Pseudochaenichthys georgianus (South Georgia icefish): 117457717
Help
Entry
117457717 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAM-like
KO
K06767
Down syndrome cell adhesion molecule
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117457717
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
DSCAM family
117457717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
fn3_2
C2-set_3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
117457717
NCBI-ProteinID:
XP_033953824
LinkDB
All DBs
Position
13:complement(36713499..36866475)
Genome browser
AA seq
2068 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVNVVSWEKDTVSLNSGQRYLITSTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDHREVTINH
RVELPCKASGYPTPKYRWLKDNSPLEPDNRFRQTITGLLIESTQPSDSGTYVCEVWNSYG
NAEVMGRLYIKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRESLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILASFSEKVVNP
NEPVFLVCNVKGTPPPRCTWSLDDDPVIKDSHHHLGHYETHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGLVYHQARINVRGRANIRPMKNITAIAGRDAFIHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLTNVQQVDAGEYNCKVMVQPNKMDSQSVHLCVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRISNLTP
DHNGNYTCVARNEAAAVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPIPLNSGSRVTLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATRGEEKKMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVVSTLVIMPTVRGDSGFFSCHAINSFGEDRGIIQLTVQEAPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVLLEPTSPQSIKVSWKPPQKHLQNGVIRG
YQVGYREYSPGGSHQFTILSLDTSGDTMESIMLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVVKTLEDVPSRSPENVLAVAKAPEVISLSWMPLSRDDLNGNLQGYRVIYWANLPDGELG
EIRNVTTNQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
AASGSVVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDAYFYRIPNLARNRQYS
IWVVAVTAAGHGNNSDKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPTIK
WIKGNTNGTPTLVLVDGRRSVHGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGHISEIIEAKTHGKEPQFAKDHELFTSINSTRARLNLV
GWNNGGCPITSFILEYRAVDLATWTTAQRTSLTKSYVLYDLQEATWYELQMKVTNSAGSA
EKRITFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTLTSALVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAK
AGPAATRSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTD
SVASSTPSESGICRFTASPPKPQDVSRVMTMAVPKAHRPAGELVHLPPYLRMDFLLNRGV
PPRGGGVSCSSGSSIGAGGGGGGGGXGGGSGASGETRGVGGGAMGQTCLEPQRSRTLKRP
PPMEPTPMEVPSPREVQQWQPGTASTLPHRDARERGEARGEVRADAPSSGDLAQAQAAKL
STSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttttccagagcatcttgaatgttttcagtgaggaccta
cattccagcttatactttgtcaatgcatctttgcaagaggtagtatttgccagcaccaca
gggacctctgtgccctgtcctgctggtggcgcgccccctgcctcgctacgctggtatctg
gcgaccggcgaggagatctacgatgtccccggcatccgccacgtccaccccaatggaacc
ctccagatcttcaacttcctgccatccagcttcagcaagctgatccacgacaacacgtac
tactgcactgccgagaacccctccggcaagatcaggagtcaggatgtccacatcaaagct
gtatcacgggaaccctacacagtccgagtggccgaccagaaggccatgagaggcagtgta
gccgtcttcaagtgcattatccctgcttctgttgaggcctacgtcaatgttgtatcatgg
