Pseudochaenichthys georgianus (South Georgia icefish): 117457497
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Entry
117457497 CDS
T09629
Symbol
rsf1a
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117457497 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117457497 (rsf1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117457497 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
Motif
Other DBs
NCBI-GeneID:
117457497
NCBI-ProteinID:
XP_033953524
LinkDB
All DBs
Position
13:855222..874000
Genome browser
AA seq
1430 aa
AA seq
DB search
MAAPVLLRSSGPPLCPSFAEVCSFLERYGAVLDLPEMTFQQMERYLRDTTTVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQELSMECKSCILKYLCECQF
DDNLKFKMAINEEDPEKMRLQPIGRDQQGLMYWLQLDPEQSIRLYTEEQDDLDGSTWKCI
VRNRTDLAEALELLKGQVEPKQSQDQDQDQDQDLDRSASPTQTGAGGEAVGGTKTPEEHT
DSGGGGPVKAEEQLTEVMQPEHSQPGSTEVKDERTEHTPSPVFDNRVSTITTVIKSESRD
TDNPKNAVSVVMAPGATVTKQEVNKEEEVERAVVTRSEQAKIPLKKRELKLAESFSNHLK
NNSSSSIIVCNPSVIQAKAPPPLAXQQQLLATASSQELSNGRAPLPPPHKEGHNGVIGVI
GQVGVIGHVGVIRSPLERHRATGAEQQELNGPSSDQRGGEDREVSRQSVLVRKGAAEGET
MTAAPAAMDTQTTRNQPLPSLKCVPLPDAAESPSSLPLPPEDPQGHTAEDQGQHVTEEQL
HRQRKAGHSSEEGEEGGSVSGCPVGEGGSKDAQEEKSTLAKVEAAPESISPTLGTVDQEE
QQGGGGNGGTAAQVRAKDTGQGPLEEASSELQKEGIRLKIKIPPHRRSKLRGKGGKEGQK
ERGGEEVQDEGMMLRRSSRICRSSALPSCRPSCKAADSQRKKPQDTQALSSRVREEGGEE
EEEEEEEEEEEEEEQQQSSTTKKEGEKEPVGQMRKRRGKRRHRRARWSNIRVKRRKLNEE
EEVEARGRKQGEEVEDPGRQRGEGESEEGSDSEELCKSEELPSEDACSHCGLPNHPELIL
LCDSCDSGYHTACLRPPLMLIPDGQWFCPPCQHKLLCEKLEEHLLNLDSALKKRERAERR
RERLVYVGISVENIIPEGDEVEEEKTTKKKDPKKSKHLGRRSTRTRKHISYRFDDFDDAI
DEAIDEDIRDLCGGARRGRNLTAILSEEGKESQRPIRGQAHAARNRKRRRLNDLESDSTA
AESEDEFMLSNSSEEEEFGASGPDDDEEQDEDAGSDVGSLDIGSRSKRAARGAPKPRPGK
TQRRGRKRLRRRRRRSSEEEEETEEEMGSDQFSDMTDSDDDKNRRGLRRGQRQQVNYRET
SESSDASRASAKKVGVRPRGRPCKEHLSSDYSDVTPSSRDSEEDNYKDLDDDDRRRRANK
RRREEEDRLRKRTRGRPRRNQNEEDERERGRRLKRKRLEKEKDRGKRVKGTSREEEDLEK
MGRGRRREILSQQRRKRLAQMLKKRRPSTDEEEDEDEDSESESSSEEDRPVRKRLNRIDS
DDEEEDGEEEETMKKCSEVERRTDSDTQEKRRGRSLSPSNRHRTPRGPEEPGAEGPAAPR
DRAEPGCHNGPSHQEGEGEEKEEGQEKEEGEEKEEGEGQTLNSVQNSPQS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggtgctgctgagaagctccggcccgccgctctgcccgagcttcgcggag
gtctgttcgttcctggagcggtacggagcagtgctggacctgcccgagatgactttccag
cagatggagaggtatctgcgggacacaacgacagttcctaaacccctggtggagctccac
gtgaagctgctcagaaaactggggaggtctgtgaccactgaccgctgggagaaatacctg
gctaaggtgtgccaggagctgaacagcacctgggcctgggagctggaacagaagggctac
caggagttgtccatggagtgcaagtcatgcatcctaaaatatctctgcgagtgtcagttt
gatgacaacctgaagttcaagatggcgatcaatgaggaggacccggagaagatgcgcctc
cagccaataggccgggaccagcagggcctgatgtactggctgcagctggaccctgagcag
agcatccgcctgtacacggaggagcaggacgacctggacggctccacctggaagtgcatc
gtcaggaaccgcaccgacctggcggaggctttggagctgctaaagggccaggttgaaccc
aaacagagtcaggaccaggaccaggaccaggaccaggacctggataggagcgccagcccc
acacagacaggtgcagggggtgaggctgttggaggcaccaagaccccagaggagcacact
gacagtgggggggggggacctgtaaaggcagaggaacagctaacggaagtgatgcagccg
gagcacagccagccggggagcaccgaggtgaaggacgagaggacggaacacacaccatca
cctgtctttgacaaccgcgtgagcaccataaccaccgtcatcaaatcagaatccagggac
actgacaatccaaaaaatgctgtgtcggttgtcatggcaccaggtgcgactgtgacaaag
caggaagtgaacaaggaggaggaagtggagcgggctgtggtcactcgcagcgagcaggcc
aagataccactgaagaagagggagctgaagctggcggagagcttcagtaaccacctgaag
aacaacagcagcagcagcatcatcgtgtgcaacccctccgtcatccaggccaaggccccc
