Pseudochaenichthys georgianus (South Georgia icefish): 117457332
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Entry
117457332 CDS
T09629
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117457332 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117457332 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117457332 (farsb)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117457332 (farsb)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117457332 (farsb)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117457332 (farsb)
Prokaryotic type
117457332 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
GST_C_6
GST_C_3
Motif
Other DBs
NCBI-GeneID:
117457332
NCBI-ProteinID:
XP_033953239
LinkDB
All DBs
Position
13:complement(41917500..41947163)
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AA seq
833 aa
AA seq
DB search
MPTVGVKRDLLFKALGKTYTDVEFDELCFEYGLELDEITSEKEIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPLSGEPQRLIITEETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTVSGPFTYTAKPPA
EISFKPLNQTQEYTATQLMSLYKTDSHLRHYLHIIEDKPLYPVIYDSNGIVLSMPPIING
DHSKITLKTKNVFVECTATDLTKAKIVLDMMVTMFSEYCSHPFTVEEAEVLYPDGKTCTY
PELAYRKEKLSSDFVNRKVGINESTETIARLLTKMCLRSEVTGVGDEIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPYTTPRTYTVANQFPLNKLTELLRQDLAAAGFTEALNFALCS
AEDISDKLGKKISETRAVHIANPKTAEFQVARTTLLPGLLKTLAANRKMPLPLKLFEISD
VVLKDDTKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKSERGDGYHIQAAED
STFFPGRCAEIFVGGKSVGRLGVLHPDVITRFELTMPCSAVEMDIEPFLGHPAETTLTHD
VPLHEVIKHHFLSQVLNSRPTSTKTVFGDVSSAAGLKALDDFLADKSYMEGFEATQADTT
MFDAIPSAPSSTFPHLLRWYNHVKSFLRERANLPSSKSQFVLEEDDDDIDLFGSDDEEDS
AEVEKLKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMAKMEECVRSVKMEGLLW
GQSKMVPVGYGIKKLQIGCVVEDEKVGTDLLEEAITAFEEYVQSVDVAAFNKV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaagagggatcttctgttcaaagctttgggcaaaacatacact
gatgtagagtttgacgagctgtgctttgagtatgggctggagctggatgaaattacctca
gagaaggagataatcagccgagagcagggcgactccaaggcttcgggagcgtccgacgtc
atcctgtataagatcgatgttcccgccaaccgctacgacctgctgtgtctggaggggctc
gtccgaggactgcaggtcttcaagaacaagttggaggcgcctcgctacagacgcgtcagc
ccgctcagtggggagcctcagaggctcatcatcacagaggagacggcggcggtgcgaccc
cacgctgtggccgctgtgttgaggaacatcaccttcactcaggagcgctacgacagcttc
atcgagctgcaggagaagctccaccagaacatctgcaggaagaggagcctggtggccatc
gggactcacgacctggacaccgtctccggtccgttcacgtacaccgccaaaccccccgca
gaaatcagcttcaaacccctgaaccagacccaagagtacaccgccacccagctcatgagc
ctctacaagacagacagccacctgagacattacctccacatcatcgaagacaagccgctg
taccccgtcatctacgacagcaacggtatcgtcctctccatgccccccatcatcaacggt
gaccattcgaaaatcaccctgaagacgaagaacgtgtttgtggagtgcacggcgacagac
ctgactaaggcgaagatcgtgttggacatgatggtgaccatgttcagcgagtattgttca
caccctttcacggtcgaggaggcggaggtgctgtacccagacggaaagacctgcacatac
ccagagttggcctaccggaaggagaagctgtccagcgacttcgtcaaccggaaagtcggc
atcaacgagtccacggagacgatcgctcggctgctgacgaagatgtgtctccgctccgag
gtcacgggggtcggcgacgagatcgaggtcgagatcccgcccacgcgctcagacgtgatt
cacgcctgtgacatcatggaggacgccgccatggcgtacggcttcaacaacatcccctac
accacgccacgcacatacaccgtggccaatcagttccctctgaataaactgacggagctg
ttgagacaggacctggcagcggctggcttcactgaggctctcaacttcgccctgtgctcc
gcagaagatatatcagacaagctggggaagaaaatctccgagacgagagcggttcacatc
gccaaccccaagacggcggagttccaggtggcgcgcaccaccctgctgcccggcctgctg
aagaccctggctgccaacaggaagatgcccctccccctcaaactgttcgagatctctgac
gtggtgctgaaggacgacaccaaagatgtgggtgcgaggaacagccggcgcttctgtgcc
gtttactacaacaagagcccgggtttcgaggtgatccacggcctgctggaccgcacgatg
cagctgctggaggtgaagtcagagcgaggagacgggtaccacatccaggccgctgaggat
tccaccttcttccccggccgctgcgccgagatcttcgtgggtgggaagagcgtcggacgt
ctcggcgttcttcacccggacgtcatcacccgcttcgagctcacgatgccctgctccgcc
gtggagatggacatcgagcccttccttggccaccctgcggaaaccacgctcacgcacgac
gtcccgctgcacgaagtcatcaaacaccacttcctgtcgcaagtcctcaactcccgtcca
acttctaccaagacggtgttcggcgacgtgagttctgccgccggtctgaaggctctcgat
gattttctggcggataaaagctacatggagggttttgaggcgactcaagccgacacgacg
atgttcgacgccatcccgtccgccccttcttcgactttcccccaccttttacgctggtac
aaccacgtcaagtccttcctgagggaacgagccaacctcccgtcctcgaaaagtcaattc
gtcctcgaagaagacgacgatgacatcgatctttttggctcggacgacgaagaagacagc
gccgaagtggagaaacttaaagagcagcgtctcgccgaatacgccgcaaagaaatccaag
aaaccagctctcatcgccaagtcgtccatcttgttggacgtgaagccgtgggacgacgag
acggacatggcgaagatggaggagtgtgtgcgcagcgtcaaaatggagggccttctgtgg
gggcaatccaagatggtgcccgtgggatacggcatcaagaagctgcagatagggtgcgtg
gtggaggacgagaaagtgggcacggatctgctggaggaggccatcaccgccttcgaggag
tacgttcagagtgtggatgtggccgccttcaacaaggtctga
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