Pseudochaenichthys georgianus (South Georgia icefish): 117457872
Help
Entry
117457872 CDS
T09629
Symbol
tsku
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117457872 (tsku)
Proteoglycans [BR:
pgeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
117457872 (tsku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_NXF1-5
LRR_6
LRRNT
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117457872
NCBI-ProteinID:
XP_033954016
LinkDB
All DBs
Position
13:34583171..34594200
Genome browser
AA seq
348 aa
AA seq
DB search
MALLLCLGLSLLASVQSSNVKNCHHGCHCEVESFGLFDSFSLTRVDCRGLGPGTTMPIPI
PLDTSHLDLSSNTMGPLTDTMLSGPGYTTLVSLDLSSNLITTITANVLSKLRYLETLDLS
HNNLQSLSLGCFSGLPLAEVDLSHNSFQEFDMDVFATKVNGEPVSVDLSHNRLVSVSTTL
RGRELHIQTLNLSANRLLSVPALAGLPLRYLNLDGNPITQIKEGAFAQLKNLVYLSISGL
QDLHEIMPNSFTGLLSLQVLDLSNNPKLKTLSPAVFSGLDSLLELNLSGSAVVSLPNNML
THLPSIKSITLGRSIQCWRTQKQGQFHRQLGQVQHNEVLSCNVEGVVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctcctttgccttggcctgtcgctgctggcctctgtccagtccagcaacgtc
aagaactgccaccacggctgccactgtgaggtggaaagcttcggcctgttcgacagcttt
agcctgaccagggtggactgtcgggggctgggacccgggaccaccatgcctatccccatc
ccactggacacctcccacctggacctgtcctccaacaccatgggcccgctcaccgacacc
atgttgtccggtccaggctacaccaccctcgttagcttggacctcagcagcaaccttata
acaacgataacagccaatgttctgtccaagctgcgttacctggagactctggatctgagc
cacaacaacctgcagagcctctctctcggctgtttctccggcctcccattggctgaagtt
gacctcagccacaacagcttccaagagtttgacatggacgtgttcgccaccaaagtaaat
ggtgagcctgtcagcgtggatctgtctcacaacaggcttgtgtcagtctccacgactttg
cgtgggagagagctgcacattcaaaccttgaatctgtcagcaaaccggctgctgagtgta
ccggcgctggcaggacttccgctgaggtacctcaatctggatggtaaccccatcacacag
atcaaggagggagcttttgctcagctgaaaaatctagtttatttatccatcagtggcctc
caggaccttcacgagatcatgccaaacagcttcacgggcctcctaagcctgcaagtactg
gatctctcaaacaaccccaagctcaagactttaagccccgcagttttcagcggactggac
tccctgctggaactgaatttatctggctctgctgtggtgtccttgccaaataacatgctg
acacacctgcccagcattaagagtatcacattagggcggagcatccaatgctggaggaca
cagaaacagggacagttccaccggcagcttggacaggtccaacacaacgaggtgctcagc
tgtaatgtggagggcgtcgtgttgtag
DBGET
integrated database retrieval system
