KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117456600
Entry
117456600         CDS       T09629                                 
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
  KO
K06247  laminin, gamma 3
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510  Focal adhesion
pgeo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117456600 (lamc3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117456600 (lamc3)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B GPS2_interact JAG1-like_EGF2
Other DBs
NCBI-GeneID: 117456600
NCBI-ProteinID: XP_033952416
LinkDB
Position
12:complement(23188030..23334337)
AA seq 1614 aa
METYFAVNSFLLALLLSLHLHCHLFVWAAMDSCLDEEGAPSHCMPKFENIAFNRTVVVSN
VCGSPPEDYCMQTGSTRSCHHCDASDPELSHNASLLTDFHMDKERTWWQSQSMFYGVQHP
NSVNITLHLGKAFEITYIRLKFYTSRPESFAIYKRTEQNGTWLPYQHYSASCRKTYGKDD
KEYIRPGGDERNALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSVVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECFEGEHGGLVCACQHH
TAGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECAFDVEQHRSTGRGGRCVSC
RDHTDGAHCERCRENHYRRFDEEPCLPCNCDINGSLSLQCDVEGGCACKNGVTGMKCDTC
RAGFHSLGPGGCRLCECASSGSVGVCSALDGRCHCKPHVEGQSCDRCRPGFFNLQHVNTA
GCQACFCFGHSLACSPSNRYAAVHITSDFLEDQDGWLGKFSGGQEYPLLWKEGEVYLLPL
TEEDIGFYKAPEKFLGHQIHSYGQLISITFTSETPELLPDHVTLLLRGSGVTLTADLSPQ
TVLDPNPRLTWQQTFTVRLHESEIGFKPALSAFEFQQLLYNLTSLRISNAGGQNYTSQLA
EVSLASASVSSGPPNPPAPWVELCSCPPGFAGHFCERCAPGFTREDPSRGPLSTCVPCIC
HGHGTCHPETGVCECSDFTTGMTCEHCLDGYYGNALIGTPADCQHCPCPDRTSCAEIAQT
GQVVCTNCPAGQTGIRCQMCEDGYYGDPLGQSGLARPCVRCDCNGNVDLNALGVCDHLTG
RCLKCLGHTEGEHCERCQRGFYGDALNQTAVQKCKACSCSPGGTSGYVNECHPHTGNCLC
LGHVTGRDCSYCEMGFFNLQPGVGCERCRCSPIGSASDACHPITGQCVCRAGVEGTLCDS
CRVGFFGFSSRGCRACNCDPMGSVSMQCHGNGTCHCRQGFVGYKCDKCELNYYHSRDTHQ
CEECPVCYGLVKKQAEKLRTRLQDLEKLLARFDCRGGFGKQHHLLKYHMAKLYEHEHQGE
DSLPNALEDFLAFQEAREAFIKQFSLLEASAGSLLDQLNGITTTLNCSISMTEMESGTHE
GSRAVCQAFTDTLFIVRASQKQLKQATLDLDSMIIPFEMVSGPNKWNTMVNDSQALLKSQ
REMAEHMEAVASRAVRASEQTFSFLMDLLQDNSTEEYIRSLTEQITHMQQQKGNLTVQVN
ETAAQQLALEEAAAGMTIALGNITSSLHQLALTEASPSPEHSTEWGEDLLKQTEELDRQI
QTKESLVRKMREEMKPLKQTANKKLEIEEDISELRAHAQGSKVMALTSVVRGKEVESEAI
ALHRELQYMVREWPRQQAQTKASIKKEKPLEEKVLADVRRKVSQIKEMLEPALQNSSLSS
NITQQAEHTAHAVAKESKAILIQAKHTRTASAHLSSHIDSALQQLSEQELQTDRARSMFT
AEPQVSLAGVKEDMEAARLQLKAFSVTLTELISKIDGNVPLERFDQILDETERRLSMLHG
SVDSPTLGVKIQKLRSAAQEQHSRMSLIEQDLQEITEERDSLRDIALNLPASCP
NT seq 4845 nt   +upstreamnt  +downstreamnt
atggagacatattttgctgtgaactcttttctccttgcccttcttctctctcttcatctt
