Pseudochaenichthys georgianus (South Georgia icefish): 117457125
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Entry
117457125 CDS
T09629
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo05100
Bacterial invasion of epithelial cells
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117457125
05100 Bacterial invasion of epithelial cells
117457125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117457125
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Macropinocytosis
Others
117457125
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117457125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
RHG20_PH
PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
117457125
NCBI-ProteinID:
XP_033952895
LinkDB
All DBs
Position
13:complement(22982931..23008669)
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AA seq
970 aa
AA seq
DB search
MDIGNDVDLSNKNITPLWKRRTDNCKKKHDLRGPKPRPLSYHINGVMTTDFPLEDNGSLT
LSQPEERLTALTWGKNTAVLKHILHKPLKKSRVVRSISIGHFSTGLFSLSRFRSEESRSA
SLDNRVRNVDCGGENNSNGVTVWQEKGLQETQKRRSSPFSVFSQKDQIAFGTSPASPEEL
PINSSPVLSSRTPNNNNNNNSPSPPARRTPTPSYSSTSSIPSLSSLTSSDPPTPRSASPA
DRGQALPRQSSFSPASSHASCSSSMSSTSPSPSLSPSISPSIVLSTHSAAALKMGTQQLI
PKGLASGIRSKLPPSEPQVQGLVVLPGLDHTKRSLKALSMVETGSFFSTAAGHGEGADGE
SENPGTLNRGLRSTSYRKACVSVEDSEVPSMDPKAHRFSQPVIKWLDEDKIASPVSLTSP
ETAKPTSPGTPKLASPRILKLASLGKEKPTNTGKNKSLDRKKVLTHQRTFDSEEEEMYQN
YKEKALHNDSDEDADSREPKPDNGIVVQYRPIRTSWSQLSVVKKSGLSDKLSQEERKRQE
AIFELISSEHSYLHSLEILIRMFKNSAELREAMTKTEHHHLFSNITDVCEASKKFFKELE
ERHQQNIVINDISDIVDKHSQSNFDPFVTYCSNEVYQQRTLQRLVSKNPVFKEVLTRIES
HPDCRNLPMISFLILPMQRITRLPLLMDTICQKTPKDSAQYEDSKKALQAVSKVVRKCNE
GARTMERTEMMYTINSQLEFKIKPFPLVSSSRWMVKRGELTAFVEDNGIFLKRTSRQQVY
FFLFNDVLIVTRKKSEESYTVIDYALRDQIWVGSCQPEDLNLSPVRSTASMLSSRQAGAN
HLFRLRFRSNHSSEKVPMILGTDLLNERARWISALGQNVNNNKSQDKTYVMQVEVTRTYT
AKQPDELSLQVTDVVLVSQTVEDGWYEGERLRDGERGWFLAECAEPITCQASIERNMQRM
DRLQGLETNV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggcaatgatgtggatttgtccaataaaaacatcaccccattgtggaaacgc
cgcacagacaactgtaaaaaaaagcacgacttaagaggacccaaaccgcgaccgctcagt
taccacataaatggagttatgacaacagacttccctttggaggacaatggttcccttacc
ttgagccaacctgaggagagactcacagctctgacatggggcaagaacactgctgtgttg
aagcacattctgcacaaacccttaaaaaaatccagagttgtccgaagcattagcatcggg
cacttctcgaccggactcttttcactgtcaagatttagatctgaggaaagcagatccgcc
tcactggacaatagagttcgtaatgtagactgtggcggggaaaataacagtaatggagta
acagtatggcaggaaaagggacttcaggaaacccagaaacgcaggtccagcccgttcagt
gtgttctcacagaaagatcagatagcatttgggacaagtccagcctcacctgaagagctt
cctatcaactcttctcctgtcctgtcttcacgcactcctaacaacaacaacaacaacaac
agcccctctcctcctgcccggcgcactcccaccccttcctacagctccacttccagcatc
ccctccctttcttctctaacctcctcagacccaccgaccccacgctccgcatcgccagca
gacagaggacaagcgctcccgagacagtcctcattctcgcctgcctcctcccatgcctct
tgctcttcttccatgtcctccacctcaccctctccctcactttccccatccatctctccc
tccatcgtcctcagcacccacagtgcggctgccctgaagatgggcacccagcagctaatt
cccaagggtttagcatccggtattcggagcaagttgcctccctctgagcctcaagtccaa
ggtttggtggtgctgcctgggttggatcacaccaagcgatcattgaaagctctcagtatg
gtagaaacaggatccttcttttctactgcagcgggccatggtgaaggtgctgacggagaa
agtgagaatccagggacactaaatagaggcctgaggagtacgtcctataggaaagcttgt
gtgagtgtagaggactcagaggtcccatcgatggatccaaaagcccatcggttttcccag
cccgtcatcaaatggctggatgaggataagatagcttcacccgtcagcctcactagccct
gaaactgccaagcctacgagtcctgggactcccaaacttgccagccccaggattttaaag
cttgctagccttggaaaagaaaagcctacaaacactggaaaaaacaaaagtctagatagg
aagaaagtattgacccatcagcggacatttgacagtgaagaggaagagatgtaccagaac
tacaaggagaaggccttacacaatgattcagatgaggatgcagattctagagaaccaaaa
ccagataacggcattgtggtgcaatacagacctatacgcacctcctggagccagctgagt
gtggtcaaaaaaagtggtctttctgacaagttgagtcaagaggaacgcaaaagacaagaa
gccatctttgagttgatctcctcagagcactcttacctccacagtttggagatcctgatc
cgcatgttcaagaactccgcagagctcagagaggccatgaccaagaccgaacaccaccac
ctcttctccaacatcaccgacgtctgtgaggccagcaaaaagttttttaaggaattggag
gaaagacaccaacagaacattgtgatcaatgacatcagcgacatcgttgacaagcactca
caatccaactttgatccttttgtgacatactgctccaatgaagtctaccagcagcgaacc
ctgcagaggctggtgtccaagaatccagtttttaaggaggtgctcaccaggatagagagc
cacccagactgcaggaacctccccatgatctccttccttatcctgcctatgcagaggata
acacgtctgcccctactcatggatacaatctgtcagaagacacctaaagactcggcccaa
tatgaagactctaagaaagctttacaagctgtcagcaaggtggtaagaaagtgtaacgaa
ggagcgcgcactatggagaggacagagatgatgtacaccatcaactctcagctggagttc
aagatcaagccttttcccctggtctcatcctccaggtggatggtaaagagaggagagctg
actgcatttgttgaggataatggtatcttcctgaagcgaacgtcacggcaacaggtctat
ttcttcctcttcaatgacgtcctgatcgtcactaggaaaaagagcgaggagagctacact
gtgatcgactacgctctgagggaccagatctgggtgggatcctgccagccggaggatctc
aacctgtcaccggtcagaagcaccgccagcatgctgagctcacggcaagctggcgccaac
caccttttccgtctgcgtttccgtagcaaccactccagtgaaaaagtacccatgatcctt
gggacggatttgctgaatgagcgtgcccgatggatcagcgcactgggccaaaacgtcaac
aacaacaagagtcaggacaaaacctatgtcatgcaggtggaggtgaccagaacgtacaca
gccaagcagccagatgagttgtccctgcaggtgactgatgtggtgctggtctcgcagact
gtagaagatggctggtatgagggtgagcgactgcgtgatggagaaagggggtggttcctc
gccgagtgtgccgaaccaatcacatgccaggccagcattgagcgcaacatgcagaggatg
gatcgcctgcaggggttggaaactaacgtgtga
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