Pseudochaenichthys georgianus (South Georgia icefish): 117457851
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Entry
117457851 CDS
T09629
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117457851 (dhx34)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117457851 (dhx34)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117457851 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
ResIII
Motif
Other DBs
NCBI-GeneID:
117457851
NCBI-ProteinID:
XP_033953985
LinkDB
All DBs
Position
13:complement(12480995..12495466)
Genome browser
AA seq
1139 aa
AA seq
DB search
MASDRRRDSRSWDWDSPQCRAQLDEVFFRRHDYIQAGSTEHREFWAFFDRFQRFKTRKEM
SGPGAKEDRSKPGSGKVDLGLPKEYDARYRINVSVCTLDVEERMGKSEHRGSQRSSGPGS
QEISDCRLALLHFLDFSQRQSFGKLAKLRREQKNLPIFQYRDRIVELVRKSPVLVVAGDT
GCGKSTQVPQYLLAAGFNHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETTKT
PSTKLLFLTEGLLLRQIQQDRSLSQYQVLIVDEVHERHLHCDFLLGVLRSLLAETPELRL
ILMSATINIKLFSDYFSGAPVLQVPGRLFPIQVLYQPIPPDELPSRSEKLDPRPYLRILQ
GIDQRYPPEERGDLLIFLSGVQEISTVQEACQVLATHTRRWIVLPLHSTLSLAQQDKVFD
ISPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQ
RKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMSLGDPLSFVFID
PPPAASIQTAVTYLKEQGALDSRSDLTSIGTLLAQLPVDVVIGKMLVLGSLFNLVDPVLT
VAAALSVQSPFLRSAQHNPDCTTARQPLHSNHGDPFTLLNTFNAWVEVKGERGGGSRKWC
RRRGMEEQRLYEMVNLRRQFKELLRSHGLLEIQSSAPSGGDRVQRRQRLTERKKLHQMKR
DHEQQESGRRKVLRLEEGQEEFSSGSDAEGAGRGKKDDQAGQNVDIQEVKFKLRHNVSEL
QEAASVSQDMSSRQQALLKLLLCRGLYPQLALPDEHNSTRKDSEQVFHTRNKQGVVIHPT
SVFATDPEVLQVPEGDGDMGPERRDSSRHQLLAFVTLLETNKPYLSNCVRVPALQALLLV
ANSVDSNADCTRLVVDGWLELELREAGEALKVLSTALTLRGEWERLLLAQLAQSTMGPEQ
GVSRKVLEKLSEGLVRFLLYTEITYSLRRLTAFQTQNLYVGPRPQEPAPEGNPLFPGVEA
KPDPIKGGLRVTSFFTYNCLTDSKDLYSECLRTFWSCPNCDLYMPLTPLERMQHEASCRP
AGEQQQSEEEPEGAKAVSSSSSSMSSLTRVYHCDVCDEDLTLTSTEILKHKRQHMYSTK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagaccggcggagggacagccggagctgggactgggacagcccgcagtgcaga
gcccagctggacgaggtctttttccgccggcatgactacatccaggccggcagcacggag
cacagagagttctgggctttctttgaccgtttccagaggtttaaaacaaggaaggaaatg
tctgggccaggagccaaagaggacaggagtaagcctggctctggaaaggtagacctcgga
ctccctaaagagtatgatgcccggtacaggattaatgtgtctgtgtgcaccctggatgtg
gaggagcgcatggggaagtcagagcaccgaggcagccagagatcctcaggaccaggcagt
caggagatctcagactgccgcctggctctgctgcacttcctggacttcagtcagagacag
agttttggaaagctggccaagctccgccgggagcagaagaaccttcccatcttccagtac
cgggaccggatcgtggagctggtgcgaaagagccctgtgttggtggtggcaggggacaca
ggctgtgggaaatccacccaagtccctcagtatcttcttgcagctggcttcaaccacatt
gcctgcactcagcctcggcggattgcctgtatatccctcgccaagagggtcagctttgaa
agtctcaatcagtacggctctaaggtggggtaccagatccgcttcgagaccacgaagacc
ccgtccaccaaactgctgttcctgacagaggggctgctgctccggcagatccagcaggac
cggtccctctctcagtaccaggtgttgatcgtggacgaggtccatgagagacacctccac
