Pseudochaenichthys georgianus (South Georgia icefish): 117456654
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Entry
117456654 CDS
T09629
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117456654 (nefma)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117456654 (nefma)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
CTD
Filament_head
FeoC
Motif
Other DBs
NCBI-GeneID:
117456654
NCBI-ProteinID:
XP_033952481
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Position
12:10371181..10375942
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AA seq
1139 aa
AA seq
DB search
MSYTVDTSGSTFRRIMDTRTTGYGYSRSGSSPSSGFRSQSWSRASPGSTMTTSYKRSENM
PVSRAYSSADSGDYQTSMMNGDFKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNKQIEDEI
QALRQKQVSRSQLGDHYDQELQDLRSMLEQIHHDKTQIQLDTDHVEEDIQRLRDRYDEEA
RIREETEAIIRVLRKDMSESELVKSELDKKVQSLQDEIAFIRNNHEEEVNELIAQIEESQ
VTVERKDLQKTDITEALREIRCELEGHSNQNLQQVENLFMCRYSKLTEAADQNKDAIKTA
RDEISDYRRQLQSKTVELEAIRRTRESLERQLNEIEDRHSSDLSSLQETIHQLDNELKST
KWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTPTKVFKSKSDA
PKLRVQHKFVEEIIEETRVEDEATELDEALAEIAQELSATLGGGGDEGEEEEGEEGGEGE
EEEGDKQEGEGEDVEEEVVAATKAKVSSSAPAKEEEEEEDDGKDEDGEGEGGEEEEKEED
GEGEDEGEKGDDAEGGDEVEGDDGGEDEEEIEETVLCSKAPESKASPDQEKAGDKEGSGG
EEEAGADEEDGEQDEDAGSDKASKSVDEKEDKEDAEKTTKEDSKKEEEVVAKTDASKTES
AKPESKKEEAAKTEASKPDSPKSESPKLGSPKSETPKLGSPKSETPKLGSPKSETPKLGS
PKSESPKLGSPKSETPKLGSPKSETPKLGSPKSETPKLGSPKSESPKLGSPKSESPKLGS
PKSETPKLGSPKSETPKLGSPKSETPKLGSPKSESPKLGSPKSESPKLGSPKSETPKLGS
PKSESPKLGSPKSETPKLGSPKSESPKLGSPKSETPKLESPKSESPKLGSPKSESPKLGS
PKSESPKLGSPKSESPKFGSPKSESPKLGSPKSESPKLGSPKSESPKLGSPKSESPKSES
PKPESLKSEIPKPTSLKPESSKPSSPKAESPKSESPKPESPQAKSPKTPLPETPKAAEEK
SEKKSDLTENVEKKDVAMNGDEDKSSSEERKDEEKETDVVSNGVDESTVKEDGSQKVVIT
KTVETITTGEDGSKRVTKSVTVTETVKDEVEEVKEEVLVSTKKTEKHSSLSIKQVTEGE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacggtggacacttcagggagcaccttcaggagaattatggatactaggacg
accggctacggctacagccgatccggcagctccccctccagcgggttccgctcccagtcc
tggtcccgggcaagccccggctccactatgaccacgtcctacaagaggagcgagaatatg
ccggtgtcccgagcctacagctccgcagatagcggtgactaccagacctccatgatgaac
ggagacttcaagcgatccaatgagaaggagcaacttcaagggctcaacgaccgtttcgtt
gtttacatcgacaaggtgcactacctggagcagcagaacaagcagatcgaggacgagatc
caggcgctgcgccagaagcaggtgtcccgctcccagctgggcgatcactacgaccaggag
ctgcaggatctgcggtccatgctggagcagattcaccacgacaagacgcagatccagctc
gacaccgaccacgtcgaggaggacatccagcggctgagggaccgctatgacgaagaggct
cgcatccgggaggagaccgaagccattatccgcgtcctgaggaaggacatgagcgagtcg
gagttggtgaagtcagagttggataaaaaagttcaatctctgcaggatgagatcgccttc
atccgcaacaaccacgaggaagaggtgaacgagctgatcgcccagatcgaggagtctcag
gtgaccgtggagaggaaggatctgcagaagacggacatcaccgaggctctgcgggagatc
cgttgcgagctggagggtcactccaaccagaacctgcagcaggtggagaacttgttcatg
