Pseudochaenichthys georgianus (South Georgia icefish): 117456880
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Entry
117456880 CDS
T09629
Name
(RefSeq) CD166 antigen homolog A-like isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117456880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117456880
04090 CD molecules [BR:
pgeo04090
]
117456880
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Other
117456880
CD molecules [BR:
pgeo04090
]
Proteins
117456880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
C1-set
Ig_PDGFR_d4
Syndecan
DUF6377
TMEM154
DUF6693
DUF7881_N
Motif
Other DBs
NCBI-GeneID:
117456880
NCBI-ProteinID:
XP_033952622
LinkDB
All DBs
Position
13:21466567..21504060
Genome browser
AA seq
570 aa
AA seq
DB search
MHLLSASCVCALVISVLLRQVSGLVTVIGLYGETLEIPCNYGVVNAEEDVMITKWKYDKG
EGLSGDLLVKWKDHNVSIMTTDEYRDRVSMAAKSSLLLSAAKLSDQRTFTCMVVAGVDIT
EYPVNVVIQKTPEGLEISDKAEELEIGKLTKLAKCVAKDSNPAAEITWLKNNTTLKADGK
GISIQASVLVNDVTGLSTTSSVLEYSAQKEDTDAVFTCSTKNTLAAGIVSSPVTFSITYS
TENLILQVTGQDSLVEGDSMTLKCVADGNPAPTAFNFHLKGEMVKVENADSYTITDVSRN
TTGEYKCSLVDDPTMEASKAITVNYLDINLIPSGNIVKSAGEALHPNLKIDSSGDTKVSW
TKDNVKLDKEPKFAKLTFADSGHYECEVTLGLLNQKASLELTVEGVPVITELTKKRGEDG
THEELICKAEGSPKPAVSWSINGTLIDESPFVNGKITQKIRVVPTENLTVSCTVSNELGV
ATKTINVSSIIEEVRMDKKAQTDENDQTKLVVGVVVALIVATLVLGLAYLVYVKKFKQGS
WKTGEKENGSSEEEKKLEEKVEENSQKAEV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgttgtccgccagctgtgtgtgtgccctcgtcatctccgtgcttctccgccaa
gtcagcggtttggtgacggttatcggcctgtatggggaaacactggaaatcccgtgcaac
tatggagtagtgaatgcagaggaggacgtcatgatcactaaatggaaatatgacaaagga
gagggtctttcaggagacctgctggtcaagtggaaagaccacaatgtctccatcatgacc
actgatgaatacagggaccgtgttagcatggctgcaaaatccagcctgcttctgtctgcc
gccaagctgagtgaccaacgcactttcacctgcatggtggtggctggtgtggacatcaca
gaatatccagttaatgtggtgattcagaagacgccagaaggcctggagatttctgacaaa
gcggaggaactagaaattggcaaacttacaaagctcgcaaagtgtgttgccaaggactcc
aatccagcggcagaaatcacatggctgaaaaacaacacaactctgaaagctgatggaaaa
gggatttccatccaggcctcggtgctggtgaacgatgtgactggcctttcgaccacctcc
tccgtacttgagtactctgcgcagaaggaagacacggacgccgtgttcacctgcagcacc
aagaacactctggccgcagggatcgtgtcatctccagtaacgttcagtatcacctactcc
acagagaacctcatccttcaggtcactggtcaggactctctggtggaaggagacagtatg
accctgaagtgtgttgctgatggaaacccagctccaaccgcttttaacttccaccttaag
ggagagatggtgaaagtggaaaacgctgattcttacaccatcactgatgtctctcgcaac
accactggtgaatacaaatgctctctcgttgatgacccaacaatggaagcatccaaggca
atcacagtgaactacctagacatcaacttaatcccctctggaaatatcgtcaagagtgcc
ggtgaagcattgcatccaaatctcaagattgattcctccggagacacaaaggtctcctgg
acaaaggacaatgttaaattggacaaagagcccaagtttgccaagctgacttttgctgat
tctggccactatgagtgtgaggtgacgcttgggctcctcaaccaaaaagcctctcttgag
ctgactgttgaaggtgttccggtgatcacagagctgaccaaaaagcgtggcgaagacggc
acacatgaagaactgatttgtaaggctgaaggttctccaaagccagctgtttcctggagc
atcaatggcaccctgattgatgagagtccctttgtcaatggaaagataacacaaaagatc
agagtggtgcctactgagaatctgactgtctcttgtacggtgtccaatgaacttggtgtg
gctaccaaaactataaatgtgtcatccataattgaggaggtgagaatggataaaaaagct
caaacagatgagaatgaccaaaccaagttggtggttggagttgttgtcgccctcatcgtc
gccactctagttttaggcctggcctacttggtctacgtgaagaaattcaagcaaggaagc
tggaagactggggaaaaggagaacggctcttctgaggaggagaaaaaactggaggagaaa
gtggaggagaacagccaaaaagctgaggtgtaa
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