Pseudochaenichthys georgianus (South Georgia icefish): 117457411
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Entry
117457411 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117457411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117457411
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117457411
Intermediate filaments
Intermediate filament-binding proteins
117457411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SLATT_6
CAMSAP_CH
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
117457411
NCBI-ProteinID:
XP_033953385
LinkDB
All DBs
Position
13:complement(2270555..2420663)
Genome browser
AA seq
2709 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EHNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDSCIEAE
NIVNRYDALASDLLDWIEKTIAVLSNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISEINKAWERLEKAEHEGASLRKELIRQEKLEL
LAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVVV
ELGAEMEAEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLAMQKTFQDMVYMID
WMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADITVQAERVETLNTAALKFTTIEGYQP
CDPQVICNRVNHVSSCLEELRQLAAKRREELEESRQLWAFFQELEESEAWIREKSSILSA
QGYGKDSEQCAEAAAEAQTLAGELLAHRSLLQVTTMKRGKQILSEKSSARRGSRERIMEV
KSEWKSLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEACGQHRMHVLALRKHMVALPLRSRDQEEVQARMGEVEQLYTEVVEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSIEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECTEIKSQIQDKRKAIDATQYMGSDLGGVMALQRRLSTMEGALSVLEPKLLHLQEEAEHM
ANAHPIRAMEVLVPFDGISVEWEELKRTLQGCEDSLTVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESDEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSDRIKERIDTLASRGNQNRE
QAQQWLEKMNDQWELQRFLQDCLELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSQVVRMKLEEIRECWQELESTTQAKARQLFESNKA
DLLVQSYESMDQKLGQLEVQLAYVDQGQDLTTVNKQLKKLHTMESQMEEWYKEVGQLQAQ
VASIPQQTKIKETVAERQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLDDEILWVQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIDDVLERAGIIASIRSPEADSA
RAGHEQLAGLWALLWHETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLDQTIEDYAETIGLLSQQCRQLLEMGHPDYEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTDF
ASETGSVGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSSANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIAFREHEVMQCWKELLTSCEECRVQITTETDKLRFFSSVR
DQITWMESIICQIGTGEKPKDVSSVEVLMNYHQSLKSEVEARSRSTLECIEMGKTLLAAR
NPAAEEIKEKLDKVITKQYELSEKWDNHWDALQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRITTVEKLRAEQSPLPPTPLLGRK
VFLDPQDASATVAILPRLPLSPVMRQTIYEQNEANSPPSPSPATPTPSPSSVARRLGSTV
ANYTPVMNGSSYRQSLEARQGGVVGLAAGLGQPTPFSIASVATAAMLVSANQARESPSPA
REQAAKGMSYLQPSQAERSPEVKSSPYLRQPKIKHLDDAVTPLLVASRLERARERERGRE
REIMMGEIGTEKAEVAVMAEVVLTEPGRERLHSEPTRGPRGSRTDPLGHAEPQVHTHGQH
RIERQLSSEQLIQARRDELPQEVWREQAERRDRKTLERQTSSEQEGPVAPGGHEGRRRER
DRHRLDRQESSEHDTGKEQSDRRSGGGEKRSTMAEIVEQLQEREAAQARGEVARLPNGVP
EKITKQSLERPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPSIPLQPTHTAHHEGFL
FRKLDIETLKKSTNSRSWVNLYCVLKEGEMGFYKDAKNMATSYNNEPLLNLSHCHCDVTN
GYKKKKNVFTLKTKDGSEFLFHAKDEDDLKVWVGNITASITEHEEIAKWGQPQPTTSSTD
EGTRRDGSKADNRSERGGERSDRGDRIEPADIEKDKERDKEKERGERSERSERGGKSEAK
RSEKSGKKK
NT seq
8130 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgccgaagcccagcgccagctcaacaacaac
aaccgcccaagcagctcgggattctgggagacggagtgtaccagctccaagctgttcgag
tgctcccgcatcaaggccctggcagatgaacgagatgcggtccagaagaagactttcacc
aagtgggttaactcccatctggccagagtgtcctgtcgcatagctgacctctacaacgac
ctgcgggatggatacatgctcaccaggctgctggaggtcctcagtggagagctgctgccg
aggcctacgcggggtcgaatgcggatccactgcctggagaacgttgacaaagccctgcag
ttcctgaaagaacagcgggtgcacctggagaacgtgggctcccatgacattgtggatgga
aaccaccgcctcaccctgggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacggaggacaacagagaaacccgctctgccaaggatgccttgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacagacctgatctgatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagctttcaacatcgct
gagcataacctgggcctcaccaaactcctggatcctgaggacgtgaacacagagaaccca
gatgagaagtccatcatcacctatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtgctagacagttgtattgaagcagag
aacatcgtgaaccgctacgatgccctggcctcagacctgctggactggatagagaagacc
atcgcggtcctcagcaaccagaagttcgccaactctctgaccggagtccagcagcagctg
caggccttcaccacctactgcaccatcgagaagcccatcaagtttcaggagaaggggaat
ctagaagttcttctgttcaccatccagagcaagctccgagccaacaaccagaaaccctac
gtgcctcatgacgggaagctcatctcagagatcaacaaggcctgggagaggctggagaag
gccgaacacgagggggcgtctctgcgtaaggagctgattcgtcaggagaagctggagcta
ctggctcagtgcttcgaccacaaaaccaccatgagacaagcctggctcaacgagaaccag
aggctcgtgtcgcaggacaattttggctatgacctgccagcagtggaggcggcgatgaag
aaacacgaggccatcgaggcggacatagcctcgtatgaagagcggattggcgtggtggtg
gagctcggagcagagatggaggcagaaggatactacgacatccggcgtatcctggcacgg
aaggagaacatcctgggacagtggagcctgctgaaggagctggtggctgggaggaggacc
cggctggagaagaacctagccatgcagaagacctttcaggacatggtctacatgatcgac
tggatggaggacacacaggtccagctgctgtccaaggactttgggaagcatcttctggag
gtggacgacctgctgcagaagcacagcctgcaggaggccgacatcacggtgcaggcggag
agggtggagactctgaacacggctgctctcaaattcaccaccatagagggttaccaacca
tgtgacccacaggtgatctgtaaccgtgtcaaccatgtgtcttcctgtctggaggagctg
agacagctggcagctaaaagacgtgaagagctggaggagtccagacagctgtgggccttc
tttcaggagctggaggagtcggaggcctggatcagggagaagagctccatcctgagtgct
caaggctacgggaaggactctgagcagtgtgctgaagctgctgcagaagcacaaacgctg
gctggagagctgctggctcaccgctcgctgctgcaggtaaccaccatgaagcgaggaaag
cagatcctgagtgagaagagctcggcacggcggggatccagggagcgcatcatggaggtg
aagagcgagtggaagagcctggaggaccaggccgcgcagcgtctgggccacctgcaggag
gcgctcaactttttccagttctccacggagacagacgacctggtggcgtggctgcaggac
gcttaccgcctggtgtccagcgaagactttggacacgacgagtactccacccagtcgctt
ctgaagaaacacagaggggtcagcgaggcctgtggacaacaccgcatgcacgtgctggca
ctgcggaaacacatggtggcgctgcctctgcgctcccgcgaccaggaggaggtgcaggcg
cgcatgggggaggtggagcagctgtacacggaggtggtggaggtggcggtgctcagacag
cagtggctccacgacgccctcgccgtctaccgcatgttcagcgaggtcaatgcctgcgag
