Pseudochaenichthys georgianus (South Georgia icefish): 117456436
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Entry
117456436 CDS
T09629
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117456436 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117456436 (dcp2)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
117456436 (dcp2)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117456436 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
117456436 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
117456436
NCBI-ProteinID:
XP_033952216
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All DBs
Position
12:153792..167135
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AA seq
387 aa
AA seq
DB search
MFSSNMETKRVEIPTGMLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAVFHHCPFLLPNGEDVQKILEQWKEYKMGVPTFGAIILDESLENALLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNRISKDVFLEQKITDQVVRLY
IIPGVSQDTKFNPRTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPL
REWINKLKGESTDSDDDFANNGNTPNKPSDNARSKSRRLPGNEAFPGEAWAKNKQRAAGQ
LSQYEINQSPSLKSSGKKSQDSAVKKGANDNGANNQQKEDKKLQPRRLQDSFEKEGSPSN
DSEHVLSSKVFLNFKFDREAIMKCFDY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctccaacatggaaacaaaaagagtggagattccgaccggaatgctggacgac
ctctgcagccgcttcatcctgcacatccccagcgaggagagggacaacgctatccgggtg
tgtttccagatcgagctcgcccactggttctacctggacttctgcatgcagaacactccc
ggagctcctcactgcgggatcagagacttcgccaaagcagtgttccatcactgtccgttc
ctgctgcctaatggagaagacgtccagaagatcctggagcagtggaaggagtacaagatg
ggagtgccgacttttggagccatcattctggatgaatctctagaaaacgctctgctggtt
cagggatacctcgctaagtccggctggggctttccaaaggggaaagtcaacgaggatgaa
gctcctcacgactgtgccgtgcgagaggtgctggaggagacgggcttcgacataaagaat
cgtatttctaaagacgtgttcctcgagcagaagatcacggaccaggtggttcggctctac
atcatccccggggtgtcgcaggacacaaagttcaacccacggacgaggaaggagatcagg
aacatcgagtggtttcctattgagaagctgccgtgtcacaggaacgacatgacgcccaag
tctaaactcggactcgcccccaacagattcttcatggccattcccttcataaggccgctg
agagaatggatcaataagctgaaaggagagtcaacggacagcgacgacgactttgcaaac
aacggaaacactccaaacaaaccttcagacaacgctcggtcgaagtctcgccgcctccca
ggtaatgaggcatttccaggagaggcatgggccaaaaataagcagagggcggcgggccag
ctgagccagtacgagatcaaccagagcccaagtttgaaaagtagtggtaaaaagagtcag
gactctgcagtgaagaaaggagccaatgataatggggccaacaaccagcagaaagaagat
aaaaaacttcaacccagaagactgcaagacagttttgagaaagaaggatctccaagcaac
gactcagagcacgttctgtcctccaaggtcttcctcaatttcaaatttgaccgagaagcc
atcatgaaatgtttcgactactga
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