Pseudochaenichthys georgianus (South Georgia icefish): 117456856
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Entry
117456856 CDS
T09629
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117456856 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
117456856
NCBI-ProteinID:
XP_033952585
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Position
13:complement(38482118..38488332)
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AA seq
904 aa
AA seq
DB search
MLWVTLLSTIALGWTTPMPMLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISLNLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLGSLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNYLF
RSVSLTHLDLRGNRLKTLPYKGMLEYVGRSLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGEITCENPFHLHGKDLREIKRSELCPLLSDPEIEAKLGIPRIPFSNENTWPTKPSSM
LSSFHNTASSVEYKDRAVKPTKRPRPTKNPPTPRSIYPGINQPPVAGYQTRPPIPIICPA
GCTCNLHINDLGLTVNCKDKGLHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRIAYVQEGAFINLPNLKSLYLNGNDIERLAPGMFRGLQMLRYLYFEYNVIREI
QPNSFSLMPNLQLVFLNDNLLRSLPNDAFAGTNLARLNLRNNYFLFMPVRGILEHLTSIV
QIDLHQNPWECSCDIIPLKQWLEKLSSVIVVGDVMCKTPENAFGKDLRNLEVEVICPELK
ISSGPSPVLPGGNDLTTGSSEMEEAGGRGAVPLSVLILSLLILFISAVFVAAGLYAFVLR
RRKKLPYRKRSEVDLTGIQMQCRIFEDPPRQSCSGNTCTPEKPTPNTHTHTHSGHTHAHG
HVYDYIPHPVTQMCNNPIYKPREGEIAEEDRAHFSDRKDKGSSSNSNYRTLLEKEREWTL
AVSNSQLNTIVTVNHATADMAGFHQNGGLCPTVIDSQRPTPTVGFVDCLYGTVPKLKDMH
VAHAHPPGMQYPDLQQDARLKETLLFTTGKALYPDPSQSDYLELRAKLQTKPDYLEVLEK
SYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccgatgccaatg
ctggaggactccgaggagatcgacgagccctgcttcgagccttgctactgcgaggtcaag
gagggcatcttccacgtccactgtgacagtaaaggatttacaaatgttagccagatctca
cagatatggagtcggcccttcaagctcaatctgcaaaggaactcgatgaggaagctttac
ttcaacagcttcctccatctgaacaatgccatatcacttaatctgggtaataatgccttg
caagatatccacgcaggagcgttcaatggtttgggaatactcaaacggctgttcctgcat
gaaaacaaactggaggttttccggaatgacacttttctggggttggggagtttagagtac
ctccaggcggactacaatgtaatcaaacggattgaaagtggtgcattcaggcaccttcac
aaattaagagtgctcatactaaatgacaatctgatccctgtgctaccgaattatcttttc
cggtctgtgtcgctcacacatctggacctgaggggaaacagactaaagacgttgccgtat
aaaggcatgctggagtacgttgggaggagcctaatggaaatccagctggaggagaacccc
tggaactgtgtgtgtgagattgtccagttgaaaacgtggctggagcgaatcccctacaca
gctctggttggtgagatcacatgtgagaacccgttccacttacacgggaaagacttacgg
gaaatcaagcgcagtgagctctgcccgctgctctccgatccagagatcgaggccaagctg
ggaattccccggatcccgttcagcaacgagaacacatggcctactaaaccttcctccatg
ctctcgtcctttcacaacacagcctcttctgtggaatacaaggacagagctgttaagcct
accaaacgacctcggccaacaaagaaccccccgacccctcgtagcatctacccaggcatc
aaccagccccctgtcgctggctaccaaacaaggcctcccattccaatcatttgtccagct
ggatgtacgtgcaaccttcacatcaatgacctggggctaacggtgaactgcaaagacaaa
ggcctccacaacatctcagagctcctgcctcggcctctcaatgccaagaaattatatctt
agcgggaacctaatacagaaaatctaccgttctgatttctggaacttctcaagcttggat
ttactgcatttaggaaataatcggatagcctacgtccaagagggcgcctttatcaacctg
ccaaacttgaagagtttgtacctgaatgggaacgacatcgagagactcgctcccggtatg
tttcgggggcttcagatgttgagatatctttactttgagtacaacgtcatacgtgagata
caacctaactccttctccctgatgcccaacctccagctggtcttcctcaatgacaacctg
ctgcgttccctccccaatgacgctttcgccggcaccaaccttgcacgtctcaacctgcgc
aacaactacttcctgttcatgcctgtgcgtggcattctggagcatctgacctccattgtc
cagattgacctccaccagaacccctgggaatgctcctgtgacatcatccccctcaaacag
tggctggagaagctttcttccgtcatcgtggtcggagatgtcatgtgcaagacgcccgag
aatgcttttgggaaggacctgcgtaacctggaggtggaggtcatctgtcctgagctcaag
atctcttcaggcccctctcctgtcctgcctggagggaatgacctcaccacggggagctct
gaaatggaggaggcaggtgggagaggagctgtcccactgtctgttctaatcctcagcctg
ctcatactcttcatctccgctgtgttcgtggctgccgggctttacgcctttgttctccgt
cgcaggaagaagctcccctaccggaaacgctccgaggtagacctgacggggatccagatg
cagtgccggatcttcgaggacccaccgaggcagagctgttctggcaacacctgcacaccg
gagaaaccgacacccaacacgcacacacacactcactctggtcacacacatgcccatggt
cacgtgtatgattacatcccccaccctgtgactcagatgtgcaacaaccccatctataaa
cctagagagggggaaatagctgaggaagacagggcacatttttcagataggaaagacaaa
ggcagcagtagcaacagtaactacagaaccttgttagagaaagaaagagagtggaccctg
gccgtgtcaaactctcagctcaacaccatcgtcacggtgaaccatgccacggctgacatg
gcagggtttcaccagaacggagggctctgtcccacagttattgacagccagaggccgaca
ccgacagtgggctttgtagactgtttgtatgggacagtacccaaactaaaggacatgcat
gtggcgcatgcgcacccaccaggcatgcagtacccggatttgcagcaggacgcacggctg
aaggagacattgcttttcacgacggggaaagccctctacccagacccgtcccaaagcgat
tacctcgagttaagggccaaacttcaaaccaagccggattacctcgaagtcttggaaaaa
tcttaccggttttaa
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