ctgtggatcgatgagaaggagcagtggttggacaagatggagatcccagagaggctggag
gacgtggagatggtggctcacaggtttgaaagcctggaccaagagatgaacagcctgatg
ggaaggattctggacgttaaccagatcgttcagcagctcctggatggaggtcatccgtcc
tccatagaggtcagaggatgtcaggaccaccttaactccaggtggaacagcattgtggag
ctggtggagcagaagaaggatcagctggactccatgctccgcctgcagaactacctgctg
gagtgtaccgagatcaagtcccagatccaggataagaggaaagccatcgacgccacccag
tacatgggcagtgacctggggggggtcatggctctgcagagacgactctccaccatggag
ggagctctgtctgtcctggagcccaaactactgcatctgcaggaagaggcggagcacatg
gccaacgcccatcccatccgggctatggaggttctggtaccgtttgatggcatcagtgtg
gagtgggaggagcttaaacgcaccctgcagggctgcgaggactcactgaccgtggccagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggttcagacacag
acagccgccgcctcagaccagctgcccaacaacctggaggaggccgagaaactcatcaac
aaacacgctgcacttaaggaggaaatcggaagatatgaagaggactacgagcggctgcag
gccatgaacgagctgctggagtccgatgaggcccccctcccccaggccgccctgcagcag
tggctccagaagctcgatgtgggctggaacaaactgctggagatgtgggagagcaggagg
gaagttctggtgcaggctcacattttccatctgttcctgcgagatgtcaaacaggccgag
tccttcctcaacaaccaggagtcggccctggctcacgtggagctgcccaccaccgtggaa
acggtggaagcggccataaagaaacacaaggacttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaagccggggagagtctgatcagccagaacaacatctac
tctgatcgcatcaaggagcgcatcgacaccctcgccagcaggggaaaccagaacagagag
caggcccagcagtggctggagaagatgaacgaccagtgggagctgcagaggtttctgcag
gactgtctggagctgggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcacaagaagtggcttaagcaccaggccttcatggccgag
ctggcccagaataaggaatggctggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagccaggtggtgcggatgaagctggaggagatcagggagtgctgg
caggagctggagagcaccacgcaggccaaagcccggcagctctttgagtccaacaaggcc
gacctgctggtgcagagctacgagagcatggaccagaagctgggccagctggaggtccag
ctagcctacgtggaccagggacaggacctcaccactgtcaacaagcagctcaagaaacta
cacacgatggagagccagatggaggagtggtataaggaggtggggcagctccaggcgcag
gtggcctccatcccacagcagacaaagatcaaggagacggttgcagagcgacaagcagtg
gtggaggcgcggatggtgcgactgatcgagccgctgaaggagaggcggcggatcctgctg
gcctccaaagaagttcaccaagtgggacgagacctggacgatgagatcttgtgggtccag
gagcgcctcccgatggccatgtctcaggagcacggctcctctctgcaggcggtgcagcag
ctcatgaagaagaaccagactcttcagagggagctgcagggccacaggagcaggatcgat
gatgtcctggagagggcggggatcatcgcctccatccgcagccccgaggcggacagcgcc
cgggcgggccacgagcagctggccgggctgtgggctctgctgtggcacgagacggagagg
aggcagctggtgctggacgccatgtaccaggcccaacagtactacttcgacacggccgag
gtggaggcctggctgagcgagcaggagttgcacatgatgaacgaggagaaggggaaggac
gagccgagcacgctgcagctgctgaagaaacacctggtcctggatcagaccatcgaggac
tacgctgagaccatcggcctgctctcacagcagtgtcgacagctgctggagatgggccat
ccggactacgagcaaatcagcaagcgccagtcgcagatcgaccgtctgtacgtgtccctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctc
aacagggaggtggacgagctggagcagtggatcgctcagagggaggtggtggccagctcg
cctgaactgggtcaagactacgagcatgtcacggtcctgcaggagaagttcacagacttt
gcttcagagacgggcagcgtgggacaggagcgagtgaccgccgtcaaccagatggtggac
gagctgatcgactacggccacgcggaggccgccaccatcgctgagtggaaggacggggtg
