Pseudochaenichthys georgianus (South Georgia icefish): 117457450
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Entry
117457450 CDS
T09629
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117457450 (vps53)
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Others
EARP complex
117457450 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
117457450 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
hAT-like_RNase-H
Syndetin_C
GrpE
Laminin_II
Sec8_N
COG5_N
VPS51_Exo84_N
PsaD
NBD94
Motif
Other DBs
NCBI-GeneID:
117457450
NCBI-ProteinID:
XP_033953443
LinkDB
All DBs
Position
13:complement(28792375..28816151)
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AA seq
830 aa
AA seq
DB search
MMEEEEFELAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDTLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEESFPSQGSKRQGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWSMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDIPGKKRPESPLESTNPFLDDDAGEDVGADKDEDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKDGPEA
AKFTMDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNS
IQLIVQDIDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRENLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADSGPSLFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaattggctgaggacttggaggctattctgcatctcacc
ccagaggtgcaactagccattgaacaggttttccccagccaggacccactggacagagca
gacttcaatgctgtggaatacatcaacaccctattcccgaccgaacagtcattggctaat
attgatgatgtggtaaacaagattcgtctgaagatccggcgcctggatgacaacatcagg
acagtggtgagaggccagaccaacgtgggtcaggatggcagacaggctttggaagaggcc
caaattgccatccagcagctctttggaaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtcaaggagattacgagagacataaagcagttggaccatgccaagcgc
cacctaactacatccatcaccaccctcaaccacctgcacatgttggcaggaggcgtcgac
actttagaagccatgaccagaaagaggcagtatggtgaggtggccaacctgctgcaggga
gtggtcaatgtgcttgaacatttccacaagtacatgggcataccccagatcagacagcta
tctgagagagtaaaagcagcacagagtgagttggggactcagatcctggcagattttgaa
gaatccttcccctctcaaggctccaagagacaaggtggtcccagtaatgtgttgagagat
gcctgtctggtggccaatgtgctggatccacgcatcaaacaggagattatcaaaaagttt
atcaggcagcacctctcagagtacctggtattattccaggaaaaccaagatgttgcatgg
ctagacaagatcgatcggcgctacgcctggatcaaacggcagctcgtggactacgaggag
aagtacggacgcatgtttcctgaggagtggagcatgactgagcgcattgctgtggagttc
tgccacatcaccagggtggagcttgccaaagtgatgcgaacacgggctaaggagattgag
gtgaagctgcttctgtttgctattcagaggaccacaaacttcgagggtcttctggccaaa
cgcttcactggatgcaccttgactgacatacccggaaaaaagaggccagagagtcctctc
gaatctactaaccccttcctggatgacgacgcgggtgaggatgtgggcgcagataaggac
gaggatctagctaagcccagaaagccaaaagcgccggacaaccctttccatggtatcgtc
tccaagtgctttgaacctcatctatacgtctacatagaatcccaagacaagaacctgggc
gaactgattgaccgttttgtggctgactttcgagcgcaaggcccacccaaggctggcacg
gaggagggcggagccgtgctgcccagctgtgcggacctctttgtctattacaagaagtgc
atggtgcagtgctcacaactgagcaccggggaaccaatgatcgctctcacaaccatcttc
cagaaattcctcagagagtacgcttggaagatcctctctggcaaccttcctaaatccagc
agtaacagtggaggtcttaccataagcagtctgctgaaggagaaggacgggccggaggct
gcaaagttcaccatggacgagctgtgcctgatctgtagcatccttagcactgcagagtac
tgcctggctaccacacaacagttggaggagaaactgaaggaaaaagtcgataaagtccta
gtggagagaattaatttgactggggagatggatactttcagcactgtcatctcaaacagc
atccagctcatcgttcaagatattgatgctgcctgtgaccctgctctcactgctatgagc
aagatgccgtggcagagtgtggagcacgtgggagaccagagtccttatgtgacctcaatt
atcatgcacattaagcagaatgtgcccatcatcagagaaaacctggcctccacacgcaaa
tacttcacacagttctgcatcaaattcacaaactctttcattcccaaattcatcaaccac
ctgttcagatgtaagcctatcagcatggttggagctgaacaacttctccttgacactcac
tccttgaagacagtcttgctggatttgccctccattggctcccaggtgctccgcaaggcc
cctgccagctacactaagatagtggtgaaaggcatgacccgagcagagatgatcctaaag
gtggtgatggccccacatgaaccaccagtggtgtttgttgacaactacatcaagctcctg
gctgacggaaatcctgagaccttccagaagatcctggacatgaagggtctgaagcgcagt
gaacagagcagcatgctggagctattcaggcagaggctacccactccgccatcaggggcc
gacagtggcccctctctattcagtgcccccaccccagagcaagagtcttcccgcatccgc
aaactggagaaactcatcaagaaaagattgtga
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