gagaaagacaccgtttcactcaactcagggcaaagatatctcatcacatccacaggagcc
ttgtatattctggacgtcctgcctgaggatgggctgaataactaccgctgcacgacccgc
caccggtacaccggcgagacgcgccagagcaacagcgcccgtctcatcgtgtcagacccc
accaatgctgagccgggcatcctggatggctttgaccacagagaggtgacgatcaatcac
cgggtggagctgccctgtaaggcctcaggctacccaacgcccaaataccgctggctgaag
gacaacagccctctggagcccgacaaccgcttcagacagaccatcaccgggctgctgatc
gagagcacgcagcccagtgactccgggacgtatgtctgcgaagtgtggaacagctacggc
aacgctgaggtcatggggcgcctgtacatcaaacagcccctgaaggcggtggtcagcccc
cggaaggtgaaaggcagcgtgggtagcaaggtgtctctgtcctgcagcgtgagcggatca
gacgagtacgagctgtcgtggtaccgcaacggggagatcatctaccccggcaacaacgtg
cgcttcaccgggctcaaccgggagagcctcatcatggagggcatgtccaagagcgacggg
ggggcgtaccagtgcttcgccaggaaaggcaagatgtccgcacaggacttcgtgcaagtc
atcctcgaagatggtacgccaaagatcctggcctcgttcagcgagaaggtggtgaacccc
aacgagcccgtcttcctggtctgcaacgtgaagggcacgcctcccccccgctgcacctgg
tctctggacgacgaccccgtcatcaaggactcccaccaccacctgggccactacgagacc
cacgagggccacgtggtcagccagctgaacgtcacgcacacccaggtgcaggacgggggg
gtgtaccggtgcacgtgcagcaactcggccgggctcgtgtaccaccaggctcgaataaac
gtaagaggccgagccaacatccgcccgatgaaaaacatcacggcgatcgctggacgagac
gcgttcattcactgccgtgtgattggctacccttactactctataaagtggtacaagaac
tctgcactgctgccgttcaaccaccggcagcgagcgttcgagaacaacggcacgctgaag
ctgaccaacgtgcagcaagtggatgccggcgagtacaactgcaaagtgatggtgcaaccc
aacaagatggactcccagagcgtgcacctgtgcgtcagagtccctccctacatccagccc
tttgagttccagcgcttcaccatcgggcagcgcgtcttcatcccctgtgtggtcatgtcg
ggcgaccgccctctggacatcacctggcagaaggacgggcgtcccatccccatcagcctg
ggcgtaaccgtggacaacatcgacttcaccagctcgctgcgcatctccaacctgacgccc
gaccacaacggaaactacacctgcgtcgcccgcaacgaggcggctgccgtggagcaccag
agtcagctcattgtgagagttccccctcagtttgtggtgcagcctgaggatcaggacggg
atctacgggaagactgtgactctgaactgctcggctgaaggataccctccacccaccatc
gtatgggaacactccaaaggtgcgggtgtccctcagttccagcccatccctctgaacagc
ggctctcgagtgacgctgctgagcaacggctctctgctgatcaaacacgtgctggaggac
gacagcggcttctacctgtgtaaggtcagcaacgacgtgggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaatcccggccatgatcacctcctacccgaacaccaccctggcg
acgcggggcgaggagaagaagatgagctgcatcgctcacggggagaaacccatcatggtg
cgctgggagaaagaagagcgcatcatcaacccggagaccagccgatacgtggtcaccgtc
aaggaggtggccgacgaggtcgtctccacgctggtgattatgccgactgttcgtggggac
tcaggtttcttctcctgtcacgccatcaactctttcggggaggaccgaggcatcatacag
ctgacagtgcaagaagcccccgaccctccggaggtggagatccgggaggtgaaggaccgg
accatcgctctgcgctggaccatgggcttcgatgggaacagccccatcacaggatatgat
atcgaatgcaagaacaaatcagcgtcatggctatcagcccaggttaccaaagatgtttcc
cctcagctcaaccaggccactatcatcgacctccacccttcgtccacctacaacatccgc
atggtcgccaagaacatcatcggcaacagtaaccccagcaacgagctcaccatcaccact
gatgaagcagctcctgacggccccccacaggatgtccttctggagcccacctccccacag
agcatcaaagtttcctggaagcctccacagaagcaccttcagaacggggtgatccgcggc
taccaggtgggctacagggagtacagcccgggggggagccaccagttcaccatcctcagc
ctggacaccagcggagacaccatggagagcatcatgctggacaacctgaagaagttcact
cagtacagcgtggtggtgcaggcggccaacagggcgggcaccgggccgtcctctcagcag
gtcgtcgtcaaaaccctggaggacgttccctctcgctcccctgaaaacgtcctggctgtg
gcgaaggcccccgaggtgatctctctctcctggatgcctctatccagagacgatctcaac
