Pseudochaenichthys georgianus (South Georgia icefish): 117457238
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Entry
117457238 CDS
T09629
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117457238 (trpc4b)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117457238 (trpc4b)
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_3
Ank
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
117457238
NCBI-ProteinID:
XP_033953083
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Position
13:16507281..16516466
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AA seq
855 aa
AA seq
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MSQLYYQTHDNSSYRDRIPLRIVRAESELSALEKAYLGAVEKGDYASLKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNVYLGDALLHAIRKEVVGAVELLLNHKK
PRGEKKVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELGELSTVENEFKSE
YEELSHTCKQFAKDLLDQTRSSKELEIILNYRDDIDPLLDDSTNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLLSIFYLFSPKCSYGLFIR
KPFIKFICHTASYMTFLFLLLLASQHIASGQKDFQGPPPTTVEWMILPWVLGFIWTEVKQ
MWDSGFKDYIDDWWNLMDFIMNSLYLATISLKMVAYAKYSGQKPRDTWEMWHPTLIAESL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YVDESLPCYGVRCPQQNNAFSTLFQTLQSLFWSIFGLISLHVTNVKPDHKFTEFVGSTMF
GTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNILP
SPKSVFYLCGWIKTHFFKRTSIKRRETFETLGRRAADNVRLNHGYQGVLKNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKLQGEGVTGNVLGSTLAYPGNCFIY
SPKFPNDEPEQKLSLFDITVPTLKSAAATPSITVGSNSTANGSVVPRSRLPSLTCDEIYS
LSGEDILGTDGQNQG
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattaccaaacacatgacaactcttcatacagggaccgcatccccctg
cggattgtacgggcagagtctgagctctccgccctagagaaggcctacctgggggctgtg
gagaagggggattatgccagtttgaaacaagccctggaagaggctgagatctacttcagg
atcaacatcaactgtatcgacccgctgggccgcacagctctgctcattgccattgaaaat
gagaacctggagatcattgagctgctgctcagctataacgtatatctgggggatgccctg
ttgcatgccatccgcaaagaagtggtgggggctgtggagctgctgctgaaccataagaag
ccacgtggggaaaaaaaggtcccaccaattcttctggacaaacagttttcagacttcacc
ccggacatcactccaatcatccttgccgcccacaccaacaactatgagatcattaaactg
cttgttcagcgaggtgtttccatacctcagccacatgctgtgcgctgcaactgtgtagag
tgtgtctccagttcggatgtggacagcctacgtcactcacgctcgcgcctcaacatctac
aaggcccttgccagcccgtctctcatcgccctctccagcgaggatcctttccttacagct
tttcaactcagctgggagcttggggagcttagcacagtggagaatgagttcaagtcagag
tacgaggagctgtcccatacgtgtaaacaatttgcaaaggacctcttggaccagacccgc
agttctaaagagttggaaataatactcaactaccgtgatgacatcgaccccctgctggac
gacagcacaaatgatctggcccgactcaagctggctatcaaatattgccagaaagagttt
gttgctcagcccaactgtcagcagctgctggcatctcggtggtatgatgagttcccaggc
tggaggaggcggcactgggcaggaaaactcatcacgtgtatcttcattggcctcctcttc
ccactgttatccatcttctacttgttctctccaaagtgcagttatggcttattcattcgg
aagcccttcatcaagttcatctgtcacactgcttcctacatgaccttcctcttcctgctc
cttctggcctcgcagcatatagcttctgggcagaaggactttcaaggcccaccacccacc
acggtggaatggatgatcctaccctgggtgcttggctttatatggacggaggtaaaacag
atgtgggatagtggtttcaaagactacattgatgactggtggaacttaatggacttcatt
atgaactccttgtatcttgcaacaatttccctgaaaatggttgcctatgcaaagtacagt
gggcaaaaacccagagacacctgggaaatgtggcacccgactttgatagcagagtcattg
tttgccatcgctaacatcttcagctccttgcgcctcatctgccttttcactgccaactct
caccttggccccttacagatctcactgggccgcatgctcctggacatcctcaagtttctc
ttcatctattgtctggtgctgttagcctttgccaatggcctcaaccagctgtacttttat
tatgtagatgagagtttgccatgctacggcgttcgctgtcctcagcaaaacaacgcattc
tcaacgctgttccagacgctgcagtcattattttggtcgatatttggcttaatttccctc
catgttaccaatgtgaaaccagaccataaattcactgagttcgtgggctccaccatgttt
ggcacgtacaatgtcatttccctggtagtgcttttaaatatgctaattgccatgatgaac
aactcctaccagcacattgctgatcatgccgatatagagtggaaatttgcaagaacaaaa
ttatggatgagctattttgaagaagggggaactctgccttctccttttaatatattaccc
agcccaaagtcggttttttatctatgtggatggattaagacacatttcttcaagagaaca
agcataaaaaggcgtgaaacattcgaaactctggggagacgtgcagccgataatgtaaga
ttaaaccatggatatcagggggttttgaagaacctagtgaagcggtatgtggccgcaatg
atcagagatgcaaagacagaggaagggctgacagaggagaactttaaggagcttaagcag
gacatctccagcttccgctatgaagtccttggaatgatgaagggtaaacttcaaggtgag
ggggtcacaggtaacgttctaggctccaccttggcttatcctggaaattgtttcatatat
tctcccaaattccctaatgatgagccagaacagaagctgagcctgtttgacatcaccgtg
cccaccctgaagagcgcagcggccaccccctccatcactgtgggctctaacagtacagcc
aatggttcggttgtcccacgcagcagactcccctctctgacatgtgatgaaatatactca
ttgtccggggaagatatattgggaactgatggacaaaaccaaggatga
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