aacgaggcctgggccgatctgctggagctgatggagacccgggcgcaaatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggttttggcccagattgaggac
aaacatcggaggcttcctgaagttcgggctcggcagggcagctctgccaacaccagcacg
ctgcagagactgctgcacagcttcgagcaggacatacagctgctggtcacgcaggtgcgt
cagctgcaggagagcgcggctcagctgaggacggtgtacgccggggagaaggccgaagcc
atcgccttccgcgagcacgaagtgatgcagtgctggaaggagttgctcacgtcctgcgag
gagtgccgagtacagatcaccacggagaccgacaagctgaggttcttcagctcggtccga
gatcagatcacttggatggaatccatcatctgccagatagggacaggagaaaagcctaag
gacgtgtcctcagtggaggtgctgatgaactatcaccagagtctgaagagtgaggtggag
gctcgcagccgcagcactctggagtgcatcgagatggggaaaactctgctggctgctcga
aacccggcagctgaggagatcaaggagaagctagacaaggtaatcaccaagcagtacgag
ctgtctgagaagtgggacaaccactgggatgccctacagcaattgttggaggttcaccag
tttgcgcaggaggctgtggtggcggaggcgtggctgaccgctcaggagccgctcatcagc
agcaacgagctgggggcgagcgtagacgaggtggagcagctgattcgtcggcatgaagcc
ttccgcaaagctgctgccacctgggaggagcgattcagctcactgagacgaatcaccacg
gtggaaaagttgagagcagagcagagtccgctgcccccgacccctctgctgggtcgtaaa
gtcttcctggacccccaagatgcctcagcaactgtagccatcctcccccgcctcccgctc
tcccccgtcatgagacagaccatctatgagcagaacgaagccaattctcctccctcaccc
tcacccgccacacctacaccctccccctcatctgtggcccgtcggctggggtccaccgtg
gctaactacacccccgtgatgaacggctccagctaccgccaaagcctggaggcgcggcag
ggcggcgtggtgggtttggctgcaggactaggccagcccacccctttctccatcgcctcg
gttgccacggcagccatgcttgtctcagccaatcaggcgagagagagccccagcccggcg
agagagcaagccgcgaaggggatgagttacctccagccatcacaggcggaaagatctcca
gaggtgaagtcgtccccgtatctaaggcaacccaaaatcaaacacctggatgatgcagtg
acgccgctgctcgtggccagccgcctggagagggcgagggagcgggaaagggggagggag
agggagataatgatgggagagatagggacggagaaagcggaggtggctgtgatggctgag
gtggtgcttacggagccgggccgggagcgcctgcacagcgagcccaccagagggccccgg
gggtccagaactgacccgctgggccacgctgagcctcaggtccacacacacggtcagcac
aggatagagcggcagctgtccagcgagcagctgatccaggcccgcagggacgagctgcct
caggaggtgtggagggaacaggccgagaggcgggacaggaagacgcttgagaggcaaacg
tccagtgagcaggagggccccgtggcccccgggggccacgagggccggcggagagagagg
gaccgacaccggctggacagacaagaatccagcgagcatgacaccggcaaagagcaatct
gaccgacgctcaggaggaggagaaaagagatctaccatggcagagattgtagagcagctg
caggagagagaagcagcacaggcccgtggagaggtggcccgcctgcctaatggtgtccca
gagaaaataaccaaacagtcactggagcgacctcgagctcgggacagacccaaaccacgg
cgccgaccacgacccaaagaggcgggagagaccacccggaggtcccggtccgctccggcc
cagagcagcccgagcatccccctgcagcccacgcacactgcacaccacgagggcttcctg
ttccgcaagctggacatcgagaccctgaagaagagtaccaatagcaggtcttgggtcaac
ctgtactgcgtgctgaaagaaggggagatgggtttctacaaagacgccaagaacatggcc
acgtcctacaacaacgagccgctgctcaacctgtcccactgccactgcgacgtcaccaac
ggctacaagaagaagaagaacgtcttcacgctcaaaacgaaggacggcagtgagtttttg
tttcatgcgaaagatgaggacgacctcaaggtttgggtgggcaacatcacggccagcatc
acggagcacgaggagattgccaaatggggtcagccccaaccaactacctcatccaccgac
gagggcacgcggcgcgacggcagcaaggcggacaaccggtcagagcgtgggggggagcgc
tcggaccggggagaccgcatcgagccggcggatattgaaaaggacaaagagagagacaag
gagaaggagaggggggagcggtcagagaggtcggagcgaggcgggaagtcggaagcaaag
cgctcggaaaagtccggtaagaaaaagtga
DBGET
integrated database retrieval system