tgccgctactccaagctcaccgaggctgcagatcagaacaaggatgccataaagacggcc
cgtgatgagatatcagactaccgccgccagctccagtccaagacggtggagttagaagcc
atccgcaggacaagagaatctctggagaggcagctgaatgaaatcgaggaccgccacagc
agcgatctgtccagccttcaggagacaattcaccagctggataatgagctcaagagcacc
aaatgggagatggcacgtcacctgcgcgagtaccaggacctgctcaatgtcaagatggca
ttggacattgagattgctgcatacaggaaactcctagagggcgaggagactcacttcagc
actttcccctatcgccaggcggtcacccccactaaagtctttaagtctaaatccgacgct
cccaagcttagggtgcaacacaagtttgtggaggagatcatcgaggagacgagggtggaa
gatgaggcgactgagcttgacgaagccctggcagagatagcacaagagctgtccgctaca
ctcggaggtggaggagacgagggagaagaagaggagggggaagagggaggtgagggagag
gaagaagagggtgataagcaagagggggagggggaagacgttgaggaggaagttgtagcc
gccaccaaagccaaagttagctctagcgcacctgctaaggaggaagaagaagaagaggat
gatggaaaagatgaggatggggaaggagagggaggtgaagaagaagagaaggaagaagat
ggtgagggggaagatgaaggagaaaagggggatgatgcagagggaggtgatgaagtagaa
ggagacgatggaggagaggatgaggaggaaattgaggagacagtgctctgctccaaagcg
cccgagtctaaagcctctcctgaccaagagaaggccggagacaaagaaggcagcggagga
gaagaggaagctggtgccgatgaggaagatggagaacaggacgaagatgccggcagtgac
aaagcctccaagagcgtagacgagaaagaggataaagaggatgctgagaaaaccacaaag
gaagatagcaaaaaagaggaagaagttgtagccaagacagacgcttcaaaaacagaatct
gcaaagcccgagtccaagaaagaagaggcagccaaaactgaggcatcaaaacctgattca
ccaaagtctgaatctcctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgagacccctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgagagccctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgagacccctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgaatctcctaaacttggatccccaaagtctgaatctcctaaacttggatcc
ccaaagtctgagacccctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgagacccctaaactcggatccccaaagtctgaatctcctaaacttggatcc
ccaaagtctgaatctcctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgagtcccctaaacttggatccccaaagtctgagacccctaaacttggatcc
ccaaagtctgaatctcctaaacttggatccccaaagtctgagacccctaaacttgaatcc
ccaaagtctgaatctcctaaacttggatccccaaagtctgagtcccctaaacttggatcc
ccaaagtctgagtcccctaaacttggatccccaaagtctgagtcccctaaatttggatcc
ccaaagtctgagtcccctaaacttggatccccaaagtctgaatctcctaaacttggatcc
ccaaagtctgaatctcctaaacttggatccccaaagtctgaatctcctaagtcggaatct
ccaaaacctgagtcccttaaatctgaaattcccaagcctacatctctgaagcctgaatcc
tcaaaaccaagctccccaaaagcagagtctcccaagtcggaatctccaaaacctgaatct
cctcaagctaaatccccaaagacccccctgcccgagacccctaaagccgctgaagagaaa
tcagagaaaaagagcgacctaacagagaatgttgaaaagaaggatgttgccatgaatggc
gatgaagacaagagcagctcagaggagaggaaggacgaggagaaagaaaccgacgtggtc
tctaacggcgttgacgagagtacggtcaaagaggacggtagccaaaaagtagtgatcacc
aaaaccgtggagacgatcaccactggagaggatggatccaagcgcgtcaccaaatctgtc
actgtgaccgagacagtgaaggacgaggtggaggaggtgaaagaggaggtgctggtgtcc
accaagaagacagagaagcactcctccctgtccatcaagcaggtgacagagggcgaataa
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