Pseudochaenichthys georgianus (South Georgia icefish): 117457603
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Entry
117457603 CDS
T09629
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117457603
03041 Spliceosome [BR:
pgeo03041
]
117457603
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117457603
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
117457603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117457603
NCBI-ProteinID:
XP_033953646
LinkDB
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Position
13:complement(16135484..16167188)
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AA seq
761 aa
AA seq
DB search
MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVEKDVFGPRFLKNFTDTFLNLYHCSEDDKTKILRVLNLWEKN
GVFEMDIIQPLMDMCNETIVPAPTLQVAAHPQPETHLPVTSASVVSAVPQLTSPDALAAV
AQLFQSPHGLELQRMLQNFQQADKTREASITNSLPNAAQPMPVAQLNPYNEHTENRNSLA
EKLLDRFDYDDEPEDMIAKEDSAQTQGIPGLVFNHFPGQIPNTDTVHPHMTGQIGGVEHG
GGLSHDEHHMTIDGYRSINEGYSQTRGSSREDSSMRREGRHRGYGRRSRSRSGSRSPKRR
RSRSSSRSRRPRHRRSTSRSKEQHLRSRSGSQDRNEREKDRERRQKGLPSIKSQTLSVCS
TTLWVGQLDKKTQQPDVMSLLEEFGQIDSINMIPPRGCAYIAMVHRQDANTALTKLSRGS
YKVNQKPVKIAWALNKGIKSAHKKFWDVEHGVTYIPWNKVKVDELETYREGGMLDVETLN
TEWNYGKDINNKAAVNGDLESVPADGTVTAHIQVPPVLQAAPITSPPAFPGPIMLSPTGP
PVGAPFIPTEFDPTKLAPGNGKPPEESTMDSKGDKGEPSDLGADIKLGSPTAPVMTLPGP
GVMQGPRPGMPPMQPPPGMPNHHLPPFLSPPNMPPMPPHMMPGGPMFPQNRFRMHMPFPP
RGPPFHRPPPMGPEGMNDTEGRHFRNGRAGFGCPPFIRGRW
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaacgcgttcaacatggagctgttttccatgattgacatgaagcctcca
atatcccgtgcaaagatgatgtctgtaacaaaatcagccatcaaagccatcaagctttac
aaacatgttgtgcagattgttgaaaagttcatcaagaagtgcaagccagaattaaaagtc
cctggcttgtacgtggtggattccattgttcgacagtcgcgtcatcagtttggagttgag
aaggatgtgtttgggcccagattcttgaagaacttcacagataccttcctaaacctttac
cactgctcagaagatgataagaccaaaatccttcgcgtactgaacctgtgggaaaagaat
ggtgtgttcgagatggacatcattcagcctctgatggatatgtgcaatgaaaccattgtt
cctgcccctacactacaagttgccgctcacccacaaccagagacacaccttcccgtcact
agtgcctcagttgtgtctgctgtgcctcagctaacctctcctgatgccttagctgctgtg
gcccagttatttcagtccccccatggtctagagctgcagaggatgcttcagaacttccag
caggcagataagacccgggaagcgtccatcacaaacagcttaccaaacgcagcacagccc
atgccagtggcccagctcaacccgtacaatgaacacactgaaaatagaaactctttagct
gagaaactcctggacagatttgactatgacgatgaacctgaggatatgatcgccaaagaa
gacagtgcccagacgcaaggcatccctggacttgtgttcaaccattttcctggccagatt
cccaacacagatactgttcatccacatatgacgggacagatcggtggtgtagagcatggt
ggagggttgagtcatgatgaacatcatatgacgatcgatggataccgttccataaatgag
ggttattcacaaacaaggggaagttcaagagaagactcatctatgaggcgggagggcaga
cacagaggctatggcaggagatcaagatccagatctggctcaagatctcccaagagaaga
agatcaagatcttcatcccgctcaagaaggccaaggcaccggcgctctacctctcgctcc
aaagaacagcacttgagatctcgctctggttctcaagacaggaatgaaagagagaaggac
agagagcgcagacagaaaggccttcccagcataaagagccagacactcagtgtttgcagc
actacactttgggtgggacagctggataagaaaactcagcagcccgatgtgatgtccctt
ttggaagagtttggccagatcgactccatcaatatgattcctccaaggggttgtgcctat
attgctatggttcacagacaagatgccaatacagcattgaccaaactcagcaggggctca
tacaaagtcaatcagaaacctgtaaagattgcttgggctttgaacaaaggtattaaatca
gcacacaaaaagttctgggatgttgaacatggagttacctacatcccatggaataaagtc
aaagttgacgagttggagacctatcgggaaggagggatgctggacgtggagacactaaat
acagagtggaattatggcaaggacatcaataacaaggcagctgtaaatggagacttggag
agtgtcccagcagatggaaccgtcactgctcacattcaggtgccaccagttctacaggca
gcacccataacaagtccacctgctttccctggccccatcatgctgtcccctacggggcct
ccagtcggagctccattcatccccacagagtttgatcctacaaagttggcaccaggaaat
ggaaaacctccagaggagtccaccatggattctaaaggagacaaaggcgaaccctcagat
ctgggcgcagacatcaagctggggtcccctactgcaccagtgatgaccttaccaggccca
ggagtcatgcaggggcccagaccgggtatgccccctatgcagcctcctcctgggatgccg
aatcatcatctacctccattcctctcacccccaaacatgccacccatgcccccacatatg
atgcctggaggacccatgtttccacagaataggttcagaatgcatatgccgtttcctcct
cgtggtcctcctttccatcgacctccgcctatggggccagagggcatgaatgacactgag
gggaggcatttccgaaacgggagggcagggtttgggtgcccccccttcatcagagggagg
tggtag
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