Pseudochaenichthys georgianus (South Georgia icefish): 117456638
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Entry
117456638 CDS
T09629
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117456638 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgeo01001
]
117456638 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117456638 (cdk9)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
117456638 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
117456638 (cdk9)
Protein kinases [BR:
pgeo01001
]
Serine/threonine kinases: CMGC group
CDK family
117456638 (cdk9)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
117456638 (cdk9)
Brd4/P-TEFb complex
117456638 (cdk9)
7SK RNP complex
117456638 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
117456638
NCBI-ProteinID:
XP_033952465
LinkDB
All DBs
Position
12:complement(475226..484838)
Genome browser
AA seq
397 aa
AA seq
DB search
MQREKTSNAAAATAVAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKMAKIGQGTFGEVFK
AKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRY
KGSIYLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANV
LITRDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA
GCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRK
VKDRLKAYVKDPYALDLIDKLLVLDPVQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNTS
MFEYLAPPRRRGHMPQQQPNQNRNPATTSQTEFDRVF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagaaaaaacaagcaatgccgcggcggcgacggcggtggctgaaaagcccgac
cgtgaggccgccatcatgtccaaatactacgatggagtggaattccctttctgcgacgag
ttctcaaaatatgagaaaatggctaaaataggacaaggaaccttcggggaggtgttcaaa
gcgaagcacagacaaaccgggaagaaggtcgcactgaagaaggtgttgatggaaaatgag
aaagaagggtttccaatcacagctctgagagagatcaagatcctccagctgctcaaacac
gagaacgtggtcaatctgatcgagatctgcagaaccaaagctactcagttcaaccggtac
aaaggcagcatctacctggtgtttgacttctgtgagcacgacctggccgggctgctgagc
aacgccaacgttaagttcaccctggcagagatcaagaaggtcatgcagatgctgctcaat
ggactgtactacatccacagaaacaagatcctccacagggacatgaaggcagccaacgtg
ctgatcaccagagacggggtcctgaagctggctgactttggtctggctcgagccttcagc
ctggctaagaacagtcaggggaaccgctacaccaaccgcgtggtcaccctgtggtaccga
cctccagagctgctgctgggtgagcgagactacggcccgcccattgacctgtggggagca
ggatgcatcatggcggagatgtggaccagaagtcccataatgcaaggcaacactgagcag
catcagctgactctcatcagccagctgtgcggctccatcaccgctgaggtgtggcccggc
gtggataagaagtacgagctgtaccagaagatggagctccctaaagggcagaagcggaaa
gtgaaggaccgcctgaaggcctacgtgaaggacccgtacgctctggacctgatcgacaag
ctgctggttctggacccggtgcagcgcatcgacagcgacgacgcgctcaaccacgacttc
ttctggtccgaccccatgccctcggacctgaagaacatgctctccacacacaacacctcc
atgttcgagtacctggccccgcccaggcggagaggccacatgccgcagcagcagcccaat
cagaacagaaacccagccaccacgagtcagacggagttcgatcgggtgttttag
DBGET
integrated database retrieval system
