Pseudochaenichthys georgianus (South Georgia icefish): 117457128
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Entry
117457128 CDS
T09629
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117457128
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117457128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
DUF6444
Motif
Other DBs
NCBI-GeneID:
117457128
NCBI-ProteinID:
XP_033952903
LinkDB
All DBs
Position
13:complement(21548800..21570111)
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AA seq
2114 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LSADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLNEEHLSLAQQNNSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKDVQEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVLQGSVN
TSGSLCGAQQGHAAHRDPAMSSVTLTPPTSPEEAQTDYQPAQRWLKLSSASDGYSSNNTL
HGGKIPRRLASQMVESVWQEYNINRTGNKRKFTTLTNGTCEEESDKTGLWDFVECTHRPH
CNCLRHKNQKQRSSSTSGHPPSSCQPAQPALKHKLGEKLEKGDKQQKRPQTPFHHRNSVS
EEQTMEPQNQRLCLRSQDDGSYPSLHHVDTVSSKAPTLHTHPADLNGSPPPPPLSPHPCD
HAEGDMTPGGMKNSSTPIHQTFYPPSVEPCLLPQKGSEEDTRLENMPMPFPQSYNETLEP
TVFVGSAINPNEDSTHNPWKYFNLPRKKASNFLTPLLPVDKIRDDSGGGGGTENVISVTE
LMSGSMHTLKVSQELVRAYAQRRNSHYASASGDREHGDDSDPYAFVEGDEEFSFTEKKDK
SGSERDGNKKNKGDEDNGSADDGQGASGSKPTASTSLIHENDLAVSYSDLDKIFNSDEDE
LVPGSKRAGVGSEDKFGCKDSKGATLDPLSCISSADLHQMFPTPPSLEQQGYSPMNSGGK
DSLEGGAGLTLLDGSQLNNHFKMEVEEGYCSPKPSEIKDFSFVYKPETCQLLIGCSMYAP
LKMLPSQCLLPIKLPEDCVYTPSWTMGKMELIPPVTNVNLLTKDSNVPSVEPDYSQTYTP
QTHTPFMSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYDNSDL
YSPASTASTCRPVSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMN
IRGADVGVYLKDNGEAQYPCTCGFSAVTNRRFGQSAGLFLEDELDVVVRGSDASRDTERC
FEELRASTAHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYTKQSSAPSSFLRVEERD
CYNDCYMALEHGRQFMDNMSGGKVDEALVKSTCLHHWPKCKSADMSKLFSQDVLRVLLSL
QPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFV
VLSPFGLPYWEKLLLDPFGSQRDVGYVVICPENEALLRGAKTFFKDLSAMYEACQLGQHR
PICKSHPEGVLKVGATEGRSMTEQPLSDWFLKMAARDGNNEAFNRLKLFAQVCRYDLAPY
LSEQSLDSSLLSQRSPVVASPLSQTPSSSSTTSGPQSTNTTSASISSAPVNSTPPSASSG
PQTIGGMPSAKPSSYTPFGTSGLQGSSSQNGPQSNQQGAGGLAENGPSANQPQVPVEAPE
STMDRDKVGKPTDGESHALSYPPAIVVYIVDPFSYEDADRDVHSSAYTLGLLRCYMEMLQ
FLPARIRNAVSVQIVPCQYLLQPVRSGERHLYSQHLKSLAFSVFTQCRRPLPNSTNFKAL
TGFGPGLAIDMALRDPERPECLRLYTPPFILAPIKDKQTELGETFGEASQKYNVLFVGYC
LSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSVRRVGLQKLWEWCLGLVQVTS
LPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCKLCGISAADTPSILSVCLV
AMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSAMVQVNTNT
AEPIDINFNPINPDGSDGMGLFDLFDNDMVDPDLINILPNSPTTSPVHSPGSHYHQGGDG
TKGQSADRMESHEEALNILQQPMALGYFVSTAKTGPLPDWFWSACPQAQNQCPLFLKASL
HLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHF
VVLTQMYNFIMNML
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaatctcttc
tgcctggctgatttgactggaataaaatggcggcgatttgtatggcaaggacccacctca
tcgcccatccttttccctgtgaccgaggaagaccctatattgtgtagtttcagccgatgc
ctgtctgcagatgtgttgagtgtgtggagaagacaccacaccccgggtcgcagggagctc
tggcttttctggtggggggatgaccccagttttgccgagcttatccataatgagctctca
agtgaagaggatggtgagtgggagagtggcctgtcctacgagtgtagaacgcttcttttc
