KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117457381
Entry
117457381         CDS       T09629                                 
Symbol
mre11a
Name
(RefSeq) double-strand break repair protein MRE11
  KO
K10865  double-strand break repair protein MRE11
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03440  Homologous recombination
pgeo03450  Non-homologous end-joining
pgeo04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    117457381 (mre11a)
   03450 Non-homologous end-joining
    117457381 (mre11a)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117457381 (mre11a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgeo03032]
    117457381 (mre11a)
   03400 DNA repair and recombination proteins [BR:pgeo03400]
    117457381 (mre11a)
DNA replication proteins [BR:pgeo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    117457381 (mre11a)
DNA repair and recombination proteins [BR:pgeo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     117457381 (mre11a)
    BRCA1-C complex
     117457381 (mre11a)
   NHEJ (non-homologous end-joining)
    MRX complex
     117457381 (mre11a)
SSDB
Motif
Pfam: Mre11_DNA_bind Metallophos
Other DBs
NCBI-GeneID: 117457381
NCBI-ProteinID: XP_033953329
LinkDB
Position
13:complement(25923099..25929925)
AA seq 688 aa
MSSESTLDDEDTFKILIATDIHLGYLEKDAIRGNDSFNTLEEILKCAKTNQVDFILLGGD
LFHENKPSRRCLHTCITMLRRYCMGDKPINFNILSDQKVNFNTTHFPWVNYQDENLNISI
PAFSIHGNHDDPTGAEGLCALDLISASGLVNHFGHSHSVEKIEISPILMQKGITKLALFG
LGSIPDERLYRMFVNKQVTMLRPKEDQDEWFNLFTIHQNRSKHGPTNYIPEQFLDDFIDL
VVWGHEHECLIAPTRNEQQLFYVTQPGSSVATSLSPGEAAKKHIGLLRVKGRKMNMQKIP
LNTVRQFFIQDVVLADYQDIFTPDTPQVTKKVEDLCYAKVTEMLEQAERERLGCPLTPEK
PLIRLRVDYSGGFEAFNTSRFSQKFVDRVANPKDVIHFLRRREQKEDNKDEVNVDYGKLL
KTTAVEGLRVEDLVKQYFEATEQNVQLSLLTEHGMGKAIQEFVDKDEKDAIEELITYQLE
KTQRHLQARGVTTEQDIDLEIQRFRDSKKNTTEEENEIKEAINRAKAHRLERGEMPVDMS
VDLALESDEDAASLAPPTRGKGRGARGWGSRGRGRGAAASEPKPAGRGRAQKSSAATQSR
SIMQAFQSPSQRSSRPGANKSYADEMTIEDSDEDILVMKTTRPPPRPASSSSSFTKLSSQ
SQSTKGVAFDDSDDEEDDPFKGPSRSRR
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgtcctcagagagcacgttggatgatgaggatacttttaagatccttattgctacagat
attcacctcggttacctcgagaaggatgctatccgtggcaatgactcttttaacacactg
gaagaaatcttaaaatgtgccaagacaaatcaggtggatttcatcctgctgggtggtgat
ttgttccatgagaacaagccgtcacgacgatgcctccacacctgcatcacgatgcttaga
cgatactgcatgggagacaaacccataaacttcaacattctcagtgaccagaaggtcaac
tttaacacaacccattttccatgggttaactatcaggatgaaaacctgaacatctctatt
cctgcgttcagcattcacggtaatcatgatgacccaactggggctgaaggcttgtgtgcg
ttggatctgataagtgcgtctggtcttgtcaatcactttggtcattcccattcagtggaa
aagatagagattagtcccatcctcatgcagaaaggaatcaccaagctagccctattcggt
cttggctcgatcccagatgagcgcttgtacaggatgttcgttaacaaacaggtaaccatg
cttcgccccaaagaagaccaagatgagtggtttaatctcttcaccatccaccagaacagg
agtaagcacggtcccactaactacatccctgagcagttcctggatgactttattgacttg
gtggtgtggggccacgagcatgagtgtttgattgctccaaccaggaatgaacagcagctc
ttctatgtgacacagcctggcagctctgtagccacctctctgtcccctggagaggcagcc
aagaaacacatagggctgctgagggtgaagggtcgtaagatgaacatgcaaaagatcccc
ctcaacacggtgcgtcagttcttcatccaagacgtggtgctggctgactaccaagacatc
tttacaccggacacaccccaggtcacaaagaaggtggaggacttgtgctatgcaaaggtc
acagagatgttggaacaagccgaaagagagaggcttggttgtccgctcacaccagagaaa
cctcttattcgcctgagggtggactacagcggaggctttgaggcgttcaacacttctcgc
ttcagtcagaagtttgtggaccgtgttgccaacccaaaagacgtcatccactttctcagg
cgccgtgaacagaaggaggataacaaagatgaggtcaatgtggattacggcaaactgtta
aaaaccacagcagttgagggtctgagggtggaggatctggtgaaacagtactttgaggca
accgaacagaacgtgcagctgtccctcctgaccgagcacggcatggggaaggcaattcag
gagtttgtggacaaagatgagaaagacgccattgaggagctgatcacctaccagttagag
aagacacagcgccacctccaagccagaggagtaaccacggagcaggacatagacctggag
atccaacgattcagagactccaaaaagaacaccacagaggaagagaatgaaatcaaagaa
gctatcaacagagctaaagctcaccgtttggagcgtggggagatgcctgtagatatgtct
gttgatcttgctttggaatctgatgaagacgcggcctcattagctcccccaacgcgaggc
aaagggcgaggagcgagggggtgggggagccggggaaggggcagaggtgcagctgcctcc
gaaccaaagccagctggtcggggccgtgcccagaaatcttcagcagcaacccaaagcagg
agtatcatgcaagcatttcaatctccatcccaaagatcatctcgacctggagccaacaaa
tcctatgcagatgaaatgaccatcgaggactcagatgaggatattcttgtaatgaaaaca
acccgccctcctccgagaccagcatcatcgtcttcatctttcaccaagttgagctctcag
agccagtcaactaaaggagttgcatttgacgacagtgatgatgaagaggatgacccattc
aaaggccccagtcgttcacggagataa

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