cactgccacctctttgtttgggccgcaatggactcctgcttggatgaggagggggccccg
agccactgcatgcccaagtttgagaacattgccttcaaccgcacagtggtggtgtccaat
gtgtgtggttccccacctgaggactactgcatgcagaccggctccacgcgctcttgccac
cactgtgacgcgtcagatccagaactgagccacaacgccagcctcctcacagacttccac
atggataaggagcgcacctggtggcagagccagtccatgttttatggtgtccagcaccct
aattctgtcaacatcaccctacacctcgggaaggctttcgagataacttatatacgattg
aaattctacaccagtcggccggagagctttgccatctacaagcgcacggagcagaatggg
acctggttaccttaccagcattacagcgcctcttgtaggaagacctatgggaaggatgac
aaggagtacattcgcccaggaggtgacgagaggaatgctttatgtaccgatgagttcagt
gatatctctcccctgaccggaggaaacgtggctttctccaccctggaggggcggcccagt
gcttacaactttgaccagagcgtggtgttgaaggaatgggtgactgccactgacctgctc
atctctttggacaggcttaacacctttggagatgagttcttcaaggacgctaaagtgttg
cgctcgtacttctatgccatctctgacttctctgtgggtggcagatgtaaatgtaacggt
cacgccagcgagtgttttgagggggaacacggggggctggtgtgtgcctgccagcatcac
acggcgggagatgactgccagagatgtcaccccttttaccaggacagaccctgggccagg
gccacgggggactctgccaacgagtgtctgaagtgcaactgcagcgggaggtctgacgag
tgtgcgtttgacgtggagcagcaccgcagcaccggcaggggggggcgctgtgtgagctgc
agagaccacaccgacggagcccattgtgagcgctgcagagagaaccactacaggaggttt
gatgaggagccctgcctaccctgtaactgcgatattaacggttcactgagtctgcagtgt
gatgtagagggagggtgtgcgtgtaaaaatggcgtgacagggatgaagtgtgacacgtgt
cgggctggctttcactcgcttggccctggtggctgcaggctctgtgaatgtgcctccagc
ggcagtgtgggcgtctgctctgctctggacggacgctgccactgtaagccacacgtggag
gggcagagctgcgacagatgcaggcctggctttttcaacctacaacacgtaaacacagca
ggctgccaggcgtgtttctgcttcggccactcgctggcctgctccccgtccaatcgctac
gctgctgtccacatcacctctgacttccttgaagatcaggacggctggttggggaagttc
tctggagggcaggagtaccccctgctgtggaaggaaggtgaagtctacctgctgcctctt
actgaggaagacatcggcttctacaaagcccccgaaaaattcctgggtcatcagatccac
agctacggccagctcatctctatcaccttcacctccgagacccccgagctgctgccggac
cacgtcaccttgctgctgcgcggctccggagtcaccctcactgctgacctttcaccccaa
acggtgcttgaccctaaccctcgcctcacatggcagcagaccttcactgtcaggctccat
gaaagtgagataggatttaaaccagcgttgtccgcgtttgagttccaacaactgctttac
aacctgacgtctctcagaatcagcaacgccggaggacagaactacacgtcgcagctcgcg
gaggtatccctcgcctcagcttccgtctcctccggcccaccaaatcctcctgccccctgg
gtagagttgtgttcctgtcccccgggatttgcgggacatttttgtgagcggtgcgcccca
gggttcacccgggaagaccccagcagagggccgctctccacatgtgtgccctgcatctgc
cacgggcatggaacctgccacccagagacaggggtgtgtgagtgctcagacttcaccact
gggatgacctgtgagcactgcctggatggttactacggcaacgctttgattggcacgcct
gcggactgtcagcattgcccttgcccggaccgtaccagctgtgctgaaattgctcagaca
ggacaggtggtctgcaccaactgccctgcaggacagacaggtatccggtgtcagatgtgt
gaagatggttactatggtgacccactgggacaatctggtttggctcgcccgtgtgtgaga