aaagccatccacaacctgttggagcggtgtctcatgaaccgtggctttgttcgcatcggc
aagtggtttgttaagccataccaaaaggaggagaagaccattaataaaagcgagcacctg
tcttgtgcattcacatttttcgtgcatggcgacagcaacgtgtgcacgagtgtggagatc
gctcaacatcagcctcttcagcggctgaatgaggagcatctcagcctcgcacagcagaac
aacagccctttgcaagtcatccttagcccatacggcttgaatgggaccctcaccggtcag
gctttcaagatgtcagaccaccccactcagaagctcatagaggagtggaggcagttctat
cccatcagcccaaatcccaaggacgtccaggaagataagatggaggatacagactgggag
gatgactctctggcggctgtggaggtcctcgtcgcgggagttaggatggtgtacccttcc
tgcctggtgcttctccccctgtcggaccttcctgctgtggtcctgcagggctcagtgaac
acctcaggaagcctgtgtggtgctcagcagggccacgctgctcacagagaccctgccatg
tcctctgtcacgctgactcctccaacatcaccagaggaggctcagactgattaccagcct
gctcagaggtggctgaagttgtcctctgcgtcggatggctacagctctaacaacactctt
catgggggtaaaatccctcgcaggctggccagccagatggtggagtctgtgtggcaggaa
tataacataaaccgtacagggaacaagaggaagtttaccactttaaccaatgggacctgt
gaggaggagtcggacaaaactggtctttgggattttgtggagtgtactcacaggcctcat
tgcaattgcttacgacataagaatcagaaacagcgatccagcagcacctcaggacacccg
ccttcatcctgccagcctgcccagccggccctcaagcacaagctgggcgagaagctggaa
aagggggataagcagcagaagaggccacagacgccttttcaccaccgcaactctgtgagc
gaggagcagaccatggagccgcagaaccaaaggctttgtttgagatcacaggacgacggc
tcgtatcccagtctgcaccacgtggacaccgtgtcctccaaagcccctacgctgcacaca
caccctgcagacctcaacggatccccgcctccccctccccttagcccacatccctgcgat
cacgcagaaggtgacatgactcccggcggcatgaagaactcttccacgcccattcatcaa
acgttctatccgccatcggtggagccctgtctgcttcctcagaagggctcggaggaggac
actcggctggagaacatgcctatgcctttcccccaatcctacaatgaaacattggaaccc
actgtctttgtgggttcagccattaaccccaatgaagactccacccacaacccctggaag
tatttcaacctgcccaggaagaaggcatcaaacttcctgacgcccctgttacctgtggat
aaaatacgagatgattctgggggaggtggaggaacagaaaacgtaatctccgtcacagag
ttgatgtcggggtccatgcataccctgaaggtgtcccaggagctggtcagggcctacgcc
cagcggagaaacagccattatgcctccgcatcaggtgacagagaacacggtgatgattca
gacccttacgcctttgtagagggagacgaggagttcagctttacagagaagaaggacaag
tctggctcagaaagggatggcaacaagaaaaacaagggggacgaggacaatggatcagca
gacgatggtcagggtgcatcgggcagtaaacctaccgcctccaccagccttatccacgag
aacgacttggccgtgtcatacagcgacctggataaaatcttcaattcagatgaagatgag
ctagtgcctggctccaaaagagctggagttggttcggaggacaagtttggctgtaaagac
agtaaaggagccacgttggatcctctatcttgcataagctcagcagacctgcaccagatg
tttcccaccccgccctccctggagcagcagggttactctcccatgaactccgggggcaag
gacagcctggaaggaggggcgggcctcaccctgttggacggcagccagctcaacaaccac
ttcaagatggaggtggaggagggatattgcagcccaaagccatcggaaataaaggacttc
tcctttgtatacaagccagagacgtgtcagttgttaatcggctgttccatgtacgcacca
ttgaagatgctaccaagccagtgtctgttgcctatcaaactgccagaagactgtgtgtac
acgcccagttggaccatgggcaaaatggaattgatacccccagtgacgaatgtcaatctc
ctcaccaaagacagtaacgtccccagtgtggagcccgactacagtcagacctacaccccc
cagacccacacccccttcatgtccagcagtgcccccccgagcaacagcggcaccggcatc
ctgccctccccagccacgccgcgcttctctgtgcctacgcctcgcaccccacgcactcca
cgcactccccgcggcccgtcgagtgtccagggctcccttaagtacgacaactctgacctt
tactcccctgcctctactgcctccacctgtcgacctgtcagctctgttgagccggccacc
gtaccttccatccccgaggctcacagtctctacgtcaccctcattctgtccgagtcagtc
atgaacctcttcaaggactgtaactttgacagttgctgcgtgtgtgtctgcaacatgaac
atcagaggagcagatgtaggggtgtacctcaaggacaacggcgaggcccagtacccctgc
acttgtggcttcagtgctgtcacaaatcggcgctttggccagtcggccgggttgtttctg
