Pseudochaenichthys georgianus (South Georgia icefish): 117457509
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Entry
117457509 CDS
T09629
Symbol
vmp1
Name
(RefSeq) vacuole membrane protein 1 isoform X2
KO
K21248
vacuole membrane protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117457509 (vmp1)
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Gene cluster
GFIT
Motif
Pfam:
VTT_dom
Wzz
Motif
Other DBs
NCBI-GeneID:
117457509
NCBI-ProteinID:
XP_033953538
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Position
13:36974945..37002900
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AA seq
409 aa
AA seq
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MAANGAKCEQPQKRAGAKGKQNGKAIGRFFTLSVRERRQRDKEERLSLVVWRRPVTTIHY
FLLETLIKLKEWTFQLWQRRGLVSLVLVLCSLFSFAYSTEGSHQQWVSYLEKRFLWCAYW
VGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECSSTDFPEPPYPDQIVCPQGGGLEG
SISLFSIMSKVRLEACMWGAGTAIGELPPYFMARAARQSGADPEDEDYEEFEEMLEQAEG
AQGLVTRAKLGVQHMVQKVGFFGILACASIPNPLFDLAGITCGHFMVPFWTFFGATLIGK
AVIKMHIQKLFVIITFSKHIVEQMVSLIGAVPRVGPSLQKPFSQYLEAQRNKLHHAGGSA
PADENWLSWVFEKVVLVMVCYFVSSIINSMAQSYAKRLQQQRHSEEKTK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaatggagcaaagtgtgagcagccacagaaacgggccggagccaaaggcaaa
cagaatggcaaagcaataggtaggttttttactctttcagttagagagaggcgacagagg
gataaggaggagcgcctgtctctggtggtttggaggaggcccgtcaccacaatacattac
ttccttctggagaccctcatcaagctaaaggagtggacgtttcagctttggcagcgacga
ggcctggtgtccttagttctggtgttatgttctctgttctccttcgcctactccacggag
ggctcacaccaacaatgggttagctacctggagaagaggtttctatggtgtgcgtactgg
gtgggtctcgggatcctgtcctcagtgggcctcgggaccggcctgcacacgtttctgctc
tatctgggtcctcacatagcatcagtgactctggcagcgtacgagtgcagctccacagac
ttccccgagcctccgtacccggaccagatcgtctgtcctcagggcggggggctggaggga
agcatctccctcttctcaatcatgtccaaggtccgcctggaggcctgcatgtggggtgca
ggcaccgccatcggagagctgcctccgtacttcatggcccgagccgctcggcagtctgga
gccgacccagaggacgaagactacgaggagtttgaggagatgctggagcaggccgagggc
gctcagggtttggtcacaagagcaaaactgggagttcagcatatggtgcagaaagttgga
tttttcgggatcttggcttgcgcctctatccccaatcctctgttcgaccttgctggaatt
acttgcggtcatttcatggtgcccttctggaccttctttggagccactctgattgggaaa
gccgtcatcaagatgcatatacagaaactttttgttatcattaccttcagcaagcacata
gtggagcagatggtgtcactcattggggctgtgcccagagtggggccctcgctgcagaag
cccttcagtcagtacctggaggcccagaggaacaagctgcaccacgccggagggagtgca
ccagcggatgagaactggctgtcgtgggtgtttgagaaggtggtgctcgtcatggtctgc
tacttcgtctcctccatcattaactccatggctcagagctacgccaagcggctgcagcag
cagaggcactcagaagagaagaccaagtga
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