Pseudochaenichthys georgianus (South Georgia icefish): 117457194
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Entry
117457194 CDS
T09629
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117457194 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117457194 (snrpa)
Spliceosome [BR:
pgeo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
117457194 (snrpa)
Complex B
117457194 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
117457194
NCBI-ProteinID:
XP_033953013
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All DBs
Position
13:24312728..24316018
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AA seq
278 aa
AA seq
DB search
MAAPDVRLNHSIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNVKMKGQAFVIFK
EVNSAANALRSMQGFPFYDKPMHIQYAKMDSDIIAKMKGTFVERDRKKKEKKVKGADAAG
AKKGVPGAAAPMVAGVPAAMPGMPPMSQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMPP
GAMPPGQMMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRH
DIAFVEFETEVQAGAARDALQGFKITQANAMKISFAKK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatgtacggctcaatcattcaatctacatcaacaatttgaatgagaaa
atcaagaaagatgagttgaaaaagtcgctatacgcaatcttctcacagttcggccagatt
ctggacatcttggtggcacgaaacgtaaagatgaagggtcaggcctttgttattttcaaa
gaggtcaacagcgctgcaaatgctctaagatccatgcagggatttccgttctatgacaag
cccatgcatatccagtatgccaagatggactctgacatcatagctaaaatgaaggggact
tttgtggagcgtgaccgtaaaaagaaagagaaaaaggtcaagggagctgatgcagctgga
gctaagaagggggtaccaggagctgctgcaccgatggttgctggggtaccggctgccatg
cctggaatgccccccatgagccaggctccccgtatgatgcatatgcctggccagccgcct
tatatgccccctcctggcatgatgcctcccccggggatggctcctggtcagatgccccct
ggcgccatgcctcctggccagatgatgcctggacaaatgccacagcaggttgcagaaaat
cctcccaatcacatcctcttcctcaccaacctgccagaggagacgaacgagctcatgctc
tccatgctgttcaaccagttccccgggttcaaggaggtccgcttagtccccggtcgccac
gacatcgcctttgtggagtttgagactgaagtgcaggccggtgccgcacgagacgcactg
caaggctttaagatcacacaagcgaacgccatgaagatctcatttgctaagaaataa
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