gaggacgagctggacgtggtggtgcgcggctcggacgccagtcgggacactgagcggtgt
ttcgaagagctgcgagcttccacggctcacaaagctggcagcctgacagagaagcctccg
gatgagctaatcctgctgctgcaggaccagtgcaccaacccttttgcccccatggcaggc
gtagaatacaccaagcagagctcagcacccagttcatttctgagggtggaagagagagac
tgttataatgactgctacatggcactggagcacggcaggcagttcatggacaatatgtca
ggaggaaaagtagatgaagcactagtgaagagcacctgtcttcatcactggccaaaatgc
aaatcagcagacatgagcaagctattctctcaggacgtcctgcgggtgttgttgtccctg
cagcctgtgctgcaggacaccattcagaagaagaggagtgtgcgctcctggggcgttcag
ggaccgctcacttggcaacagttccacaagatggctgggaggggatcatatggtaccgat
gagtctcctgagcctctgcccatccccactttcttggtcggttatgagtatgattttgtg
gtgctgtctccttttggcttgccatactgggagaagcttcttctggatccttttggttcc
cagagagacgtgggatatgttgtcatctgcccagagaatgaggctctactccgcggcgca
aagaccttcttcaaagatctgagtgctatgtatgaggcatgccagcttgggcaacacagg
cccatctgtaagagtcacccagagggcgtattgaaggtcggcgccacagaaggcaggagc
atgacggagcagccccttagtgactggttccttaagatggctgccagagacggaaacaat
gaagcttttaatcggctcaaactctttgctcaagtgtgccgctatgatctagctccatac
ctgtcagagcagtctttggatagctccctattgtctcagcgcagccctgttgtggcctct
cccttgtcccagacccccagctcttccagcaccacctcaggaccccagagcaccaacact
accagcgccagcatcagctctgccccggtcaacagcacccctccctctgcctcctcaggc
ccacagacaatcggggggatgccctcagccaagccaagctcttacacgccgtttgggacg
tcaggcctgcagggcagctcgtctcagaacggaccgcagtcaaaccaacagggggcgggg
gggttggcagaaaacggaccctcagccaaccagcctcaagtgcccgtggaggcgccagag
agcacaatggatagagacaaagtgggcaagccaacagacggagagtcccacgctttgtct
tacccgcctgccatagtggtgtatatcgtcgaccccttcagctacgaagacgccgaccga
gacgtccactccagcgcctacaccctgggactgctgcgctgctacatggagatgctccag
ttcctgcctgctcgcatcagaaacgctgtctcagtgcagattgttccctgccagtacctg
ctgcagccggtgcgcagcggggagcgccacctctacagccaacacctcaagtcgctggcc
ttctctgtgttcactcagtgtcggcggcctctgcccaactctaccaacttcaaggctctg
acgggctttggccccggccttgccatcgacatggcactaagggatccagagaggcccgaa
tgtctgcgcctgtacacgccgcccttcattttggctcctataaaagacaagcagactgag
ctcggggagacgtttggcgaggcttcccagaagtacaacgtcctgtttgtcggctactgc
ctttcccacgaccagcgctggctgctggcctcctgcaccgaccagcacggagaactgctg
gagacctgcattattagcatcgatgtacccaatagggcacgcaggaaaaagggctcagtc
aggcgggtgggtttgcagaaactgtgggagtggtgtctcggcctggtgcaggtgacatcg
ctgccatggagggtggtcatcggacggcttggtagaatgggccacggggagctgagagac
tggagtattctgctgagcaggaggaacttgcagtctctcagtaaacgcctcaaggagacg
tgcaagttgtgtggcatctctgctgctgacactcccagcatccttagcgtctgtctagtt
gcaatggagccccagggatcctttgtcatcatgccagattctgtgtcgacaggttcagtg
ttcggtcgcagcaccacgctcaacatgcagacatcgcagctgaacactcctcaggacaca
tcgtgcacacacatcctggtgttccccacctcagccatggtgcaggtcaacactaacacg
gcagagcccatcgacatcaactttaaccccataaaccccgatggatctgacggcatgggc
ctcttcgacctgttcgacaacgacatggtggatccagacctcatcaacatcttgcccaac
tcccccacaacctcccctgttcactcccccggctcccactaccaccaggggggagacgga
acaaagggccagagtgctgaccgtatggagtcccatgaggaggctctgaacatcctgcag
cagcccatggcgctgggctactttgtctccacagccaaaactggaccactgcctgactgg
ttctggtctgcctgccctcaagcccagaaccagtgccctctcttcctcaaggcctctctg
cacctgcatgtgtcttctgtccaatcagacgagctcctgcacagtaaacactcccacccc
ctcgactccaaccacacctctgatgtgctgagatttgttctagagcagtacaacgccctc
tcctggctgacgtgcgaccctgcgacccaggaccgacgctcctgtctgcccgttcacttc
gtggtgctcacacagatgtacaactttatcatgaacatgctctga
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