gggaacctgcagggatacagagtcatctactgggccaacctgcccgacggagagcttggg
gagatcaggaatgtgacgaccaatcagccgtctctggagctggacgggttggagaagtac
accaactacagcatccaggtgttagccttcaccaacgccggagacggagtccgcagcgaa
cagatctacgtccgcaccaaagaggatgttcccggtcctccagcgggggtgaaggccgcg
gccgccagcggctccgtggtgtttgtctcctggctgcctccgctcaaactcaacggcatc
atcaggaaatacatcgtcttctgctccaacctgcatcctatggtgatgagtgagtttgag
gcgtctccagatgcatatttctacaggatccccaatctggctcgaaacagacagtacagt
atctgggtggtggcggtgacggctgctggtcatggcaacaacagtgacaagatcaccgtg
gagcctctggccaaagctccagccaggattctgaccttcaacgggacagtgaccactccc
tggatgaaggacattgttttaccgtgcaaggctgttggagaccctcctcccaccatcaag
tggatcaaggggaacactaacggcactcccacactcgtccttgtggatggtcgccgtagt
gtccatggcaacggcagcttcatcatccgcacggtgaaagcagaggattctgggaactac
agctgcgttgccagcaacaactggggatccgacgagattacactcaacctgcaggtccaa
gtgcctcctgaccagccacgcctcactgttaccaagacaaccaccacatcaatcacgttg
tcatggatacctggagacaacggaggaagctccatcagaggctacatcctgcagtactca
gaggacaacagcgagcagtggggcagttttcccatcagccccagcgagcgctcgtaccgc
ctggagaacctgaagtgcggcacctggtataaattcaccctgacggcccagaatgcagtg
gggccggggcacatcagtgagatcattgaagcaaagacccatgggaaagagccgcagttt
gccaaagatcatgaactcttcaccagcattaactccacccgggcccggctcaatctggtg
ggctggaacaacggcggctgtccgatcacctccttcatcctggagtaccgcgccgtggac
ctggccacctggaccacggcgcagcgcacctcgctcaccaagagctacgtcctgtacgac
ctgcaggaggccacctggtacgagctgcagatgaaggtcaccaacagcgccggctcagcg
gaaaagaggatcaccttcgctactctcaacgccgatggaagtaccatcccccccctgctg
aaaacaggagaccccatctcagacaacatgtcgggcagcggcggtctgaagatggtggtc
accctcacgtctgccctggtggtggccgtgctcgtcttcatcatgctcatggtgctgaag
aggaggcggagggagcagaggctcaagaggctcagagatgccaagagcctggcagaaatg
ctgatgagtaagaacactcgcactccagacacggtgaacaagcagcagcagacgttacgg
atgcacatcgatatcccccgagcccagctgctcatcgaggagcgggacaccatggagaca
atcgatgacaggtccactgtgctgttgacagacaatgacttcggggagacgaacaagcag
aagtcgtccacggtgacgcacacggtccactaccagtctctgtcccaggccaccgggccg
ctggtggacgtgtccgacgccaggcccggaaccaaccccactgccagacgcactgccaaa
gccggtcctgccgcgacgcggagccgatacgccagccagtggacactgaaccggccgcac
cccaccagctcctcccacacgctgaccaccgactggaggctgccgacgccccgagccacc
gggtccgtggacaaggagagcgacagctacagcgtcagcccctcacaggacacagatcgt
gcgaggagcagcatggtttccacagagagtgcgtcctccacctacgaggagcttgccaga
gcctacgagcacgccaagatggaggagcagctccgccacgccaagttcaccatcaccgag
tgcttcatctccgacacttcctccgagcagatgacagcagggactaacgactacaccgac
agcgtggcctccagcacgccgtccgagtccggcatctgccgcttcaccgcctcgccgccc
aaacctcaggatgtcagtcgggtcatgactatggccgtgcccaaggcccacagacctgca
ggagagctggtccacctgcctccttacctccgtatggacttcctgttgaaccggggcgtg
ccgcctcgaggtggaggcgtcagctgcagcagcggcagcagcataggagcaggaggagga
ggaggaggaggggggnngggaggaggaagtggtgcatcgggggagacaagaggagtggga
ggaggagccatgggccagacctgcctggagccccagaggagccgcaccctgaagaggccc
ccgcccatggagcccacccccatggaagtgccgtcacccagggaggtgcagcagtggcag
ccaggaaccgcctccaccctcccccacagggatgcccgggagaggggggaggcgcggggg
gaggtccgggcggacgctccctcctcgggggacctggcccaagcacaggctgccaagctc
agcacctcccaggagtccctgctggactccagaggacacctgaaacagagcaacaacccc
tacgccaagtcctacactctggtataa
DBGET
integrated database retrieval system
