Pseudochaenichthys georgianus (South Georgia icefish): 117457759
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Entry
117457759 CDS
T09629
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117457759 (ddx4)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117457759 (ddx4)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117457759 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
117457759
NCBI-ProteinID:
XP_033953880
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Position
2:complement(3141415..3149246)
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AA seq
622 aa
AA seq
DB search
MDEWNEGTTSNTTTVTSQSSEGTQGDSWNSDRGKYGRGGGGRGGFQSSFSGGGNSEDRSG
FRGRGGRGGGRGFDRADRSESNGEEGGGFGGGSRGRGGRGGFRQGGDDEPRGGGSGGGYR
GRDEDYFARGDSKDPEKKDGEEERPRITYVPEALPEDEASIFAHYEKGINFAKYDDITVD
VSGSNPPPAIMTFEEAALCESLRKNVSKTGYVKPTPVQKYGIPIISAGRDLMACAQTGSG
KTAAFLLPILQQLMADGVAASSFSELQEPEVIIVAPTRELINQIYLEARKFAFGTCVRPV
VVYGGVATGHQIRDVLKGCNVLCGTPGRLLDVIGRGKIGCSKLRYLVMDEADRMLDMGFE
PDMRRLVASSGMPTKENRQTLMFSATFPEDIQRLAADFLKTDYLFLAVGVVGGACSDVEQ
KLVQVTKFSKREKLLDVLKTTGTERTMVFVATKRQADFIATYLCQENVLTTSIHGDREQR
EREQALADFRSGRRTVLVATSVAARGLDIPDVQHVVNFDLPDNIDEYVHRIGRTGRCGNT
GRALSFYDPEADGQLARFLVTILSKAQQEVPSWLEESAFSGSGSEGFKGFNSTDSRKGAS
SADSGAKSQAAAVPAAEDEEWE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatggaatgagggaactactagtaatactactacagtaaccagccaatcaagt
gaaggtacacaaggtgactcctggaactctgacagggggaaatatggaaggggtggtgga
ggcagaggaggattccaaagctcattctcaggtggtggaaattcggaagacaggagtgga
tttagaggtagaggaggcagaggcggtggaagagggtttgacagggcggatcgcagtgaa
tcaaatggagaggaaggtggagggttcggaggcggaagccgaggaagaggcggcagagga
ggtttccgacaaggtggagacgatgaacccagaggaggaggctcaggaggaggctaccga
gggagagatgaggattactttgctcgaggcgattctaaagatccagaaaagaaagatggt
gaagaagaaagaccaaggatcacgtatgttcctgaagcactccccgaagatgaagcatcc
attttcgcccactatgagaaaggcatcaactttgcgaagtatgatgacatcacagtggat
gtcagtggaagtaaccccccgccggctatcatgacttttgaggaggcagcattgtgcgag
tcacttagaaaaaatgtcagcaaaactggttatgtgaagcccacccccgttcagaagtat
ggcatccccatcatctctgctggcagagatctcatggcctgtgcccagactggatctggt
aaaacggctgctttcctcctgcctatcttgcagcagctgatggcagacggcgtggcagcg
agttccttcagtgagctgcaggagcccgaggtcatcattgtggcccccaccagggagctc
atcaatcagatttacctggaggccaggaagtttgcctttgggacatgtgtgcgtccagtt
gtggtttatggtggagtcgccactggacaccaaataagagatgttctgaaggggtgcaat
gtgctgtgtggaacacctgggagactgttggatgtcattggaagaggaaagattggctgc
agtaagctgcggtacctggtgatggatgaggctgaccggatgttggatatgggctttgag
cctgacatgcgtcgcttagtggcctcgtctggcatgcctaccaaagagaaccggcagact
ctaatgttcagcgccaccttccctgaggacatccagaggttggcggccgacttcctgaag
acagactatctgttcctggctgtgggtgtggtgggcggagcctgcagtgatgtggagcag
aagcttgtccaggtcaccaagttctccaagagggaaaagctgcttgatgttctcaaaacc
actggaactgaacgcaccatggtttttgtggcgaccaagagacaagctgatttcatcgcc
acttacctgtgccaagagaatgttctgaccaccagcattcatggtgaccgtgagcagcgg
gagcgagagcaggctctggcagactttcgctccggcagacggacagtcctggtggccacc
tctgtagctgcccggggtctggatattccagatgtgcagcatgtggtcaactttgacctc
cctgacaacattgacgagtatgtccaccgtatcggtagaaccggtcgctgcgggaacact
gggagggccttgtctttctatgaccccgaagctgatggccaacttgcccgcttcctcgtt
accatcctgtccaaggcccagcaggaagtgccctcctggctggaagagtctgcgttcagc
ggctccggatctgaaggcttcaagggcttcaactccacagactccaggaagggagcatca
tccgctgacagcggagcgaagagccaggccgctgctgtacctgctgcagaagatgaagaa
tgggaatag
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