tgtgactgcaatggtaacgtggacctcaacgcgctgggagtgtgcgaccacctcaccggg
cgatgcctgaagtgcctgggacacacagagggagaacactgtgagcgctgccagaggggt
ttctacggcgacgccctcaaccagacagcggtgcagaagtgcaaagcgtgcagctgcagt
cctggaggaacctctggctatgtgaatgaatgccaccctcacacaggaaactgcctgtgc
ctcggtcatgtgaccggacgggactgcagttattgtgaaatgggcttcttcaacctccag
ccaggcgtaggatgtgagaggtgcaggtgtagccctattggctcagcatccgacgcttgt
catccaatcacagggcagtgtgtgtgtcgtgcaggagtggaggggacgctgtgtgattct
tgccgagtgggcttctttggattctcgtcacgcggttgcagagcctgtaattgcgacccc
atgggctctgtctccatgcagtgtcacggtaacgggacctgccactgtcgccagggcttc
gtgggttacaagtgtgacaaatgtgagctgaactattaccacagcagagacacccaccag
tgtgaggagtgccccgtgtgttatggcctcgtgaagaaacaggcggagaagctgaggacg
cgcctgcaggatttggagaagctgctggctcgctttgattgccgaggtggatttgggaag
cagcaccacctgctgaagtatcacatggccaagctatatgagcatgagcaccagggggag
gattctctacccaacgctctggaggattttctagccttccaagaggcgcgggaggccttc
atcaagcagttctccttgctggaagcgtccgcgggctccctgctagaccagctgaatggc
atcacaaccactttgaactgcagcatcagcatgacggagatggagagcgggacgcatgaa
gggagcagggctgtgtgtcaagccttcactgacacactgttcatcgttagggcgtctcag
aagcagctaaagcaggcgacactggacctggacagcatgatcattccttttgagatggtg
tcaggccctaacaaatggaacacgatggtcaatgactcacaggccctactgaaaagtcag
agagaaatggcagagcacatggaggccgtagccagcagggcggtaagagcctcggagcag
accttcagcttcctgatggatctactgcaggacaactccaccgaggagtacatcaggagc
ctaacggagcaaataacccacatgcagcagcagaaagggaacctgacagtgcaagtgaat
gaaactgcagcccaacagctggccctggaggaagcggctgcaggcatgacgatcgccctg
ggtaacatcacatcatccttacatcagctggctctcactgaggccagcccatcaccagag
cacagcacagagtggggcgaggacctgctaaaacagacggaagagctggaccggcaaatt
cagaccaaagagagtctcgtgaggaagatgagagaagagatgaagcctcttaaacaaact
gccaataagaaactggagatagaggaggacatcagtgagctgcgggctcacgctcagggg
tcaaaggtcatggctctgacgtcagtggtgagagggaaagaggttgagtctgaagccatc
gccctgcacagagaactgcaatacatggtgagggagtggccccggcagcaggcccagaca
aaggcctcgataaagaaggagaaacctctggaggagaaggttctggcagatgtcaggaga
aaggtctcgcagataaaagagatgctggaacccgctctgcagaactccagcctctccagc
aacatcacacagcaggcagaacacaccgctcacgctgtggcaaaggaatccaaagccatt
ctgatccaggccaagcacacgaggacagcgtcggctcacctcagctcgcacatcgactcc
gctctgcagcagctgagtgagcaggagctgcagactgacagagcccgctccatgttcact
gcagagcctcaggtgtccctggccggcgttaaagaagacatggaggcagccaggctccag
ttgaaggccttctctgttacactcactgagctaatcagcaagattgatgggaacgtgccg
ctggagcgttttgaccagatcctggatgagacggagcggcgcctcagcatgctccacggg
agtgtcgacagtccgacgctgggagtgaagattcagaagctgcgttcagccgctcaggag
cagcacagccggatgtccctcattgaacaggacttacaggagatcacagaggagagagac
agtctgagggacatcgctctgaacctgcccgcgtcctgcccctag

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