tgcgacttcctcctgggggtcctgcgctctctgctggcagaaaccccagaactgcgtctc
atcctcatgtccgccaccatcaacatcaaactgttctccgactacttcagcggcgctcct
gtgctgcaggtaccaggccggctgtttcctatacaggtgttataccagcccattccccct
gacgagctgccctctcgttcggagaaactggatcccagaccttacctgcgcatcctgcag
ggcatcgatcagcgctacccccccgaggagcgcggcgacctgctcatcttcctgagcggg
gtccaggagatctccaccgtccaggaggcctgtcaggttctggccacacacacacgccgc
tggatcgtcctgccgctgcacagcacgctctctctggcccagcaggacaaggtgtttgac
atttctcctcctggggtgagaaagtgcatcatctccaccaatattgctgagacgtccgtt
accatagatggagttcgcttcgttgtagactcagggaaggttaaggaaatgagttttgac
cctaaggccaagatgcagcgtctgcaggagttctggatcagcagagccagctctgagcag
aggaaaggtcgagccgggcgcacaggtccaggagtttgctaccgcctgtacgcagagtct
gactacgacgcattcgctccttatcctgtgcctgaaatccacagagtggctctggactcg
ctcatccttcagatgaagagcatgagtcttggagatccactttcttttgtcttcattgat
cctccccctgctgctagtatccagactgcagttacttatctgaaagagcagggggcactg
gacagccggtctgacctgacctctatcggtaccctgctggcacaactgcccgtggatgta
gtcatagggaagatgctggtgctgggctctctgtttaacctggtggaccccgtgttgacg
gtggcggcggccctcagcgttcagtcgcccttcctgcgcagcgcccagcacaacccagac
tgcaccaccgcccgccagcccctgcacagcaaccacggagaccccttcaccctgctcaac
accttcaacgcctgggtggaggtgaaaggagaaagaggtggaggctccaggaagtggtgc
aggaggagaggcatggaggagcagaggctctatgagatggtcaacttacggagacagttc
aaggagctgctgaggagccacggcctgctggagattcagagcagcgctccctctggtgga
gaccgcgtgcagcgcaggcagaggctcactgagaggaagaagctgcatcagatgaagaga
gaccacgagcagcaggagagcggccggcgcaaagtcctgaggctggaggaggggcaggag
gagttcagctcggggtccgacgcagagggggccggcaggggcaagaaggacgaccaggca
ggacagaacgtggacatacaggaggtgaagttcaagttgcgtcacaacgtgtcggagctg
caggaggcggcgagcgtcagtcaggacatgtcctcccgtcagcaagctctcctcaagctg
ctgctctgccgcggcctctaccctcagctcgctctgcccgatgaacacaactccacccgc
aaggactcggagcaggtgttccacacaaggaataagcagggagtggtgatccacccgacc
agtgtgttcgccaccgaccccgaggtgttacaagtgcctgagggggacggagacatgggg
cctgagcggagggacagcagcagacaccagctgctagccttcgtcactctgttggagacc
aacaagccgtatttgtccaactgtgtgcgggtaccagcgctgcaggctctgctgctggtg
gccaacagtgtggacagtaacgctgactgcacgcggctggtggtggacggctggctggag
ctggagctgagggaggcgggggaggccctgaaggtgctgtccaccgccctcaccctccgg
ggggagtgggagcgcctcctgctggcccagctggcgcagagcaccatggggccagagcag
ggggtctcccgcaaagtcctggagaagctgagcgagggcctggtccgcttcctgctctac
actgagatcacgtacagcctgcggcgcctcacagccttccagacccagaacctgtacgtg
ggcccccggcctcaggagccggccccagaggggaaccctctgttcccaggggtggaggcc
aagccggaccccatcaaaggaggcctgcgcgtcaccagcttcttcacctacaactgcctc
actgactcgaaggacctgtacagcgagtgtttacgcaccttctggagctgtcctaactgt
gacctctacatgcctctcactccgctggagcgcatgcagcacgaggcctcctgcaggccg
gcaggggaacagcagcagtcagaggaagagccagaaggggcaaaggcagtctcctcctct
tcctcctccatgtccagtctcaccagagtgtatcactgtgacgtctgcgatgaagatctg
accctcacctccactgagatcctcaaacataaaaggcagcacatgtattctaccaagtag
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integrated database retrieval system