ccccccctcgcanngcagcagcagctcctggccacggcatcaagtcaagaactgagcaac
ggaagggcccctctgcccccgccccacaaagagggtcacaatggagtcattggggtcata
ggtcaggtcggcgttataggccatgtaggagtcatccgcagcccgctggagcgccataga
gccaccggggccgagcaacaggaactaaacgggcccagttcagaccagcgggggggggaa
gacagggaggtgagccggcagtcagtgctggtgaggaagggggctgccgagggggagacg
atgacagctgctcctgctgccatggacacgcagacaaccaggaaccagccgctgccatcc
ctgaaatgtgttcctctgcctgacgctgcagagagcccctcctcactgcccctgccccca
gaggaccctcagggacacactgcagaggaccagggtcaacacgtcactgaggagcagctc
cacaggcagaggaaggctggacacagcagtgaggagggggaggagggggggagtgtgtcc
ggatgccctgtgggagaagggggaagtaaagatgcccaggaagagaaaagcactttggca
aaggtggaggccgctccagagagcatctctccaacgcttggaacagttgaccaggaggag
cagcagggaggggggggcaatggtgggacggctgcgcaggtcagggcgaaggacactggg
cagggtcccctggaggaagcctcctctgagctccagaaagaaggaatcaggctgaagatc
aagatccccccccatcgcaggagcaagctaagggggaaggggggaaaggaggggcagaaa
gagagggggggggaggaggtgcaagatgaagggatgatgctcaggaggtcctccaggatc
tgcagatcgtctgctctgccgagctgcaggccgagctgcaaggctgctgacagccagagg
aagaagcctcaagacacacaggccctctccagcagagtgagggaggaggggggggaggag
gaggaggaggaggaggaggaggaggaggaagaagaagaggagcagcagcagagctcgacg
acaaagaaagagggggagaaggaacctgttgggcagatgaggaagcgacggggtaagcgg
aggcaccggcgcgcccgctggtccaacatccgggttaagagacgcaaactgaacgaggaa
gaggaggtggaggcccgagggaggaaacaaggagaggaggtggaggacccagggaggcaa
cgaggagagggggagagtgaagaagggagtgattctgaagaattgtgtaaatcagaggag
cttcccagtgaggacgcctgcagccactgcggactgcccaaccacccggaactgatcctg
ctgtgtgactcctgtgacagtgggtaccacaccgcttgtctgcggccgccgctcatgttg
attccagacggacagtggttctgtccaccctgccaacataagctgctgtgtgagaagctg
gaggagcacctgctgaacctggacagtgctctgaagaaaagagagagagcggagaggagg
agggagcgtctggtgtacgtggggatcagtgtggagaacatcatacctgagggcgatgag
gtggaagaggagaagaccaccaagaagaaagatcccaagaagagcaaacatctggggagg
aggtccaccagaaccaggaagcacatcagctacaggtttgatgattttgatgacgccatc
gatgaggctatagatgaggacatcagggacctctgtgggggagcacggcggggtagaaac
ctcacggccatcctatcagaggaagggaaggagagccagcggccaatcagaggccaggct
cacgctgccaggaacaggaagaggcggagactgaacgacctggagagcgacagcacggca
gctgagagtgaagacgagttcatgctcagcaacagctcagaggaagaggagtttggtgcg
tcagggcctgatgatgacgaggagcaagatgaagatgccggcagcgatgtaggcagctta
gacatcgggtcgcgttctaaacgggcagcgaggggggcacctaagccccgccctggaaag
acccagcggcggggcaggaagcggctcagacggcgacgaagacgctcctctgaggaagag
gaggagactgaggaagagatgggctctgatcagttcagcgacatgactgacagcgacgat
gacaaaaataggcggggcctgaggcggggccagcgtcagcaggtaaactatcgcgagacg
tccgagtcctccgacgcctcccgggcctccgccaagaaggtgggggtccgaccccgtggc
agaccttgcaaggagcatctctccagcgactacagcgacgtcacaccgtcttccagagac
tcagaggaggacaattataaagacctagatgatgatgacaggagacgaagagcgaacaag
aggagaagagaggaggaagaccgcctgaggaagaggacgagaggaaggccgaggagaaac
cagaacgaggaggatgagagggagcgagggaggcggctgaaaaggaaacggttagagaag
gagaaggacagagggaagagggtgaaggggacgagcagagaagaggaggacctggagaag
atgggtcgggggaggaggagggagatcctgtcccagcagagacgcaagcgcctcgctcag
atgctgaagaagaggagaccttctactgacgaagaggaggatgaggacgaagattctgag
tctgagtcttcatcagaggaggatcgtccagtccgcaaaagactcaaccgcattgactct
gatgatgaagaggaagacggggaggaggaagagacgatgaagaagtgttcagaggtggag
aggaggaccgacagtgacactcaggaaaagaggaggggtcggagcctgtccccttcaaac
agacatcggacccccaggggcccagaggagccgggggccgagggtcctgctgcacccaga
gacagagcagagcccggctgccacaacgggccctcgcatcaggagggggagggggaggaa
aaggaggaggggcaggaaaaggaggagggggaggaaaaggaggagggggagggccagaca
ttaaactctgtccagaacagtccgcagtcatga
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