Pseudochaenichthys georgianus (South Georgia icefish): 117457233
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Entry
117457233 CDS
T09629
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117457233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117457233
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117457233
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117457233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-B_box
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117457233
NCBI-ProteinID:
XP_033953485
LinkDB
All DBs
Position
1:6022637..6031110
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AA seq
698 aa
AA seq
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MMAAMDQSPFSLLSLEEELSCSICLCPFDCPVTIPCGHNFCQDCILASWKDSYSCPQCRT
HFPTKPELKKNTVLSTVVETFNLRSTKSEADLGTAEDSQAESQDVIRCDTCMEAEAAQTC
LTCMASFCEEHLRPHRENPTFRVHQLSEPVGDLSERICPDHHKLMELFCSQHCRPICSLC
LQLVHKGCSFMSPEEQRNLKESDLRGKLAILDEKITKNERVISHIGDMGDKLKDSATNRK
KALAADYQQIRDMLAREENEALNAVDCELQTGQTKLKDLSKKFNENVVHMSKSKEYIHSL
LSQSQTLAFLQASVNLPKAAGFDPYTPQINLDSKKVKAMQAFCADLKEHLTEMFKPPVED
RLRIRKPAMESTGPHPLSEFNNPPKQKRPPRSHSPGRPPIESLYQPVYMGCHPHYYAPQH
QQGYNRDPHFMAGQKTKPQWTGLGSQHKAGPKAKSQKPKPPKAAKDNIGQKNEERSTEHL
LDLSGIIQPRSSTPPAYLNKPEMSDIPPSITSAEKRTELLKYGTVLTLDPKTAHKRIALS
EGFTKASVSDEHTDYPDCPERFSVCSQVLTRQSFSQGRHYWEAQLSCNNFIGVGLAYRSI
DRKGPTSRLGRNDQSWCIEWFNVKLSAWHNSNETVLVNPNPQRVGVLLDCDEGTATFYNV
ADRVYPFHTFVFPYAQAVCPAFWIFSSGSSISLCKLQA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcgatggaccagagtccgttttctctgttgagtctggaggaagagctgagc
tgcagcatctgtctgtgtccctttgactgcccggtcaccatcccctgcggacacaacttc
tgccaggactgcatcctcgccagctggaaggactcctacagctgtcctcagtgtcggacc
cacttccccaccaaaccggagctgaagaaaaacactgtcctcagcaccgtcgtggagacc
ttcaacctgcggtcgaccaagagcgaggccgacctggggacagcagaggacagccaagcg
gagagccaggatgtcatacgctgtgatacatgtatggaagcggaagcggcgcagacctgc
ctcacctgcatggcctctttctgcgaggagcacctgcggcctcaccgggaaaacccaaca
tttagagtccaccagctgagtgagcctgtcggcgacctgtccgagcgcatctgcccggac
caccacaagctgatggagctcttctgcagccagcattgccgtcccatctgcagcctctgc
ctccagctggtccacaaaggctgctcctttatgtccccggaggagcagaggaacctgaaa
gagtccgacctgagaggcaagttggctatcctggacgagaaaataacgaagaacgagcga
gttatttcgcatattggtgacatgggggacaagctaaaggactcagcgaccaacaggaag
aaggccctggcagctgattatcagcagatccgggatatgttggcccgagaggagaatgaa
gctctgaatgctgtcgactgcgagctgcagactggtcagactaagcttaaggatctctca
aagaagttcaatgagaacgttgttcatatgagtaaatctaaagaatacatccacagtctg
ctgagtcagtcccagactcttgccttcctacaggcgtcagtcaacctgccaaaggctgcc
ggctttgacccttacacgcctcaaatcaacctggattctaagaaggtgaaagccatgcag
gccttttgtgcagacctgaaggagcacctgacagagatgttcaaaccgcctgttgaggac
agactgcggatacgcaaaccggcaatggaaagcactggacctcatcccttatcggagttc
aacaatcctccaaagcagaaaaggccccccaggtcccacagtccaggtcgtccccccatc
gagtcattataccagccagtttacatggggtgccatccacactactatgcaccccagcac
caacaaggctacaacagggatccccatttcatggcaggacaaaagacaaagccgcaatgg
acaggtctaggttctcaacacaaagcaggcccgaaggcgaagtctcaaaaaccaaagcct
cccaaagctgcaaaagacaatattggacaaaagaatgaagaacgctcaacagaacacctc
ttggatttaagtgggataatccaacccagaagcagtactcctccagcttatttgaataaa
ccagaaatgtcggacattccaccaagcataacatctgctgaaaaaagaaccgaacttttg
aaatatggtacagttctcactttggatccaaagacggcccacaaacgcatcgctctgagt
gagggcttcacgaaggcctcggtgtcagatgaacacacggactatcccgactgccctgag
cgcttctcggtctgctcccaggtgctcactcgtcagagtttctctcaaggccgccactac
tgggaagcgcaactgagctgcaacaacttcattggcgtaggcttggcttacagaagcatt
gaccgcaaaggtcccaccagtcgactgggccgcaacgaccagtcctggtgtatcgagtgg
ttcaacgtcaagctgtccgcttggcacaacagcaatgagaccgtgctggtcaatcccaat
ccacagcgcgtaggcgtgctgttggattgtgacgagggcactgctacgttctataacgtg
gcagacagggtgtatcccttccacacctttgtgttcccctatgcccaagctgtgtgtcca
gctttctggattttctcaagtggctcgtccatttctttgtgcaagcttcaggcatga
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