Pseudochaenichthys georgianus (South Georgia icefish): 117457725
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Entry
117457725 CDS
T09629
Symbol
six5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117457725 (six5)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117457725 (six5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117457725
NCBI-ProteinID:
XP_033953832
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Position
13:complement(24641580..24648952)
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AA seq
914 aa
AA seq
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MASLSLESTEQSENSPEEPTATEFKEDKDPVHISEQLLQSFQNSSLSFSTDQVSCLCEAL
LQAGNVDRLWRFLSTIPPSSELLRGNETMLKAQALVAFHRDEFKELYAILDSYAFHPSNH
GFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNALK
DCYKSNRYPTPDEKKNLAKVTGLSLTQVSNWFKNRRQRDRTPPGTHSKSESDGNHSTDDE
GSPMDDGPDKPEEVSSSTASIISLSAVPCSAGGQLFLNGSGGFLTASQPLLLNGNSILSS
TGAGVIINGLSLGDCQTVTLSPVGSNSPLILNGAQVITKTSLHQQQAISITPQEVLSMEA
KQSSLLSTNTSPVSVISLPLQTKTDGGNAMNFISVPESEGSIQTVSSSSSSLSPSSPTLS
SPTSLPSLVLAQIPQRHESLPVSMSSAGMVISSSALPFSSQHGEYVVFTSAGSHLNPSSS
LVSSSSCSPQVFSLPQVVPSIQGIPVSQLVQHSSGATVSQCPQLVPVSSLTSLASQFLNH
TVNTSTRLHQDALSTLPEGATTIVSISQLNNQLQQSTNSSTSTIQVPQLISISSPTQVVP
KASTAAQLVPLSMPQLVPVSPIQTSSSISFPQVVPASPSLSIPSAGLPLQILTSAHGGVA
QGPLRINQLRPLQNVGHQTNMAPGVQLLNSGIIQLPSAAPGNLLLGGSPYLSVHEGKLIL
TIPAGIQLTSLPLKPVPEALPIYANGLSQLLTPSTPPVVSSTSGPTHFTSSTLNFINSTP
PYCAPETGTPSIPALDHTVTSTAPNTLTPESMLTLSPMYSGGTPNIQLSQPVWSPMPLST
SASLTLFDVRGKGDLHVDPALLGLPGGESLLQGSPSSEQDVETSSALGDPEEMDGDTKIL
TQLQSVPVDDDLGL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtctacagaacaatccgagaacagcccagaggagccgacg
gccacggagttcaaagaagataaagatccggtgcacatttcggaacaattgctccaaagt
tttcaaaactcgtctttgagtttttccactgaccaagtatcatgtctgtgcgaggccctc
ctgcaggcgggcaatgtggatcgcctgtggagatttctttccaccatacctccttcgtcc
gagctgctacgtggcaacgagaccatgctgaaggcccaggcactggtggctttccaccgg
gacgaattcaaggagctgtacgccatcctggatagctacgccttccacccgtctaaccat
gggttcctgcaggacctgtacctgaaagcccgctacaaggaggcggagaggtcgcggggc
cgcagcctgggcgcagtggacaagtaccggctcaggaagaagtttccccttcccaaaacc
atctgggacggagaggagaccgtgtactgctttaaagaaaagtccagaaatgccctgaaa
gattgctataagagcaacaggtaccccactccggacgagaagaaaaacctggccaaagta
accggactgtccctcacccaggtcagcaactggttcaagaaccgcaggcagagggacagg
accccgcccgggacacacagcaaaagtgaatctgatgggaaccacagcaccgatgacgag
gggagccccatggacgacggccctgacaaaccagaggaggtttccagttccacggcctcc
atcatctctctctctgccgtcccctgcagcgccggaggccagctcttcctcaacgggtcc
ggtggcttcctcacagcctctcagccgttactacttaatggaaattccatcctctccagt
actggtgctggtgtcataattaacgggctgagcttgggcgattgccagacagtcacactg
agtcctgttggatccaactctcctttgattctgaacggggctcaggtaataaccaaaact
agtctgcatcagcagcaagccatttccatcacaccgcaggaggttttgtccatggaggcc
aagcagagcagtcttcttagcactaacacctccccggtctccgtcatctctcttcccctg
caaaccaaaacagacggcggcaatgcaatgaatttcatcagcgtccctgaatcagagggc
agcatccagacagtatcttcctcttcttcatctttatctccttcctcaccaactctgtcc
tcccccaccagtctcccctcactagtcttagcacaaatcccccagcgccacgagtctctc
ccggtctccatgtcgtccgcaggcatggtgatctccagttctgccctgccgttctccagt
cagcatggggagtatgttgtttttacctccgctggctcccacttaaacccttctagctct
ttggtttccagcagcagctgctcccctcaggtcttctctctgccccaggtcgtgccttcc
atccagggtatcccagtgtcccagctggtgcagcactcttcaggagccacagtgtcccaa
tgccctcagttagtcccagtttcctccctcacctcattagcttctcagttcctaaaccac
acagtgaacactagcaccagactgcaccaggatgctttaagtactctgcctgaaggtgcc
accactatagtctctatctcacagcttaacaatcagctccaacaaagcacaaactcctct
acgagcacaatccaggtcccacagcttatatccatttcttccccgacacaagtagtgccc
aaagcctccacagcagcacagttagtccccctctccatgcctcagctggtccccgtctcc
cccattcaaacttcctcctccatctctttcccccaagtggttcctgccagtccttctctg
tccatcccctctgctggactgcccttacaaatcctgacctcagcccatggaggggtcgct
caggggcctcttaggataaaccagctgaggcccctgcagaatgtgggtcaccaaaccaac
atggccccgggtgtgcagctcctcaactctgggatcattcagctgccctctgctgctcca
ggtaaccttctgctcggtgggagcccttacctgagtgtccacgaaggcaaactgatcctg
accatcccagccggcatccagctcaccagcctgccactgaaaccggtcccggaggcgtta
cccatctatgcaaatggcttgagtcaacttctcaccccctccacccctcctgtagtctct
tccacctcaggcccgacccactttacatcatccaccctaaacttcatcaactctactcca
ccgtactgtgctccagagacggggacaccctccatcccggctttagatcatacagtcacc
tctacagctccaaacactctcactccagagagtatgcttaccctcagtcccatgtacagt
ggggggacacccaacatccagctgtcccagcccgtctggagccccatgcccctctccacg
tcagctagtctaactctgtttgatgtccgcggaaagggggacctacatgtcgacccggct
ctgttggggcttcctggaggagagtcgctgctccagggaagcccctcgtccgagcaggat
gtggaaaccagctctgctctgggggatccagaggagatggacggggacaccaagatactc
actcagctgcagtctgtccctgtggatgatgacctgggcttgtag
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