Pseudochaenichthys georgianus (South Georgia icefish): 117457270
Help
Entry
117457270 CDS
T09629
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117457270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117457270
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117457270
Protein recycling
Other Rab GTPase associated proteins
117457270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
117457270
NCBI-ProteinID:
XP_033953130
LinkDB
All DBs
Position
13:complement(24046001..24053462)
Genome browser
AA seq
505 aa
AA seq
DB search
MMSQRRGIHLDQSELLCTKGCGFYGNTGWQGLCSKCWREENQREKQNQIKEDWALAERLQ
KEEEEAYTSRNQKAQSQPTITPFGKFVERKTKEKSSKVNTVTKFFSPSSKTPPKKDSPFD
AHSSPSPSSSTSRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMAADE
LSECVQDFYQNLSDRLHTQFKGSSDHVESVMDEVEKYMMTRLYKEVFCPETTDDEKKDLA
IQKRIRALHWVTIEMLCVPVEEEIAEVSDSVVKAITDVIEMDSKRVPKEKLSCITRCSKH
IFNAIKISKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFSNPSRLMTGEDGYYFT
NLCCAVAFIEKLDGQSLNLSSEEFDHYMSGQASPCWPQPGGASSSSPGSAALSQVHKGLD
LLTGLGQRQERVLEDARQLESDLIDWTDEVEQKVQNVLESFPLETETPAPPTASGTAVSA
ASAIDSDNVENELLPPPLTPQVFAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtgggatccatctggaccaatcagagctgctttgcacaaaagga
tgtggtttttatggcaacactggctggcagggcctgtgctcaaagtgctggcgagaggag
aatcaacgagaaaagcaaaatcagattaaagaagactgggcacttgctgaaaggctgcaa
aaagaggaagaggaagcatacacaagcagaaatcaaaaggcccaatcacagcctaccatc
acaccctttggcaagttcgtggaaagaaaaactaaggaaaagtccagcaaagtcaacaca
gttacaaagtttttttctccctcctcaaaaacaccaccaaaaaaagattctccttttgat
gctcactccagcccaagccccagctcctccacaagccggcactcctctgtggacagtgac
catgcgacgagagagttcattgatttcctcaagcctctgaagtctggcagggagatcttc
aaacagtgccgggccttcactgagagcatggtctataagcgtgacatggcagctgatgag
ctgtcagagtgtgtgcaggatttctaccagaatctctcagaccgcctccacacccaattc
aaaggttcatcagatcatgtagagagtgttatggatgaagtagagaagtacatgatgact
cgtctttacaaagaagtcttctgtcctgagactacagacgatgagaagaaagaccttgcc
attcagaagagaatcagagccttgcattgggtcaccattgagatgctgtgtgttcctgta
gaagaggaaatcgctgaggtgtccgacagtgtagtcaaagccatcacagatgtgattgaa
atggattcaaagcgcgtgcccaaagagaagctgtcgtgcatcactcgctgcagcaagcac
atcttcaacgccatcaaaatcagcaaaaaagaggctgcgtctgcggatgacttcctcccc
acgctcatctacattgtgctgaaagcaaaccctccaagactgcagtccaacatccagtac
atcacccgcttcagcaaccccagcagactgatgacgggagaggatggttactacttcact
aatctgtgctgtgcggtggccttcatcgagaagctggacggccagtctctgaacctgagc
tctgaggagtttgaccactacatgtcgggccaggcctccccctgctggccacagccgggc
ggagcgtcctccagctccccgggcagcgccgctctcagtcaggtccacaaggggctggac
ctgctcactgggctggggcagaggcaggagagggtcctggaggacgcccgccagctggag
agcgacctcatcgactggacggatgaagtggagcagaaggtgcagaacgttctggagagc
tttcccctagagacagaaacccctgctcctcccacagcgagtgggacggctgtttcagcg
gcgtcagccatcgactctgataacgtggagaatgagctcctgccccccccgctgacaccg
caagtctttgctggttga
DBGET
integrated database retrieval system
