggacaacagaacgccaacagtcccaacgtc
aaatgtgttgactgccagtggaacgggtcggtgcaggacagagagattaactgggggttg
atcttctgggtggacaggaaagttcctgtctgggccatccaagtgattgttgccatcatt
agttttctggagacgatgttactgatgtatctcagctacaaggggaacatttgggagcag
atcttccaggtgtcttttcttctggagatgattaacacagttcccttcatcatcacgatc
ttctggccctcgatcagaaacatcttcatccccgtgtttctcaactgctggctggccaag
tgtgctttggagaacatgatcaacgacgtgcacagagccatccagcggaccaactcggcc
atgttcaaccaggtgctgatcctgatctgcacgctgctctgcctggtgttcaccggcaca
tgtgggatccagcacctcgagcgggcggggaaaaacctgtcgctcttcaactccttctac
ttctgcatcgtcaccttctccacggtgggcttcggagacgtcaccccccgcatctggccc
tcccagctgctggtggtcatcatgatctgcgtggctctggtggtgctgcctctgcagttt
gaggagctgatgtatctgtggatggaaagacagaagtccggagggaactacagccggcac
cgcgcgcagacggagaaacacgtggtgctgtgtgtcagcgcgctgaagatagacctgctg
atggactttctcaatgagttctacgcacaccccaggctgcaggactactacgtggtgatc
ctgtgccccagtgagatggacttgcaggtgcgcagagtgctgcagatccctctgtggtct
cagagggtcatctacctgcaggggtctgtcctcaaagaccaggacctgctcagagccaaa
atggatgacgctgaggcctgttttattctgagcagtcgtaacgaggtggatcgcatggca
gcggaccatcagaccatcctgagagcctgggctgtgaaggactttgctcccaattgcccc
ctttatgttcagatactcaaacctgaaaataagtttcatgtgaaatttgcagatcatgtt
gtgtgtgaggaggagttcaagtacgccatgctggccctcaattgtgtgtgtcccgccacc
tccaccctggtcacgctcctcgtgcacacctcccgcggacgagagggacagcagtctccg
gagcagtggcagaggatgtacggttgttgctctggaaacgaggtgtaccacatccgagtg
tgtgacagcaagttctttggagagtataacggcaaaagctttacatacgcctcctttcat
gctcacaagaagtacggcgtgtgtctgatcgggataaagaaggacgacaacaagagcatc
ctgctgaaccccggcccccgccacatcatggccgccaccgacacctgctactacatcaac
atcaccaaggaggagaactccgccttcatcttcaaccaggagcagaggaagggccgccca
gtgggggggctgtacgacggaccctcgcagcttcctgtgcacagcatcatcgccagcatg
ggcactgttgccatggatctccacaacacgagtccccctgatgggggtaaactggtcccg
ccctcagtaaacggagcagggggtcgccggccgagcatcgctccagttcaggagatcgcc
gactcctcctccattctgccatgtgaccttctcagcgaccaatcagaagatgactctgtc
ttcacagatgagaaatctactgagtacgtgaaaggttatccgcccaactctccgtacatc
gggagctcgcccaccttgtgccatctgttggcagagaaagctccgttctgctgcctacga
ctggaccagggttgcaggcacaacagctttgaggacgctaaggcctatggttttaaaaac
aagctcataattgtgtctgctgagacagcagggaacggtctttataactttatcgttcct
ctcagagcctattacagacccagaaaagaactcaatcccattgtcctgctgctggataat
ccgccggataatcacttcctggaggccatctgctgtttccccatggtctactacatggct
gggaccatcgacaatctagacagcctgctgcagtgtggaatcatctacgctgataatctg
gtggttgtggataaagagagtacgatgagtgccgaagaagactacatggctgatgctaaa
actattgtcaatgtgcagaccatgttcaggttgtttcccagcctgagcatcatcacagag
ctgacgcatccctccaacatgagattcatgcagttcagggcaaaggactgctactcgctg
gccctgtccaaactagagaagaaagagcgtgataaaggctccaacttggccttcatgttt
cgcctacccttcgctgcagggcgagtgttcagtatcagcatgctggacaccctgctgtat
cagtcctttgtgaaggactacatgatccttattgcaaggctgctgctggggctggacacc
actccagggtcagggtacctctgtgctatgaaggtcacggaggaagatctgtggatcagt
acttatggcagactgttccagaaactctgctcctccagtgccgaaattcctattgggatc
tatcggacagaatcccacatgttcccaacttctgagtctcaggtgtcagtcagtgtggac
gaatgtgaggacaccaaggagaaaggggaggagtctcgcagcaacgaccagtcagatcac
ccccagctgaggaagaagagcatgcagtgggcccggcgtctgagtaagaagagcgtgagg
tggcaggggtccagccgggactcgaaccgggaccacggccagcgcatcgcccagcagcgc
ctcaacctgtaccgccgctcagagagggaggagctctccgagctggtccgcaaccgcatg
aagcatctgggcctccccacctcaggatacgaagacctcactaacctgacagccagcgac
gtcatgaacagagtcaacctgggatacctgcaagatgagcagaacgatcaccagaacacc
ctgtcttacgtgctgatcaacccctctcctgacaccaggctggagctcaatgacgttgtg
tatttgattcgttcggaccctctggctcacgtcccagaggagcctcttctccacagaagc
agcctgaaagagagacacgagtctgaaacagagcccagagaggacacccaactctga
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